© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9431 |
| Gene name | |
| Location | Contig_687:211..580 |
| Strand | + |
| Gene length (bp) | 369 |
| Transcript length (bp) | 369 |
| Coding sequence length (bp) | 369 |
| Protein length (aa) | 123 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.6134 | 0.53 | 0.4778 | 0.2283 | 0.1384 | 0.1181 | 0.1654 | 0.1276 | 0.0625 | 0.059 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 10916 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|9431 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9431 MTDALGRASAAGLVFFCSSSAAGLVVFSFCSSVVPAIAAADDEGGPGVAGGDVIGRAPDGEDGRDEDEDNRRRRA VTRERPDRGGLARLCRSGPAPSGKGPRVEETRAQRPTTMADIGARRW* |
| Coding | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |
| Transcript | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |
| Gene | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |