© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9454 |
| Gene name | |
| Location | Contig_69:18174..18951 |
| Strand | - |
| Gene length (bp) | 777 |
| Transcript length (bp) | 777 |
| Coding sequence length (bp) | 777 |
| Protein length (aa) | 259 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 3.1E-12 | 44 | 149 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.4E-08 | 45 | 151 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 9.0E-06 | 9 | 152 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.7387 | 0.5478 | 0.0971 | 0.0935 | 0.1006 | 0.0234 | 0.0595 | 0.1072 | 0.1535 | 0.0012 |
| Orthofinder run ID | 4 |
| Orthogroup | 696 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9454 MATDHKIQFNSVAQEYQMYHQLPMAQLVAELIGKGLGDCNKTRILDLAGGSGHFARQAIDAGAERVDVVDTSMSM MEVGKAIETKLGREGRIHWHCADASLPLWQQGIDILPEGQYDIVMANWLLDHAYSVQDLEGMWQNIAAGLKPGGT FLGVRVTEPGMLGGTGAEGKYGAKLEEFENIPGGVKYRATIQCEPSFAFQAASMEDSYNMTDKIPRKLGITDFEV LAIEDTEVFKKDPEFWKQHQEKPVYTTVMARKR* |
| Coding | >Hirsu2|9454 ATGGCAACAGATCACAAGATCCAATTCAACAGCGTTGCGCAGGAGTACCAGATGTACCACCAACTGCCCATGGCA CAGTTGGTAGCGGAACTCATCGGCAAAGGCCTCGGAGACTGTAATAAAACCCGCATTCTTGACCTTGCGGGCGGC AGCGGCCACTTTGCCCGCCAGGCAATAGACGCCGGCGCAGAGCGTGTCGACGTCGTCGACACGTCCATGTCCATG ATGGAAGTCGGCAAGGCGATAGAGACGAAGTTGGGCCGCGAGGGGCGCATTCATTGGCACTGCGCGGATGCCTCC CTGCCGTTGTGGCAGCAGGGCATCGATATACTCCCCGAGGGGCAATACGATATCGTCATGGCGAATTGGCTCTTG GACCACGCATATAGCGTCCAAGACCTCGAGGGTATGTGGCAAAACATCGCCGCCGGCCTCAAGCCCGGTGGCACG TTTCTGGGCGTCCGGGTGACTGAGCCTGGCATGCTCGGTGGCACTGGCGCGGAAGGAAAATATGGCGCAAAGCTC GAAGAGTTTGAGAATATCCCAGGAGGGGTGAAATATCGAGCCACGATACAGTGCGAGCCGTCTTTTGCCTTCCAG GCGGCGTCGATGGAAGATAGCTACAATATGACCGACAAGATACCACGGAAGCTGGGCATCACAGACTTTGAAGTT CTCGCCATCGAGGACACAGAGGTCTTCAAAAAGGATCCGGAGTTTTGGAAACAGCACCAAGAAAAACCAGTCTAT ACCACTGTGATGGCGAGAAAGCGTTGA |
| Transcript | >Hirsu2|9454 ATGGCAACAGATCACAAGATCCAATTCAACAGCGTTGCGCAGGAGTACCAGATGTACCACCAACTGCCCATGGCA CAGTTGGTAGCGGAACTCATCGGCAAAGGCCTCGGAGACTGTAATAAAACCCGCATTCTTGACCTTGCGGGCGGC AGCGGCCACTTTGCCCGCCAGGCAATAGACGCCGGCGCAGAGCGTGTCGACGTCGTCGACACGTCCATGTCCATG ATGGAAGTCGGCAAGGCGATAGAGACGAAGTTGGGCCGCGAGGGGCGCATTCATTGGCACTGCGCGGATGCCTCC CTGCCGTTGTGGCAGCAGGGCATCGATATACTCCCCGAGGGGCAATACGATATCGTCATGGCGAATTGGCTCTTG GACCACGCATATAGCGTCCAAGACCTCGAGGGTATGTGGCAAAACATCGCCGCCGGCCTCAAGCCCGGTGGCACG TTTCTGGGCGTCCGGGTGACTGAGCCTGGCATGCTCGGTGGCACTGGCGCGGAAGGAAAATATGGCGCAAAGCTC GAAGAGTTTGAGAATATCCCAGGAGGGGTGAAATATCGAGCCACGATACAGTGCGAGCCGTCTTTTGCCTTCCAG GCGGCGTCGATGGAAGATAGCTACAATATGACCGACAAGATACCACGGAAGCTGGGCATCACAGACTTTGAAGTT CTCGCCATCGAGGACACAGAGGTCTTCAAAAAGGATCCGGAGTTTTGGAAACAGCACCAAGAAAAACCAGTCTAT ACCACTGTGATGGCGAGAAAGCGTTGA |
| Gene | >Hirsu2|9454 ATGGCAACAGATCACAAGATCCAATTCAACAGCGTTGCGCAGGAGTACCAGATGTACCACCAACTGCCCATGGCA CAGTTGGTAGCGGAACTCATCGGCAAAGGCCTCGGAGACTGTAATAAAACCCGCATTCTTGACCTTGCGGGCGGC AGCGGCCACTTTGCCCGCCAGGCAATAGACGCCGGCGCAGAGCGTGTCGACGTCGTCGACACGTCCATGTCCATG ATGGAAGTCGGCAAGGCGATAGAGACGAAGTTGGGCCGCGAGGGGCGCATTCATTGGCACTGCGCGGATGCCTCC CTGCCGTTGTGGCAGCAGGGCATCGATATACTCCCCGAGGGGCAATACGATATCGTCATGGCGAATTGGCTCTTG GACCACGCATATAGCGTCCAAGACCTCGAGGGTATGTGGCAAAACATCGCCGCCGGCCTCAAGCCCGGTGGCACG TTTCTGGGCGTCCGGGTGACTGAGCCTGGCATGCTCGGTGGCACTGGCGCGGAAGGAAAATATGGCGCAAAGCTC GAAGAGTTTGAGAATATCCCAGGAGGGGTGAAATATCGAGCCACGATACAGTGCGAGCCGTCTTTTGCCTTCCAG GCGGCGTCGATGGAAGATAGCTACAATATGACCGACAAGATACCACGGAAGCTGGGCATCACAGACTTTGAAGTT CTCGCCATCGAGGACACAGAGGTCTTCAAAAAGGATCCGGAGTTTTGGAAACAGCACCAAGAAAAACCAGTCTAT ACCACTGTGATGGCGAGAAAGCGTTGA |