Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9385
Gene name
LocationContig_68:5476..6699
Strand-
Gene length (bp)1223
Transcript length (bp)1107
Coding sequence length (bp)1107
Protein length (aa) 369

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00494 SQS_PSY Squalene/phytoene synthase 2.1E-57 46 361

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=1 SV=1 20 345 2.0E-45
sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1 40 345 4.0E-44
sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1 10 345 7.0E-44
sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2 1 345 1.0E-42
sp|Q9VYS5|NDUF6_DROME NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster GN=sicily PE=2 SV=1 22 342 7.0E-32
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Swissprot ID Swissprot Description Start End E-value
sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=1 SV=1 20 345 2.0E-45
sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1 40 345 4.0E-44
sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1 10 345 7.0E-44
sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2 1 345 1.0E-42
sp|Q9VYS5|NDUF6_DROME NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster GN=sicily PE=2 SV=1 22 342 7.0E-32
sp|Q54E48|NDUF6_DICDI NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Dictyostelium discoideum GN=DDB_G0291852 PE=3 SV=1 40 281 3.0E-16
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GO

GO Term Description Terminal node
GO:0009058 biosynthetic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.1753 0.0673 0.045 0.0567 0.8956 0.0492 0.0957 0.0402 0.0925 0.0129

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4501
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5320
Ophiocordyceps australis map64 (Brazil) OphauB2|3798
Ophiocordyceps camponoti-floridani Ophcf2|01703
Ophiocordyceps camponoti-rufipedis Ophun1|6337
Ophiocordyceps kimflemingae Ophio5|4294
Ophiocordyceps subramaniannii Hirsu2|9385 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9385
MPRPSLAGSGLRASKRLFLGPAAARRGFVTDADVELARKYCLAQLHKSDYDAHLIRRFVPRPVQDAYAALRALNV
ELVRLPELVSNPTIGAMRFQFWAESIDKTFAGRPPREPICILLHRALCELEARAGSAAGQSARFWVSRLVRTRRR
HMDDRPFATLQDLEAYAENTYSTLVYACLAMMPLRSVHVDHLASHVGKACGIVAVLRGIPVLAAPARPVRTPSGA
EAPSTREPCLLLPLDVMADEGVTEEAVFRRGPDAPGLRDAVFKVATRANDHLLTARDMLRRLGQGQDAGHEFEHQ
GEADHVYDEHGDAADEIRRSFGLLLEAVPAGLFLDRLEKVNFDPFAAAGSGGWRLPWRIWQALSRSRF*
Coding >Hirsu2|9385
ATGCCTCGGCCGTCCTTGGCGGGCTCCGGCCTGCGAGCGTCCAAGAGGCTCTTCCTCGGCCCGGCAGCAGCGCGT
CGCGGCTTCGTGACGGACGCCGACGTCGAGCTGGCGAGGAAGTACTGCCTGGCGCAGCTTCACAAGAGCGACTAC
GATGCGCACCTGATCCGGCGCTTCGTCCCCCGTCCGGTCCAGGACGCCTACGCCGCGCTCCGGGCGCTCAACGTC
GAGCTGGTCCGGCTGCCGGAGCTGGTATCGAACCCGACCATCGGCGCGATGCGCTTCCAGTTCTGGGCCGAGTCC
ATCGACAAGACCTTCGCCGGCCGGCCCCCGCGCGAGCCCATCTGCATCCTCCTCCACCGCGCCCTGTGCGAGCTC
GAGGCCCGAGCCGGGTCCGCGGCCGGGCAGTCGGCCCGCTTCTGGGTCTCGCGCCTGGTGCGGACGCGCCGGCGC
CACATGGACGACCGCCCCTTCGCCACGCTGCAGGACCTCGAGGCCTACGCAGAGAACACGTACTCGACGCTCGTC
TACGCCTGCCTGGCCATGATGCCCCTGCGCTCCGTCCACGTCGACCACCTGGCCAGCCACGTCGGTAAGGCCTGC
GGCATCGTCGCCGTCCTGCGCGGCATCCCCGTCCTGGCCGCGCCCGCCCGCCCGGTCAGGACGCCGTCGGGCGCC
GAGGCCCCCAGCACCCGCGAGCCGTGCCTCCTCCTGCCGCTCGACGTCATGGCCGACGAGGGCGTCACCGAGGAG
GCCGTCTTCCGCCGCGGGCCGGACGCCCCGGGCCTCCGCGACGCCGTCTTCAAGGTCGCCACCCGGGCCAACGAC
CACCTGTTGACGGCGCGGGACATGCTGAGGCGGCTGGGCCAGGGCCAGGACGCCGGCCACGAGTTTGAGCACCAG
GGCGAGGCTGATCACGTCTACGACGAGCACGGCGACGCGGCCGACGAGATCCGTCGCAGCTTCGGCCTTCTGCTC
GAGGCCGTCCCCGCCGGCCTGTTCTTGGACCGTCTTGAAAAGGTCAACTTTGACCCGTTCGCCGCGGCAGGAAGC
GGCGGCTGGAGGCTTCCGTGGAGGATATGGCAGGCCTTGTCCAGGAGTCGGTTCTGA
Transcript >Hirsu2|9385
ATGCCTCGGCCGTCCTTGGCGGGCTCCGGCCTGCGAGCGTCCAAGAGGCTCTTCCTCGGCCCGGCAGCAGCGCGT
CGCGGCTTCGTGACGGACGCCGACGTCGAGCTGGCGAGGAAGTACTGCCTGGCGCAGCTTCACAAGAGCGACTAC
GATGCGCACCTGATCCGGCGCTTCGTCCCCCGTCCGGTCCAGGACGCCTACGCCGCGCTCCGGGCGCTCAACGTC
GAGCTGGTCCGGCTGCCGGAGCTGGTATCGAACCCGACCATCGGCGCGATGCGCTTCCAGTTCTGGGCCGAGTCC
ATCGACAAGACCTTCGCCGGCCGGCCCCCGCGCGAGCCCATCTGCATCCTCCTCCACCGCGCCCTGTGCGAGCTC
GAGGCCCGAGCCGGGTCCGCGGCCGGGCAGTCGGCCCGCTTCTGGGTCTCGCGCCTGGTGCGGACGCGCCGGCGC
CACATGGACGACCGCCCCTTCGCCACGCTGCAGGACCTCGAGGCCTACGCAGAGAACACGTACTCGACGCTCGTC
TACGCCTGCCTGGCCATGATGCCCCTGCGCTCCGTCCACGTCGACCACCTGGCCAGCCACGTCGGTAAGGCCTGC
GGCATCGTCGCCGTCCTGCGCGGCATCCCCGTCCTGGCCGCGCCCGCCCGCCCGGTCAGGACGCCGTCGGGCGCC
GAGGCCCCCAGCACCCGCGAGCCGTGCCTCCTCCTGCCGCTCGACGTCATGGCCGACGAGGGCGTCACCGAGGAG
GCCGTCTTCCGCCGCGGGCCGGACGCCCCGGGCCTCCGCGACGCCGTCTTCAAGGTCGCCACCCGGGCCAACGAC
CACCTGTTGACGGCGCGGGACATGCTGAGGCGGCTGGGCCAGGGCCAGGACGCCGGCCACGAGTTTGAGCACCAG
GGCGAGGCTGATCACGTCTACGACGAGCACGGCGACGCGGCCGACGAGATCCGTCGCAGCTTCGGCCTTCTGCTC
GAGGCCGTCCCCGCCGGCCTGTTCTTGGACCGTCTTGAAAAGGTCAACTTTGACCCGTTCGCCGCGGCAGGAAGC
GGCGGCTGGAGGCTTCCGTGGAGGATATGGCAGGCCTTGTCCAGGAGTCGGTTCTGA
Gene >Hirsu2|9385
ATGCCTCGGCCGTCCTTGGCGGGCTCCGGCCTGCGAGCGTCCAAGAGGCTCTTCCTCGGCCCGGCAGCAGCGCGT
CGCGGCTTCGTGACGGACGCCGACGTCGAGCTGGCGAGGAAGTACTGCCTGGCGCAGCTTCAGTAGGGCGCCACA
TCCAACGTCTTCGTTCCCCCTATCAAAAGCTTACTCTCGTCCCTCTCTCTCCCCCTCCCCCTTCTTCCCTTCTTC
CCTCTTCCGCTCCGATTCCCGTTCTCAGCAAGAGCGACTACGATGCGCACCTGATCCGGCGCTTCGTCCCCCGTC
CGGTCCAGGACGCCTACGCCGCGCTCCGGGCGCTCAACGTCGAGCTGGTCCGGCTGCCGGAGCTGGTATCGAACC
CGACCATCGGCGCGATGCGCTTCCAGTTCTGGGCCGAGTCCATCGACAAGACCTTCGCCGGCCGGCCCCCGCGCG
AGCCCATCTGCATCCTCCTCCACCGCGCCCTGTGCGAGCTCGAGGCCCGAGCCGGGTCCGCGGCCGGGCAGTCGG
CCCGCTTCTGGGTCTCGCGCCTGGTGCGGACGCGCCGGCGCCACATGGACGACCGCCCCTTCGCCACGCTGCAGG
ACCTCGAGGCCTACGCAGAGAACACGTACTCGACGCTCGTCTACGCCTGCCTGGCCATGATGCCCCTGCGCTCCG
TCCACGTCGACCACCTGGCCAGCCACGTCGGTAAGGCCTGCGGCATCGTCGCCGTCCTGCGCGGCATCCCCGTCC
TGGCCGCGCCCGCCCGCCCGGTCAGGACGCCGTCGGGCGCCGAGGCCCCCAGCACCCGCGAGCCGTGCCTCCTCC
TGCCGCTCGACGTCATGGCCGACGAGGGCGTCACCGAGGAGGCCGTCTTCCGCCGCGGGCCGGACGCCCCGGGCC
TCCGCGACGCCGTCTTCAAGGTCGCCACCCGGGCCAACGACCACCTGTTGACGGCGCGGGACATGCTGAGGCGGC
TGGGCCAGGGCCAGGACGCCGGCCACGAGTTTGAGCACCAGGGCGAGGCTGATCACGTCTACGACGAGCACGGCG
ACGCGGCCGACGAGATCCGTCGCAGCTTCGGCCTTCTGCTCGAGGCCGTCCCCGCCGGCCTGTTCTTGGACCGTC
TTGAAAAGGTCAACTTTGACCCGTTCGCCGCGGCAGGAAGCGGCGGCTGGAGGCTTCCGTGGAGGATATGGCAGG
CCTTGTCCAGGAGTCGGTTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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