Protein ID | Hirsu2|9368 |
Gene name | |
Location | Contig_677:30..402 |
Strand | + |
Gene length (bp) | 372 |
Transcript length (bp) | 372 |
Coding sequence length (bp) | 372 |
Protein length (aa) | 124 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03169 | OPT | OPT oligopeptide transporter protein | 4.2E-13 | 9 | 79 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 9 | 123 | 1.0E-19 |
sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 35 | 113 | 4.0E-11 |
sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 9 | 113 | 6.0E-09 |
sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 39 | 91 | 1.0E-08 |
sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 36 | 103 | 2.0E-08 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 9 | 123 | 1.0E-19 |
sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 35 | 113 | 4.0E-11 |
sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 9 | 113 | 6.0E-09 |
sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 39 | 91 | 1.0E-08 |
sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 36 | 103 | 2.0E-08 |
sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 47 | 96 | 2.0E-08 |
sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 37 | 119 | 6.0E-08 |
sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 24 | 96 | 1.0E-07 |
sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 36 | 90 | 1.0E-07 |
sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 25 | 92 | 2.0E-07 |
sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 1 | 98 | 4.0E-07 |
sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 37 | 108 | 8.0E-07 |
sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 1 | 119 | 2.0E-06 |
sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 35 | 90 | 5.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
GO:0042887 | amide transmembrane transporter activity | No |
GO:1904680 | peptide transmembrane transporter activity | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0005215 | transporter activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 23 | 45 | 22 |
2 | 58 | 80 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9368 LFPLVASLRWLSPVLVIQGLQHWAPSNLAYKTPGLLLSLVFMYWLPRRRPGWWARYNYTLSAALTAGLALSALVI FFAVGLRPRPLRWWGNTVSGAGVDGSQVGILPIPAGRGYFGPERGTFP* |
Coding | >Hirsu2|9368 CTGTTCCCGCTCGTGGCCTCGCTGCGCTGGCTCAGCCCCGTGCTGGTCATCCAGGGCCTGCAGCACTGGGCGCCC TCCAACCTGGCCTACAAGACGCCGGGCCTGCTGCTGTCGCTCGTCTTCATGTACTGGCTGCCGCGCCGCCGCCCG GGCTGGTGGGCCCGCTACAACTACACGCTGTCGGCCGCGCTGACGGCCGGCCTGGCCCTGAGCGCGCTCGTCATC TTTTTCGCCGTCGGCCTGCGCCCGCGCCCGCTGCGCTGGTGGGGGAACACGGTCAGCGGCGCCGGCGTCGACGGC TCCCAGGTCGGCATCCTGCCGATCCCGGCCGGCCGGGGCTACTTTGGGCCGGAGCGGGGGACCTTTCCGTGA |
Transcript | >Hirsu2|9368 CTGTTCCCGCTCGTGGCCTCGCTGCGCTGGCTCAGCCCCGTGCTGGTCATCCAGGGCCTGCAGCACTGGGCGCCC TCCAACCTGGCCTACAAGACGCCGGGCCTGCTGCTGTCGCTCGTCTTCATGTACTGGCTGCCGCGCCGCCGCCCG GGCTGGTGGGCCCGCTACAACTACACGCTGTCGGCCGCGCTGACGGCCGGCCTGGCCCTGAGCGCGCTCGTCATC TTTTTCGCCGTCGGCCTGCGCCCGCGCCCGCTGCGCTGGTGGGGGAACACGGTCAGCGGCGCCGGCGTCGACGGC TCCCAGGTCGGCATCCTGCCGATCCCGGCCGGCCGGGGCTACTTTGGGCCGGAGCGGGGGACCTTTCCGTGA |
Gene | >Hirsu2|9368 CTGTTCCCGCTCGTGGCCTCGCTGCGCTGGCTCAGCCCCGTGCTGGTCATCCAGGGCCTGCAGCACTGGGCGCCC TCCAACCTGGCCTACAAGACGCCGGGCCTGCTGCTGTCGCTCGTCTTCATGTACTGGCTGCCGCGCCGCCGCCCG GGCTGGTGGGCCCGCTACAACTACACGCTGTCGGCCGCGCTGACGGCCGGCCTGGCCCTGAGCGCGCTCGTCATC TTTTTCGCCGTCGGCCTGCGCCCGCGCCCGCTGCGCTGGTGGGGGAACACGGTCAGCGGCGCCGGCGTCGACGGC TCCCAGGTCGGCATCCTGCCGATCCCGGCCGGCCGGGGCTACTTTGGGCCGGAGCGGGGGACCTTTCCGTGA |