Protein ID | Hirsu2|9355 |
Gene name | |
Location | Contig_675:712..2367 |
Strand | + |
Gene length (bp) | 1655 |
Transcript length (bp) | 1596 |
Coding sequence length (bp) | 1596 |
Protein length (aa) | 532 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13813 | MBOAT_2 | Membrane bound O-acyl transferase family | 9.0E-16 | 340 | 428 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 25 | 47 | 22 |
2 | 60 | 79 | 19 |
3 | 83 | 105 | 22 |
4 | 389 | 411 | 22 |
5 | 426 | 448 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9355 MDRAWDSARAARRADFAQAVADGRLTPFLVLHSLLVSMIVPTLWLSIPHVRRPRLYQTRWLVVAFVAACNLHLIW TSSSANVFSAYFMGVFISSGILVTMNLLVWRRPQFDAARAVRALAPLKRPPPDQMAGSTPYDPRPSPNRDGTPGH EDRDAASFRSWRTEAALDDGLFVWQPFPADAPFSDRFGWALDLVLSNRGSGWNSSISSIPHPPVDLPVGPGQPVR LRSMPRVTRSGYERCFTEGEFVRKRLLEVLAKYLVLDCCHVAMTKDPYFVLGADHAHRHPSHLLALPAWQLHLYR QLIFLLFITSLLRIVSAINDLVQYWVFKIYFSSRAALWLYPSYFGSFSRVLDAGLAGWWGGWWHQTLRQPFSAPA TYLRTHGYIKAGSSLAAAVTIFVSFLQSGLVHAAASMTATPATTVWRPIAFFLLQPVGILVQKTLVWLVQYLVPR PPRVVARTANLLFALAWLHLTADFFVDDFACGGVTLLELIPFSPLRWLAYGHATGHWWRWNRQMLPSWHSGKYWW MSGIAI* |
Coding | >Hirsu2|9355 ATGGACAGAGCGTGGGACAGCGCGCGCGCCGCTCGCCGCGCCGACTTCGCCCAGGCCGTGGCCGACGGCCGACTC ACGCCCTTTCTCGTCCTCCACAGCCTCCTCGTCTCCATGATCGTGCCCACCCTGTGGCTCAGCATCCCCCACGTG CGCCGCCCGCGCCTCTACCAGACGCGCTGGCTCGTCGTCGCCTTCGTCGCCGCCTGCAACCTCCACCTCATCTGG ACGTCGTCCAGCGCCAACGTATTCTCCGCTTACTTCATGGGCGTGTTTATCTCCTCCGGCATTCTTGTAACCATG AACCTGCTTGTTTGGAGGCGGCCCCAGTTCGACGCGGCAAGGGCCGTCCGGGCTCTGGCTCCTTTGAAACGACCG CCCCCGGACCAGATGGCCGGCAGCACCCCATACGACCCTCGCCCTTCTCCAAACAGGGACGGGACGCCGGGGCAC GAGGACCGCGACGCCGCCTCCTTCCGGTCGTGGCGGACAGAGGCCGCCCTGGATGATGGCCTGTTCGTCTGGCAA CCTTTTCCCGCTGACGCGCCCTTCTCAGACCGCTTCGGATGGGCTTTGGATCTGGTGCTGAGCAATCGAGGCTCA GGTTGGAACTCGTCCATATCGTCTATCCCGCACCCTCCAGTGGATCTTCCTGTCGGCCCGGGTCAGCCCGTGCGC CTCCGATCCATGCCCCGTGTGACAAGAAGCGGATACGAACGGTGCTTCACTGAGGGCGAATTCGTGCGGAAGCGG CTCCTTGAGGTGCTGGCCAAGTATCTGGTCCTTGATTGCTGCCACGTCGCCATGACCAAGGATCCCTACTTCGTC CTTGGGGCCGACCATGCCCATCGACACCCATCCCATTTACTTGCCTTGCCGGCCTGGCAGCTGCATCTTTACAGG CAGCTCATATTCCTCCTTTTCATCACGTCACTTCTTCGAATTGTCAGCGCCATCAACGACCTTGTCCAATACTGG GTCTTCAAGATCTACTTTTCCAGCCGGGCCGCACTCTGGTTATACCCCTCATATTTTGGCTCCTTTTCCCGCGTC CTCGATGCCGGTCTCGCCGGCTGGTGGGGGGGGTGGTGGCACCAAACCCTCCGACAGCCCTTCTCCGCCCCAGCG ACGTATCTCCGCACACACGGTTACATCAAGGCCGGCAGCTCCCTGGCGGCCGCCGTCACCATCTTCGTGTCCTTC CTTCAGTCCGGGCTGGTGCATGCCGCCGCGAGCATGACCGCCACCCCTGCCACGACTGTTTGGAGACCTATAGCT TTCTTCCTCCTCCAGCCCGTCGGGATCCTCGTCCAAAAAACCCTCGTCTGGCTAGTCCAGTACTTGGTCCCCAGG CCGCCGAGGGTTGTAGCCAGGACCGCGAATCTGCTCTTCGCCTTGGCCTGGTTACACCTGACGGCCGACTTTTTC GTCGATGATTTTGCTTGCGGAGGGGTGACGCTGCTAGAACTAATTCCCTTTTCCCCCCTGCGCTGGCTGGCTTAC GGACATGCAACTGGCCACTGGTGGCGCTGGAACCGCCAAATGCTCCCCAGCTGGCACTCTGGGAAGTATTGGTGG ATGTCTGGTATCGCCATATAG |
Transcript | >Hirsu2|9355 ATGGACAGAGCGTGGGACAGCGCGCGCGCCGCTCGCCGCGCCGACTTCGCCCAGGCCGTGGCCGACGGCCGACTC ACGCCCTTTCTCGTCCTCCACAGCCTCCTCGTCTCCATGATCGTGCCCACCCTGTGGCTCAGCATCCCCCACGTG CGCCGCCCGCGCCTCTACCAGACGCGCTGGCTCGTCGTCGCCTTCGTCGCCGCCTGCAACCTCCACCTCATCTGG ACGTCGTCCAGCGCCAACGTATTCTCCGCTTACTTCATGGGCGTGTTTATCTCCTCCGGCATTCTTGTAACCATG AACCTGCTTGTTTGGAGGCGGCCCCAGTTCGACGCGGCAAGGGCCGTCCGGGCTCTGGCTCCTTTGAAACGACCG CCCCCGGACCAGATGGCCGGCAGCACCCCATACGACCCTCGCCCTTCTCCAAACAGGGACGGGACGCCGGGGCAC GAGGACCGCGACGCCGCCTCCTTCCGGTCGTGGCGGACAGAGGCCGCCCTGGATGATGGCCTGTTCGTCTGGCAA CCTTTTCCCGCTGACGCGCCCTTCTCAGACCGCTTCGGATGGGCTTTGGATCTGGTGCTGAGCAATCGAGGCTCA GGTTGGAACTCGTCCATATCGTCTATCCCGCACCCTCCAGTGGATCTTCCTGTCGGCCCGGGTCAGCCCGTGCGC CTCCGATCCATGCCCCGTGTGACAAGAAGCGGATACGAACGGTGCTTCACTGAGGGCGAATTCGTGCGGAAGCGG CTCCTTGAGGTGCTGGCCAAGTATCTGGTCCTTGATTGCTGCCACGTCGCCATGACCAAGGATCCCTACTTCGTC CTTGGGGCCGACCATGCCCATCGACACCCATCCCATTTACTTGCCTTGCCGGCCTGGCAGCTGCATCTTTACAGG CAGCTCATATTCCTCCTTTTCATCACGTCACTTCTTCGAATTGTCAGCGCCATCAACGACCTTGTCCAATACTGG GTCTTCAAGATCTACTTTTCCAGCCGGGCCGCACTCTGGTTATACCCCTCATATTTTGGCTCCTTTTCCCGCGTC CTCGATGCCGGTCTCGCCGGCTGGTGGGGGGGGTGGTGGCACCAAACCCTCCGACAGCCCTTCTCCGCCCCAGCG ACGTATCTCCGCACACACGGTTACATCAAGGCCGGCAGCTCCCTGGCGGCCGCCGTCACCATCTTCGTGTCCTTC CTTCAGTCCGGGCTGGTGCATGCCGCCGCGAGCATGACCGCCACCCCTGCCACGACTGTTTGGAGACCTATAGCT TTCTTCCTCCTCCAGCCCGTCGGGATCCTCGTCCAAAAAACCCTCGTCTGGCTAGTCCAGTACTTGGTCCCCAGG CCGCCGAGGGTTGTAGCCAGGACCGCGAATCTGCTCTTCGCCTTGGCCTGGTTACACCTGACGGCCGACTTTTTC GTCGATGATTTTGCTTGCGGAGGGGTGACGCTGCTAGAACTAATTCCCTTTTCCCCCCTGCGCTGGCTGGCTTAC GGACATGCAACTGGCCACTGGTGGCGCTGGAACCGCCAAATGCTCCCCAGCTGGCACTCTGGGAAGTATTGGTGG ATGTCTGGTATCGCCATATAG |
Gene | >Hirsu2|9355 ATGGACAGAGCGTGGGACAGCGCGCGCGCCGCTCGCCGCGCCGACTTCGCCCAGGCCGTGGCCGACGGCCGACTC ACGCCCTTTCTCGTCCTCCACAGCCTCCTCGTCTCCATGATCGTGCCCACCCTGTGGCTCAGCATCCCCCACGTG CGCCGCCCGCGCCTCTACCAGACGCGCTGGCTCGTCGTCGCCTTCGTCGCCGCCTGCAACCTCCACCTCATCTGG ACGTCGTCCAGCGCCAACGTATTCTCCGCTTACTTCATGGGCGTGTTTATCTCCTCCGGCATTCTTGTAACCATG AACCTGCTTGTTTGGAGGCGGCCCCAGTTCGACGCGGCAAGGGCCGTCCGGGCTCTGGCTCCTTTGAAACGACCG CCCCCGGACCAGATGGCCGGCAGCACCCCATACGACCCTCGCCCTTCTCCAAACAGGGACGGGACGCCGGGGCAC GAGGACCGCGACGCCGCCTCCTTCCGGTCGTGGCGGACAGAGGCCGCCCTGGATGATGGCCTGTTCGTCTGGCAA CCTTTTCCCGCTGACGCGCCCTTCTCAGACCGCTTCGGATGGGCTTTGGATCTGGTGCTGAGCAATCGAGGCTCA GGTACGCCCCCTCCCGCTACCGATGCAGTTGTCCACTCCGCCTCCTAACCGCAGCGACAGGTTGGAACTCGTCCA TATCGTCTATCCCGCACCCTCCAGTGGATCTTCCTGTCGGCCCGGGTCAGCCCGTGCGCCTCCGATCCATGCCCC GTGTGACAAGAAGCGGATACGAACGGTGCTTCACTGAGGGCGAATTCGTGCGGAAGCGGCTCCTTGAGGTGCTGG CCAAGTATCTGGTCCTTGATTGCTGCCACGTCGCCATGACCAAGGATCCCTACTTCGTCCTTGGGGCCGACCATG CCCATCGACACCCATCCCATTTACTTGCCTTGCCGGCCTGGCAGCTGCATCTTTACAGGCAGCTCATATTCCTCC TTTTCATCACGTCACTTCTTCGAATTGTCAGCGCCATCAACGACCTTGTCCAATACTGGGTCTTCAAGATCTACT TTTCCAGCCGGGCCGCACTCTGGTTATACCCCTCATATTTTGGCTCCTTTTCCCGCGTCCTCGATGCCGGTCTCG CCGGCTGGTGGGGGGGGTGGTGGCACCAAACCCTCCGACAGCCCTTCTCCGCCCCAGCGACGTATCTCCGCACAC ACGGTTACATCAAGGCCGGCAGCTCCCTGGCGGCCGCCGTCACCATCTTCGTGTCCTTCCTTCAGTCCGGGCTGG TGCATGCCGCCGCGAGCATGACCGCCACCCCTGCCACGACTGTTTGGAGACCTATAGCTTTCTTCCTCCTCCAGC CCGTCGGGATCCTCGTCCAAAAAACCCTCGTCTGGCTAGTCCAGTACTTGGTCCCCAGGCCGCCGAGGGTTGTAG CCAGGACCGCGAATCTGCTCTTCGCCTTGGCCTGGTTACACCTGACGGCCGACTTTTTCGTCGATGATTTTGCTT GCGGAGGGGTGACGCTGCTAGAACTAATTCCCTTTTCCCCCCTGCGCTGGCTGGCTTACGGACATGCAACTGGCC ACTGGTGGCGCTGGAACCGCCAAATGCTCCCCAGCTGGCACTCTGGGAAGTATTGGTGGATGTCTGGTATCGCCA TATAG |