Protein ID | Hirsu2|9343 |
Gene name | |
Location | Contig_672:1806..4030 |
Strand | + |
Gene length (bp) | 2224 |
Transcript length (bp) | 1974 |
Coding sequence length (bp) | 1974 |
Protein length (aa) | 658 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 53 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 25 | 47 | 22 |
2 | 62 | 84 | 22 |
3 | 130 | 152 | 22 |
4 | 547 | 569 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9343 MSGDRMAGVDHLLGENKIGVKTPSLMIVSYLLAITLAVVHYCFFLAISGSAAEGPGPHLPQTYSTTISILLANGF GLALRFSLSIAFTQYLWKLVRVTPMRLSTIDNLFSLRATPTNLLDFTIVSQASPLAFMAIIIWTMPIFTGFPAGA MTVSPTQKHQVMSNVSVPTFNASYATNWTWPEPADSMLVPIKHDVSVFGAGSKIWPLWDQMFEQAKNFPLRQVVE ATIVSGNAGITLSPEASNISYTTTFYGPYLNCTSSDGGNFTIKDLPALDNKVVAMNATLKFNPTHDWDYDGSSAE ALDPCPVELTLVHNDFKELSRFVPPVQHGYFVTLTATATRRILRCKPVKALYRAYHQYENSVGRVQVSIVEHSIA PLTKAFERINLTSELPSDISTLPGMVDMAIDANLMALIVYMAQGLSGSLEARLAVDFTGPEVYTHNGRYQKYAFG LHLITLDGNPASRNNSLVRFTEICKYFRESPDFIRDPAAGRLAENLRIDLNADILNAVLVNITLSTISHFKRWQS PVDINKTTWVTSYSFSRPENLILPYTIAILCSLPLIALGLLALYSNGVPAIDGGVFQLLMTTRGSRMIDELAARG SLGGEENIPPELKKLEVQYGRLPASRVGCRTTEGHIGPIAGFGATIEVVPLRKAPRK* |
Coding | >Hirsu2|9343 ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT ATGATTGTCTCATATCTACTAGCAATCACCCTCGCCGTGGTTCACTACTGCTTCTTTCTTGCGATATCCGGATCC GCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATATCGATCCTATTAGCAAACGGTTTT GGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGGAAACTTGTTCGCGTCACTCCGATG CGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAATCTGCTTGATTTCACTATCGTATCT CAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATTTTTACTGGGTTCCCCGCCGGCGCA ATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTTCCCACATTCAACGCTTCTTACGCT ACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTGTTTTTGGCGCT GGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTCAAGTTGTGGAG GCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACACGACCACCTTT TATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCGCACTCGACAAT AAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCAGTTCAGCTGAG GCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGATTCGTTCCTCCC GTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAACCCGTCAAGGCC TTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGCACTCGATAGCT CCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACACTGCCTGGGATG GTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGGGGAGCCTAGAG GCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAATATGCATTCGGA CTTCATCTGATCACTCTAGACGGCAACCCCGCGTCCAGAAACAATTCACTCGTGCGGTTCACGGAGATATGCAAA TACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCTTGCTGAGAACCTCAGGATCGACCTG AATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGATTTCGCATTTCAAACGCTGGCAATCT CCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCGACCTGAGAACCTTATTCTTCCATAC ACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGCGCTCTACTCGAATGGCGTGCCAGCG ATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCATGATCGACGAGCTGGCCGCCCGGGGA AGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGTTCAGTACGGCCGGCTGCCGGCTTCT CGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTTTGGGGCCACGATCGAAGTTGTGCCT CTTCGCAAGGCGCCGCGGAAATAG |
Transcript | >Hirsu2|9343 ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT ATGATTGTCTCATATCTACTAGCAATCACCCTCGCCGTGGTTCACTACTGCTTCTTTCTTGCGATATCCGGATCC GCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATATCGATCCTATTAGCAAACGGTTTT GGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGGAAACTTGTTCGCGTCACTCCGATG CGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAATCTGCTTGATTTCACTATCGTATCT CAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATTTTTACTGGGTTCCCCGCCGGCGCA ATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTTCCCACATTCAACGCTTCTTACGCT ACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTGTTTTTGGCGCT GGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTCAAGTTGTGGAG GCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACACGACCACCTTT TATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCGCACTCGACAAT AAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCAGTTCAGCTGAG GCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGATTCGTTCCTCCC GTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAACCCGTCAAGGCC TTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGCACTCGATAGCT CCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACACTGCCTGGGATG GTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGGGGAGCCTAGAG GCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAATATGCATTCGGA CTTCATCTGATCACTCTAGACGGCAACCCCGCGTCCAGAAACAATTCACTCGTGCGGTTCACGGAGATATGCAAA TACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCTTGCTGAGAACCTCAGGATCGACCTG AATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGATTTCGCATTTCAAACGCTGGCAATCT CCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCGACCTGAGAACCTTATTCTTCCATAC ACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGCGCTCTACTCGAATGGCGTGCCAGCG ATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCATGATCGACGAGCTGGCCGCCCGGGGA AGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGTTCAGTACGGCCGGCTGCCGGCTTCT CGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTTTGGGGCCACGATCGAAGTTGTGCCT CTTCGCAAGGCGCCGCGGAAATAG |
Gene | >Hirsu2|9343 ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT ATGATTGTCTCATATCTACTAGGTAAGCTCATAGCCTCCCCTTCAATCAATGCTGCTCTATTCCCGATATCTCAC CATAGGAAGATGCTCAGTGCTTACATATAGTCGGGTCTGGGAATAGCAATCACCCTCGCCGTGGTTCACTACTGC TTCTTTCTTGCGATATCCGGATCCGCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATA TCGATCCTATTAGCAAACGGTTTTGGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGG AAACTTGTTCGCGTCACTCCGATGCGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAAT CTGCTTGATTTCACTATCGTATCTCAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATT TTTACTGGGTTCCCCGCCGGCGCAATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTT CCCACATTCAACGCTTCTTACGTGGGTCATCTCGAGTTTGTGGTTTGTCATGCCTCACGTTTAGTACTAACGTGC TCATGTAGGCTACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTG TTTTTGGCGCTGGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTC AAGTTGTGGAGGCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACA CGACCACCTTTTATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCG CACTCGACAATAAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCA GTTCAGCTGAGGCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGAT TCGTTCCTCCCGTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAAC CCGTCAAGGCCTTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGC ACTCGATAGCTCCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACAC TGCCTGGGATGGTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGG GGAGCCTAGAGGCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAAT ATGCATTCGGACTTCATCTGATCACTCTAGACGGTACAATCTTACTCCAAGTTCCGGTGCCATCCCATCTTGTTT TAGGCGTTTATGTACGAGGAGGGATACTGACAAGGGGTGTGAAAAAGGCAACCCCGCGTCCAGAAACAATTCACT CGTGCGGTTCACGGAGATATGCAAATACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCT TGCTGAGAACCTCAGGATCGACCTGAATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGAT TTCGCATTTCAAACGCTGGCAATCTCCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCG ACCTGAGAACCTTATTCTTCCATACACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGC GCTCTACTCGAATGGCGTGCCAGCGATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCAT GATCGACGAGCTGGCCGCCCGGGGAAGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGT TCAGTACGGCCGGCTGCCGGCTTCTCGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTT TGGGGCCACGATCGAAGTTGTGCCTCTTCGCAAGGCGCCGCGGAAATAG |