Protein ID | Hirsu2|9431 |
Gene name | |
Location | Contig_687:211..580 |
Strand | + |
Gene length (bp) | 369 |
Transcript length (bp) | 369 |
Coding sequence length (bp) | 369 |
Protein length (aa) | 123 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.6134 | 0.53 | 0.4778 | 0.2283 | 0.1384 | 0.1181 | 0.1654 | 0.1276 | 0.0625 | 0.059 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 10916 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|9431 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9431 MTDALGRASAAGLVFFCSSSAAGLVVFSFCSSVVPAIAAADDEGGPGVAGGDVIGRAPDGEDGRDEDEDNRRRRA VTRERPDRGGLARLCRSGPAPSGKGPRVEETRAQRPTTMADIGARRW* |
Coding | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |
Transcript | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |
Gene | >Hirsu2|9431 ATGACCGACGCGCTCGGCCGCGCCTCCGCCGCCGGCCTCGTCTTCTTCTGCTCCTCCTCCGCCGCCGGCCTCGTC GTCTTCTCCTTCTGCTCCTCCGTCGTGCCCGCCATCGCTGCCGCCGACGACGAGGGCGGCCCGGGCGTTGCCGGC GGTGATGTCATCGGCCGTGCGCCCGACGGGGAAGATGGCCGCGACGAGGACGAAGACAACCGCCGCCGCAGAGCC GTGACGAGGGAGAGGCCGGACAGAGGAGGCCTCGCGCGCCTATGCCGGTCGGGTCCGGCGCCTAGCGGAAAGGGG CCGAGGGTAGAGGAAACGCGAGCCCAGCGTCCGACGACGATGGCAGACATTGGCGCGCGCCGGTGGTGA |