Protein ID | Hirsu2|9429 |
Gene name | |
Location | Contig_685:12542..13563 |
Strand | + |
Gene length (bp) | 1021 |
Transcript length (bp) | 951 |
Coding sequence length (bp) | 951 |
Protein length (aa) | 317 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.265 | 0.1409 | 0.7218 | 0.1987 | 0.3707 | 0.0025 | 0.1921 | 0.2407 | 0.069 | 0.0019 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999573 |
Orthofinder run ID | 4 |
Orthogroup | 332 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9429 MKATFSAALLLAALAQANEQQAQAPQAAQVPQVPQAPQAPQAPQAPQAPQAPQVPQAGYGGGYGGGDYEGGREEG GYEGGREEGGREGGIGGGRGGIGGGRGGIGGGIGGGEGGYHGIDPNNRGPIPEGVKKLGKDIARFAGCFLERSWR EARHIDCGACHKDNYEEETIVTCVCSNQDKLAHLIRRNFNVCVDSRVAFSGVVREIGADIGGLGLSALCGAYEGG RYHGGRGGHLGGGHIGGGGVGIGGGHGGIGGGKGGLGGGHGGIGGXXXXXXXXXXXXXXXXXXXXGGAGAGAGGA GGYGGDKAYGGGKDDY* |
Coding | >Hirsu2|9429 ATGAAGGCCACGTTCTCCGCCGCTCTCCTCCTCGCCGCCCTCGCTCAGGCCAACGAGCAGCAGGCGCAGGCCCCG CAGGCCGCCCAGGTGCCTCAGGTGCCCCAGGCTCCCCAGGCTCCCCAGGCTCCTCAGGCTCCTCAGGCTCCTCAG GCTCCCCAGGTGCCTCAGGCCGGTTACGGCGGCGGCTATGGCGGCGGCGACTATGAGGGCGGACGCGAGGAGGGC GGCTACGAGGGCGGACGCGAGGAGGGCGGCCGCGAGGGCGGCATCGGCGGCGGTCGCGGCGGCATCGGTGGTGGC CGCGGCGGCATCGGCGGCGGCATCGGCGGCGGCGAGGGCGGCTACCACGGCATCGACCCCAACAACAGGGGCCCG ATTCCGGAGGGCGTCAAGAAGCTGGGCAAGGACATCGCGCGCTTCGCCGGCTGCTTCCTGGAGCGCTCGTGGCGC GAGGCGCGGCACATCGACTGCGGCGCCTGCCACAAGGACAACTATGAGGAGGAGACCATCGTGACCTGCGTCTGC TCTAACCAGGACAAGCTGGCCCACCTGATCCGCCGCAACTTCAACGTCTGCGTCGACAGCCGCGTCGCCTTCAGC GGCGTCGTCCGCGAGATCGGAGCCGACATCGGTGGCCTTGGCCTCAGCGCCCTGTGCGGCGCTTACGAGGGCGGA CGCTACCACGGAGGCCGCGGCGGCCACCTCGGCGGCGGCCACATTGGCGGTGGTGGTGTCGGCATCGGTGGAGGC CACGGCGGCATCGGCGGCGGCAAGGGCGGCCTCGGCGGCGGCCACGGCGGCATCGGCGGCNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGGTGCCGGTGCCGGTGCTGGCGGCGCC GGCGGCTACGGCGGCGACAAGGCCTACGGCGGCGGCAAGGACGACTACTAG |
Transcript | >Hirsu2|9429 ATGAAGGCCACGTTCTCCGCCGCTCTCCTCCTCGCCGCCCTCGCTCAGGCCAACGAGCAGCAGGCGCAGGCCCCG CAGGCCGCCCAGGTGCCTCAGGTGCCCCAGGCTCCCCAGGCTCCCCAGGCTCCTCAGGCTCCTCAGGCTCCTCAG GCTCCCCAGGTGCCTCAGGCCGGTTACGGCGGCGGCTATGGCGGCGGCGACTATGAGGGCGGACGCGAGGAGGGC GGCTACGAGGGCGGACGCGAGGAGGGCGGCCGCGAGGGCGGCATCGGCGGCGGTCGCGGCGGCATCGGTGGTGGC CGCGGCGGCATCGGCGGCGGCATCGGCGGCGGCGAGGGCGGCTACCACGGCATCGACCCCAACAACAGGGGCCCG ATTCCGGAGGGCGTCAAGAAGCTGGGCAAGGACATCGCGCGCTTCGCCGGCTGCTTCCTGGAGCGCTCGTGGCGC GAGGCGCGGCACATCGACTGCGGCGCCTGCCACAAGGACAACTATGAGGAGGAGACCATCGTGACCTGCGTCTGC TCTAACCAGGACAAGCTGGCCCACCTGATCCGCCGCAACTTCAACGTCTGCGTCGACAGCCGCGTCGCCTTCAGC GGCGTCGTCCGCGAGATCGGAGCCGACATCGGTGGCCTTGGCCTCAGCGCCCTGTGCGGCGCTTACGAGGGCGGA CGCTACCACGGAGGCCGCGGCGGCCACCTCGGCGGCGGCCACATTGGCGGTGGTGGTGTCGGCATCGGTGGAGGC CACGGCGGCATCGGCGGCGGCAAGGGCGGCCTCGGCGGCGGCCACGGCGGCATCGGCGGCNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGGTGCCGGTGCCGGTGCTGGCGGCGCC GGCGGCTACGGCGGCGACAAGGCCTACGGCGGCGGCAAGGACGACTACTAG |
Gene | >Hirsu2|9429 ATGAAGGCCACGTTCTCCGCCGCTCTCCTCCTCGCCGCCCTCGCTCAGGCCAACGAGCAGCAGGCGCAGGCCCCG CAGGCCGCCCAGGTGCCTCAGGTGCCCCAGGCTCCCCAGGCTCCCCAGGCTCCTCAGGCTCCTCAGGCTCCTCAG GCTCCCCAGGTGCCTCAGGCCGGTTACGGCGGCGGCTATGGCGGCGGCGACTATGAGGGCGGACGCGAGGAGGGC GGCTACGAGGGCGGACGCGAGGAGGGCGGCCGCGAGGGCGGCATCGGCGGCGGTCGCGGCGGCATCGGTGGTGGC CGCGGCGGCATCGGCGGCGGCATCGGCGGCGGCGAGGGCGGCTACCACGGCATCGACCCCAACAACAGGGGCCCG ATTCCGGAGGGCGTCAAGAAGCTGGGCAAGGACATCGCGCGCTTCGCCGGCTGCTTCCTGGAGCGCTCGTGGCGC GAGGCGCGGCACATCGACTGCGGCGCCTGCCACAAGGACAACTATGAGGAGGAGACCATCGTGACCTGCGTCTGC TCTAACCAGGACAAGCTGGCCCACCTGATCCGCCGCAACTTCAACGTCTGCGTCGACAGCCGCGTCGCCTTCAGC GGCGTCGTCCGCGAGATCGGAGCCGGTGAGCCTTCTCTTACTTTCCCTCACCCCGATGGTGAAGAAACTTGGCTA ACGAGCAATCGCTCTCCCAGACATCGGTGGCCTTGGCCTCAGCGCCCTGTGCGGCGCTTACGAGGGCGGACGCTA CCACGGAGGCCGCGGCGGCCACCTCGGCGGCGGCCACATTGGCGGTGGTGGTGTCGGCATCGGTGGAGGCCACGG CGGCATCGGCGGCGGCAAGGGCGGCCTCGGCGGCGGCCACGGCGGCATCGGCGGCNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGGTGCCGGTGCCGGTGCTGGCGGCGCCGGCGG CTACGGCGGCGACAAGGCCTACGGCGGCGGCAAGGACGACTACTAG |