Protein ID | Hirsu2|9351 |
Gene name | |
Location | Contig_674:2950..4000 |
Strand | - |
Gene length (bp) | 1050 |
Transcript length (bp) | 1050 |
Coding sequence length (bp) | 1050 |
Protein length (aa) | 350 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 2.2E-10 | 255 | 335 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8W4D8|DDL_ARATH | FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1 | 188 | 344 | 9.0E-34 |
sp|Q5M9G6|SNIP1_RAT | Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1 | 73 | 344 | 1.0E-31 |
sp|Q8BIZ6|SNIP1_MOUSE | Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1 | 172 | 344 | 2.0E-31 |
sp|Q8TAD8|SNIP1_HUMAN | Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 | 188 | 344 | 3.0E-31 |
sp|Q54VU4|Y8013_DICDI | Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1 | 216 | 344 | 6.0E-28 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8W4D8|DDL_ARATH | FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1 | 188 | 344 | 9.0E-34 |
sp|Q5M9G6|SNIP1_RAT | Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1 | 73 | 344 | 1.0E-31 |
sp|Q8BIZ6|SNIP1_MOUSE | Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1 | 172 | 344 | 2.0E-31 |
sp|Q8TAD8|SNIP1_HUMAN | Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 | 188 | 344 | 3.0E-31 |
sp|Q54VU4|Y8013_DICDI | Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1 | 216 | 344 | 6.0E-28 |
sp|Q07930|PML1_YEAST | Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PML1 PE=1 SV=1 | 193 | 332 | 1.0E-11 |
sp|P34648|YOT2_CAEEL | Uncharacterized protein ZK632.2 OS=Caenorhabditis elegans GN=ZK632.2 PE=3 SV=1 | 187 | 339 | 8.0E-10 |
sp|Q9BWU0|NADAP_HUMAN | Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1 | 233 | 343 | 1.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.1927 | 0.8959 | 0.066 | 0.0404 | 0.0364 | 0.0195 | 0.0185 | 0.0118 | 0.0066 | 0.0013 |
Orthofinder run ID | 4 |
Orthogroup | 4487 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9351 MAPAEAYRARPSGRRDDDDSADDGATRRGEDDRRHGRRSSRERYGSRARRRSLTPDSSPRRRHHRQRDYDGDRGR DRGRDRSSGRDRGRDRSTGRDRGRDRSTGRDRGRDRSTGRDRDREGSASRDRTRRSSRERKRAGRRQESHPATAD RDDPKGPRKDLVKHRGPLPSQQESFSHDHGDGSLDQPKEKVNWANTGALAAASNSVVQADGSSTTLKYHEPSEAR KPSPRDQWKLFVFKGGDIVDTIDLNLKSCWLVGRDSGVVDVLAEHPSISKQHAVIQFRYTEKRNEFGDKIGKVKP YLLDLESANGSVLNDDAVPQSRFLELRPKDMILFGHSTREYVVMLAPRD* |
Coding | >Hirsu2|9351 ATGGCGCCCGCCGAAGCCTACCGAGCGAGGCCCAGCGGCCGGCGCGACGACGACGACAGCGCAGATGACGGCGCC ACACGTCGAGGCGAAGACGACCGGAGACACGGACGCCGAAGCAGTCGCGAACGATACGGCTCACGTGCGAGGCGG CGCTCGCTCACGCCCGACTCTTCGCCCCGGCGGCGTCATCACCGCCAGCGAGACTACGACGGTGACCGCGGCCGT GACCGAGGCAGAGATAGGAGCTCCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGTGATCGAGGCAGGGAC AGGAGCACCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGCGATCGAGACAGAGAGGGGAGCGCCAGCCGA GATCGGACGCGCCGGAGCTCACGAGAGCGGAAACGCGCCGGCCGCCGCCAAGAAAGCCACCCGGCGACGGCTGAC CGTGACGACCCCAAGGGACCGCGGAAGGATTTGGTCAAGCATCGAGGGCCACTCCCCTCTCAACAGGAATCGTTT TCCCACGACCACGGAGATGGGTCTCTCGACCAGCCAAAGGAGAAGGTGAACTGGGCCAACACGGGAGCCTTGGCT GCGGCGTCAAACTCAGTCGTCCAGGCCGACGGCTCGTCCACCACACTCAAGTATCACGAGCCGTCCGAGGCGCGC AAGCCGTCGCCACGCGATCAGTGGAAGCTTTTCGTCTTCAAAGGCGGCGACATTGTCGACACCATCGACCTCAAC CTCAAGTCCTGCTGGCTGGTCGGCAGGGACTCGGGCGTCGTCGACGTCTTGGCCGAGCACCCCAGCATCAGCAAG CAGCACGCCGTCATCCAGTTCCGCTACACGGAGAAGAGGAACGAGTTTGGCGACAAGATCGGCAAGGTGAAGCCG TACCTCCTCGACCTCGAAAGCGCCAACGGCAGCGTTCTCAACGACGACGCCGTCCCCCAGAGTCGCTTCCTCGAG CTCCGACCAAAGGACATGATACTCTTTGGGCACAGCACGAGGGAGTATGTCGTCATGCTGGCTCCTCGAGACTGA |
Transcript | >Hirsu2|9351 ATGGCGCCCGCCGAAGCCTACCGAGCGAGGCCCAGCGGCCGGCGCGACGACGACGACAGCGCAGATGACGGCGCC ACACGTCGAGGCGAAGACGACCGGAGACACGGACGCCGAAGCAGTCGCGAACGATACGGCTCACGTGCGAGGCGG CGCTCGCTCACGCCCGACTCTTCGCCCCGGCGGCGTCATCACCGCCAGCGAGACTACGACGGTGACCGCGGCCGT GACCGAGGCAGAGATAGGAGCTCCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGTGATCGAGGCAGGGAC AGGAGCACCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGCGATCGAGACAGAGAGGGGAGCGCCAGCCGA GATCGGACGCGCCGGAGCTCACGAGAGCGGAAACGCGCCGGCCGCCGCCAAGAAAGCCACCCGGCGACGGCTGAC CGTGACGACCCCAAGGGACCGCGGAAGGATTTGGTCAAGCATCGAGGGCCACTCCCCTCTCAACAGGAATCGTTT TCCCACGACCACGGAGATGGGTCTCTCGACCAGCCAAAGGAGAAGGTGAACTGGGCCAACACGGGAGCCTTGGCT GCGGCGTCAAACTCAGTCGTCCAGGCCGACGGCTCGTCCACCACACTCAAGTATCACGAGCCGTCCGAGGCGCGC AAGCCGTCGCCACGCGATCAGTGGAAGCTTTTCGTCTTCAAAGGCGGCGACATTGTCGACACCATCGACCTCAAC CTCAAGTCCTGCTGGCTGGTCGGCAGGGACTCGGGCGTCGTCGACGTCTTGGCCGAGCACCCCAGCATCAGCAAG CAGCACGCCGTCATCCAGTTCCGCTACACGGAGAAGAGGAACGAGTTTGGCGACAAGATCGGCAAGGTGAAGCCG TACCTCCTCGACCTCGAAAGCGCCAACGGCAGCGTTCTCAACGACGACGCCGTCCCCCAGAGTCGCTTCCTCGAG CTCCGACCAAAGGACATGATACTCTTTGGGCACAGCACGAGGGAGTATGTCGTCATGCTGGCTCCTCGAGACTGA |
Gene | >Hirsu2|9351 ATGGCGCCCGCCGAAGCCTACCGAGCGAGGCCCAGCGGCCGGCGCGACGACGACGACAGCGCAGATGACGGCGCC ACACGTCGAGGCGAAGACGACCGGAGACACGGACGCCGAAGCAGTCGCGAACGATACGGCTCACGTGCGAGGCGG CGCTCGCTCACGCCCGACTCTTCGCCCCGGCGGCGTCATCACCGCCAGCGAGACTACGACGGTGACCGCGGCCGT GACCGAGGCAGAGATAGGAGCTCCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGTGATCGAGGCAGGGAC AGGAGCACCGGCCGTGATCGAGGCAGGGACAGGAGCACCGGCCGCGATCGAGACAGAGAGGGGAGCGCCAGCCGA GATCGGACGCGCCGGAGCTCACGAGAGCGGAAACGCGCCGGCCGCCGCCAAGAAAGCCACCCGGCGACGGCTGAC CGTGACGACCCCAAGGGACCGCGGAAGGATTTGGTCAAGCATCGAGGGCCACTCCCCTCTCAACAGGAATCGTTT TCCCACGACCACGGAGATGGGTCTCTCGACCAGCCAAAGGAGAAGGTGAACTGGGCCAACACGGGAGCCTTGGCT GCGGCGTCAAACTCAGTCGTCCAGGCCGACGGCTCGTCCACCACACTCAAGTATCACGAGCCGTCCGAGGCGCGC AAGCCGTCGCCACGCGATCAGTGGAAGCTTTTCGTCTTCAAAGGCGGCGACATTGTCGACACCATCGACCTCAAC CTCAAGTCCTGCTGGCTGGTCGGCAGGGACTCGGGCGTCGTCGACGTCTTGGCCGAGCACCCCAGCATCAGCAAG CAGCACGCCGTCATCCAGTTCCGCTACACGGAGAAGAGGAACGAGTTTGGCGACAAGATCGGCAAGGTGAAGCCG TACCTCCTCGACCTCGAAAGCGCCAACGGCAGCGTTCTCAACGACGACGCCGTCCCCCAGAGTCGCTTCCTCGAG CTCCGACCAAAGGACATGATACTCTTTGGGCACAGCACGAGGGAGTATGTCGTCATGCTGGCTCCTCGAGACTGA |