Protein ID | Hirsu2|9386 |
Gene name | |
Location | Contig_68:9238..10920 |
Strand | + |
Gene length (bp) | 1682 |
Transcript length (bp) | 1587 |
Coding sequence length (bp) | 1587 |
Protein length (aa) | 529 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13813 | MBOAT_2 | Membrane bound O-acyl transferase family | 3.8E-14 | 337 | 425 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 47 | 19 |
2 | 60 | 79 | 19 |
3 | 83 | 105 | 22 |
4 | 251 | 273 | 22 |
5 | 293 | 315 | 22 |
6 | 390 | 412 | 22 |
7 | 422 | 444 | 22 |
8 | 451 | 473 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9386 MDSLLEETRTSFRTSFLDGLADGRAKPFVIPFSALGSFIVPVVWLAIPHAHRPWLYRTRWIVAAFVVAFNLNVLR WSSSANPGIAYVFGMATAWAAVMNLNHLLWTRPQLEAARALRKGPETVRRREAGDSAVSTGCAPWPPGASSERRI EGKPCARSVEETGSADEAWVWQTFPADAGFLTRLGWAFDLATSIRGGGWNWAISSIPRPRIPARIGPGDAVDLTC MPRRTPSGYEYCLTEGEFLRRRFIKILITYLAVDAVSVCVFRDPYFVVGPDRPYELPPHLRNMPPWLLLAYREML ALVGMISSITLEYNMRDLNSYLVLKLFHPARFALWQYPSAFGSFSHVLDRGLSGWWGAWWHQSFRLSLLAPAKYF SQYLPVERRSRVIDLFTLFASFAMSGSLHAVGSISTMAASKPWKTLLFFLIQAVGIVVQDALAMTIRAVVPKPPR ALARATNFLFTLVFMYATAHLFLDDLASAGLCALDKIPVSPLKWLGLGTGKGHWWRWDYLGTPAWYSGKHWWESG IFI* |
Coding | >Hirsu2|9386 ATGGACAGCCTCTTGGAGGAGACGCGAACCAGCTTTCGAACCTCATTCCTGGACGGGCTCGCCGATGGACGAGCC AAGCCGTTCGTGATTCCGTTCAGCGCACTCGGCTCCTTCATCGTCCCCGTTGTCTGGCTCGCGATCCCGCACGCG CACCGGCCCTGGCTCTACCGGACGCGATGGATCGTCGCCGCCTTCGTCGTCGCCTTCAACCTCAACGTGCTCCGT TGGTCGTCGAGCGCGAACCCGGGCATCGCCTACGTCTTCGGCATGGCGACCGCCTGGGCCGCCGTCATGAACCTC AACCATCTCCTCTGGACGAGGCCGCAGCTCGAGGCAGCGAGAGCGCTGCGGAAAGGCCCGGAGACGGTCCGGCGC CGGGAGGCCGGCGACTCGGCCGTGTCCACCGGCTGCGCGCCGTGGCCTCCGGGCGCCTCGTCCGAGCGCAGGATC GAGGGGAAGCCGTGTGCGCGGTCCGTAGAGGAGACGGGCTCTGCCGATGAGGCGTGGGTTTGGCAGACCTTCCCG GCCGATGCTGGCTTTCTCACGCGTCTCGGCTGGGCGTTCGATCTGGCGACGAGCATTCGAGGCGGAGGCTGGAAC TGGGCCATATCGTCGATCCCCCGGCCCCGTATCCCCGCGCGCATCGGGCCCGGAGACGCTGTAGATTTGACGTGC ATGCCGCGCAGGACGCCAAGCGGGTACGAGTACTGCCTGACAGAAGGCGAGTTTCTCCGGAGGCGCTTCATCAAG ATCCTCATCACCTACCTGGCCGTAGACGCCGTGTCCGTCTGCGTATTCAGAGACCCTTACTTCGTCGTCGGTCCG GATCGTCCCTACGAGTTGCCGCCGCATCTTCGCAACATGCCGCCTTGGCTCCTGCTTGCATACCGAGAGATGCTG GCCCTGGTCGGCATGATCAGCTCCATCACGCTTGAGTACAACATGCGCGACTTGAATTCGTACCTGGTACTCAAG CTCTTTCACCCTGCCCGCTTCGCATTGTGGCAGTACCCCTCGGCCTTTGGATCCTTCTCGCATGTCCTGGACCGC GGCCTGTCTGGATGGTGGGGAGCCTGGTGGCACCAGTCCTTTCGCCTGTCGCTTCTGGCCCCGGCCAAGTATTTC TCTCAATACCTGCCGGTCGAGAGGCGTTCTCGCGTCATCGACCTCTTTACCTTGTTCGCCTCCTTTGCCATGTCC GGCTCGCTTCACGCGGTCGGAAGCATATCAACAATGGCTGCCTCGAAGCCCTGGAAAACGCTCTTGTTCTTCCTC ATCCAGGCCGTGGGCATCGTCGTCCAGGACGCCCTGGCTATGACCATCAGGGCAGTCGTCCCGAAGCCACCCCGG GCGCTGGCGCGGGCGACCAACTTCCTCTTCACGCTGGTTTTCATGTACGCCACGGCGCATCTATTCCTCGACGAC TTGGCTTCAGCCGGGCTATGCGCGCTCGACAAAATCCCAGTTTCCCCCCTGAAGTGGCTCGGTCTTGGAACCGGT AAGGGCCATTGGTGGCGTTGGGACTACTTGGGCACTCCTGCTTGGTACTCTGGAAAACATTGGTGGGAGTCTGGG ATCTTTATATGA |
Transcript | >Hirsu2|9386 ATGGACAGCCTCTTGGAGGAGACGCGAACCAGCTTTCGAACCTCATTCCTGGACGGGCTCGCCGATGGACGAGCC AAGCCGTTCGTGATTCCGTTCAGCGCACTCGGCTCCTTCATCGTCCCCGTTGTCTGGCTCGCGATCCCGCACGCG CACCGGCCCTGGCTCTACCGGACGCGATGGATCGTCGCCGCCTTCGTCGTCGCCTTCAACCTCAACGTGCTCCGT TGGTCGTCGAGCGCGAACCCGGGCATCGCCTACGTCTTCGGCATGGCGACCGCCTGGGCCGCCGTCATGAACCTC AACCATCTCCTCTGGACGAGGCCGCAGCTCGAGGCAGCGAGAGCGCTGCGGAAAGGCCCGGAGACGGTCCGGCGC CGGGAGGCCGGCGACTCGGCCGTGTCCACCGGCTGCGCGCCGTGGCCTCCGGGCGCCTCGTCCGAGCGCAGGATC GAGGGGAAGCCGTGTGCGCGGTCCGTAGAGGAGACGGGCTCTGCCGATGAGGCGTGGGTTTGGCAGACCTTCCCG GCCGATGCTGGCTTTCTCACGCGTCTCGGCTGGGCGTTCGATCTGGCGACGAGCATTCGAGGCGGAGGCTGGAAC TGGGCCATATCGTCGATCCCCCGGCCCCGTATCCCCGCGCGCATCGGGCCCGGAGACGCTGTAGATTTGACGTGC ATGCCGCGCAGGACGCCAAGCGGGTACGAGTACTGCCTGACAGAAGGCGAGTTTCTCCGGAGGCGCTTCATCAAG ATCCTCATCACCTACCTGGCCGTAGACGCCGTGTCCGTCTGCGTATTCAGAGACCCTTACTTCGTCGTCGGTCCG GATCGTCCCTACGAGTTGCCGCCGCATCTTCGCAACATGCCGCCTTGGCTCCTGCTTGCATACCGAGAGATGCTG GCCCTGGTCGGCATGATCAGCTCCATCACGCTTGAGTACAACATGCGCGACTTGAATTCGTACCTGGTACTCAAG CTCTTTCACCCTGCCCGCTTCGCATTGTGGCAGTACCCCTCGGCCTTTGGATCCTTCTCGCATGTCCTGGACCGC GGCCTGTCTGGATGGTGGGGAGCCTGGTGGCACCAGTCCTTTCGCCTGTCGCTTCTGGCCCCGGCCAAGTATTTC TCTCAATACCTGCCGGTCGAGAGGCGTTCTCGCGTCATCGACCTCTTTACCTTGTTCGCCTCCTTTGCCATGTCC GGCTCGCTTCACGCGGTCGGAAGCATATCAACAATGGCTGCCTCGAAGCCCTGGAAAACGCTCTTGTTCTTCCTC ATCCAGGCCGTGGGCATCGTCGTCCAGGACGCCCTGGCTATGACCATCAGGGCAGTCGTCCCGAAGCCACCCCGG GCGCTGGCGCGGGCGACCAACTTCCTCTTCACGCTGGTTTTCATGTACGCCACGGCGCATCTATTCCTCGACGAC TTGGCTTCAGCCGGGCTATGCGCGCTCGACAAAATCCCAGTTTCCCCCCTGAAGTGGCTCGGTCTTGGAACCGGT AAGGGCCATTGGTGGCGTTGGGACTACTTGGGCACTCCTGCTTGGTACTCTGGAAAACATTGGTGGGAGTCTGGG ATCTTTATATGA |
Gene | >Hirsu2|9386 ATGGACAGCCTCTTGGAGGAGACGCGAACCAGCTTTCGAACCTCATTCCTGGACGGGCTCGCCGATGGACGAGCC AAGCCGTTCGTGATTCCGTTCAGCGCACTCGGCTCCTTCATCGTCCCCGTTGTCTGGCTCGCGATCCCGCACGCG CACCGGCCCTGGCTCTACCGGACGCGATGGATCGTCGCCGCCTTCGTCGTCGCCTTCAACCTCAACGTGCTCCGT TGGTCGTCGAGCGCGAACCCGGGCATCGCCTACGTCTTCGGCATGGCGACCGCCTGGGCCGCCGTCATGAACCTC AACCATCTCCTCTGGACGAGGCCGCAGCTCGAGGCAGCGAGAGCGCTGCGGAAAGGCCCGGAGACGGTCCGGCGC CGGGAGGCCGGCGACTCGGCCGTGTCCACCGGCTGCGCGCCGTGGCCTCCGGGCGCCTCGTCCGAGCGCAGGATC GAGGGGAAGCCGTGTGCGCGGTCCGTAGAGGAGACGGGCTCTGCCGATGAGGCGTGGGTTTGGCAGACCTTCCCG GCCGATGCTGGCTTTCTCACGCGTCTCGGCTGGGCGTTCGATCTGGCGACGAGCATTCGAGGCGGAGGTAAGAGC TGCGTCTGTGCCACCCCGAGAGATCCGGCTCCTTCGCCGCCCTCCGTGCGTGGGACCGGGCCGACAATTCTGACG CTCTCTCGGCAGGCTGGAACTGGGCCATATCGTCGATCCCCCGGCCCCGTATCCCCGCGCGCATCGGGCCCGGAG ACGCTGTAGATTTGACGTGCATGCCGCGCAGGACGCCAAGCGGGTACGAGTACTGCCTGACAGAAGGCGAGTTTC TCCGGAGGCGCTTCATCAAGATCCTCATCACCTACCTGGCCGTAGACGCCGTGTCCGTCTGCGTATTCAGAGACC CTTACTTCGTCGTCGGTCCGGATCGTCCCTACGAGTTGCCGCCGCATCTTCGCAACATGCCGCCTTGGCTCCTGC TTGCATACCGAGAGATGCTGGCCCTGGTCGGCATGATCAGCTCCATCACGCTTGAGTACAACATGCGCGACTTGA ATTCGTACCTGGTACTCAAGCTCTTTCACCCTGCCCGCTTCGCATTGTGGCAGTACCCCTCGGCCTTTGGATCCT TCTCGCATGTCCTGGACCGCGGCCTGTCTGGATGGTGGGGAGCCTGGTGGCACCAGTCCTTTCGCCTGTCGCTTC TGGCCCCGGCCAAGTATTTCTCTCAATACCTGCCGGTCGAGAGGCGTTCTCGCGTCATCGACCTCTTTACCTTGT TCGCCTCCTTTGCCATGTCCGGCTCGCTTCACGCGGTCGGAAGCATATCAACAATGGCTGCCTCGAAGCCCTGGA AAACGCTCTTGTTCTTCCTCATCCAGGCCGTGGGCATCGTCGTCCAGGACGCCCTGGCTATGACCATCAGGGCAG TCGTCCCGAAGCCACCCCGGGCGCTGGCGCGGGCGACCAACTTCCTCTTCACGCTGGTTTTCATGTACGCCACGG CGCATCTATTCCTCGACGACTTGGCTTCAGCCGGGCTATGCGCGCTCGACAAAATCCCAGTTTCCCCCCTGAAGT GGCTCGGTCTTGGAACCGGTAAGGGCCATTGGTGGCGTTGGGACTACTTGGGCACTCCTGCTTGGTACTCTGGAA AACATTGGTGGGAGTCTGGGATCTTTATATGA |