Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9343
Gene name
LocationContig_672:1806..4030
Strand+
Gene length (bp)2224
Transcript length (bp)1974
Coding sequence length (bp)1974
Protein length (aa) 658

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 62 84 22
3 130 152 22
4 547 569 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9343
MSGDRMAGVDHLLGENKIGVKTPSLMIVSYLLAITLAVVHYCFFLAISGSAAEGPGPHLPQTYSTTISILLANGF
GLALRFSLSIAFTQYLWKLVRVTPMRLSTIDNLFSLRATPTNLLDFTIVSQASPLAFMAIIIWTMPIFTGFPAGA
MTVSPTQKHQVMSNVSVPTFNASYATNWTWPEPADSMLVPIKHDVSVFGAGSKIWPLWDQMFEQAKNFPLRQVVE
ATIVSGNAGITLSPEASNISYTTTFYGPYLNCTSSDGGNFTIKDLPALDNKVVAMNATLKFNPTHDWDYDGSSAE
ALDPCPVELTLVHNDFKELSRFVPPVQHGYFVTLTATATRRILRCKPVKALYRAYHQYENSVGRVQVSIVEHSIA
PLTKAFERINLTSELPSDISTLPGMVDMAIDANLMALIVYMAQGLSGSLEARLAVDFTGPEVYTHNGRYQKYAFG
LHLITLDGNPASRNNSLVRFTEICKYFRESPDFIRDPAAGRLAENLRIDLNADILNAVLVNITLSTISHFKRWQS
PVDINKTTWVTSYSFSRPENLILPYTIAILCSLPLIALGLLALYSNGVPAIDGGVFQLLMTTRGSRMIDELAARG
SLGGEENIPPELKKLEVQYGRLPASRVGCRTTEGHIGPIAGFGATIEVVPLRKAPRK*
Coding >Hirsu2|9343
ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT
ATGATTGTCTCATATCTACTAGCAATCACCCTCGCCGTGGTTCACTACTGCTTCTTTCTTGCGATATCCGGATCC
GCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATATCGATCCTATTAGCAAACGGTTTT
GGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGGAAACTTGTTCGCGTCACTCCGATG
CGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAATCTGCTTGATTTCACTATCGTATCT
CAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATTTTTACTGGGTTCCCCGCCGGCGCA
ATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTTCCCACATTCAACGCTTCTTACGCT
ACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTGTTTTTGGCGCT
GGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTCAAGTTGTGGAG
GCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACACGACCACCTTT
TATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCGCACTCGACAAT
AAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCAGTTCAGCTGAG
GCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGATTCGTTCCTCCC
GTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAACCCGTCAAGGCC
TTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGCACTCGATAGCT
CCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACACTGCCTGGGATG
GTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGGGGAGCCTAGAG
GCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAATATGCATTCGGA
CTTCATCTGATCACTCTAGACGGCAACCCCGCGTCCAGAAACAATTCACTCGTGCGGTTCACGGAGATATGCAAA
TACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCTTGCTGAGAACCTCAGGATCGACCTG
AATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGATTTCGCATTTCAAACGCTGGCAATCT
CCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCGACCTGAGAACCTTATTCTTCCATAC
ACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGCGCTCTACTCGAATGGCGTGCCAGCG
ATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCATGATCGACGAGCTGGCCGCCCGGGGA
AGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGTTCAGTACGGCCGGCTGCCGGCTTCT
CGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTTTGGGGCCACGATCGAAGTTGTGCCT
CTTCGCAAGGCGCCGCGGAAATAG
Transcript >Hirsu2|9343
ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT
ATGATTGTCTCATATCTACTAGCAATCACCCTCGCCGTGGTTCACTACTGCTTCTTTCTTGCGATATCCGGATCC
GCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATATCGATCCTATTAGCAAACGGTTTT
GGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGGAAACTTGTTCGCGTCACTCCGATG
CGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAATCTGCTTGATTTCACTATCGTATCT
CAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATTTTTACTGGGTTCCCCGCCGGCGCA
ATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTTCCCACATTCAACGCTTCTTACGCT
ACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTGTTTTTGGCGCT
GGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTCAAGTTGTGGAG
GCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACACGACCACCTTT
TATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCGCACTCGACAAT
AAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCAGTTCAGCTGAG
GCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGATTCGTTCCTCCC
GTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAACCCGTCAAGGCC
TTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGCACTCGATAGCT
CCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACACTGCCTGGGATG
GTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGGGGAGCCTAGAG
GCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAATATGCATTCGGA
CTTCATCTGATCACTCTAGACGGCAACCCCGCGTCCAGAAACAATTCACTCGTGCGGTTCACGGAGATATGCAAA
TACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCTTGCTGAGAACCTCAGGATCGACCTG
AATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGATTTCGCATTTCAAACGCTGGCAATCT
CCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCGACCTGAGAACCTTATTCTTCCATAC
ACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGCGCTCTACTCGAATGGCGTGCCAGCG
ATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCATGATCGACGAGCTGGCCGCCCGGGGA
AGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGTTCAGTACGGCCGGCTGCCGGCTTCT
CGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTTTGGGGCCACGATCGAAGTTGTGCCT
CTTCGCAAGGCGCCGCGGAAATAG
Gene >Hirsu2|9343
ATGTCTGGTGACAGAATGGCCGGCGTCGATCATCTCCTGGGGGAGAACAAGATTGGCGTCAAGACACCGAGCCTT
ATGATTGTCTCATATCTACTAGGTAAGCTCATAGCCTCCCCTTCAATCAATGCTGCTCTATTCCCGATATCTCAC
CATAGGAAGATGCTCAGTGCTTACATATAGTCGGGTCTGGGAATAGCAATCACCCTCGCCGTGGTTCACTACTGC
TTCTTTCTTGCGATATCCGGATCCGCGGCCGAGGGACCCGGGCCCCACCTTCCTCAAACGTATTCAACAACAATA
TCGATCCTATTAGCAAACGGTTTTGGTCTTGCGTTGCGGTTCAGTCTATCTATAGCCTTCACCCAATATCTCTGG
AAACTTGTTCGCGTCACTCCGATGCGGCTTTCCACCATCGACAACTTGTTCTCCCTCAGAGCTACCCCGACCAAT
CTGCTTGATTTCACTATCGTATCTCAGGCCTCGCCGCTTGCATTCATGGCTATAATCATATGGACAATGCCAATT
TTTACTGGGTTCCCCGCCGGCGCAATGACCGTCTCACCAACTCAGAAGCACCAAGTCATGAGCAACGTTTCCGTT
CCCACATTCAACGCTTCTTACGTGGGTCATCTCGAGTTTGTGGTTTGTCATGCCTCACGTTTAGTACTAACGTGC
TCATGTAGGCTACAAACTGGACATGGCCAGAACCCGCGGACTCCATGCTGGTGCCGATAAAACATGACGTTTCTG
TTTTTGGCGCTGGCAGTAAGATCTGGCCTTTGTGGGACCAGATGTTTGAGCAAGCGAAAAACTTTCCACTGCGTC
AAGTTGTGGAGGCGACGATAGTGTCTGGTAACGCCGGGATAACCCTATCGCCAGAGGCGTCAAACATCTCCTACA
CGACCACCTTTTATGGGCCCTACTTGAATTGCACCTCTTCAGACGGTGGAAACTTCACTATCAAAGATTTACCCG
CACTCGACAATAAAGTAGTCGCAATGAACGCAACGCTCAAGTTCAATCCGACTCATGACTGGGACTACGATGGCA
GTTCAGCTGAGGCTCTGGATCCATGTCCGGTGGAGCTTACCTTGGTGCATAACGACTTTAAGGAACTCAGTCGAT
TCGTTCCTCCCGTGCAGCATGGGTACTTCGTAACGCTTACGGCCACGGCCACGAGACGGATTCTGCGATGCAAAC
CCGTCAAGGCCTTGTATCGGGCCTACCATCAATATGAAAATAGTGTCGGTCGAGTTCAGGTTTCTATCGTCGAGC
ACTCGATAGCTCCATTGACCAAGGCTTTTGAAAGAATCAATCTCACATCAGAACTGCCCAGCGATATTTCGACAC
TGCCTGGGATGGTAGATATGGCCATTGACGCGAATTTAATGGCACTCATCGTCTACATGGCGCAAGGCTTGTCGG
GGAGCCTAGAGGCACGGCTTGCCGTCGATTTCACAGGGCCCGAGGTTTATACACACAACGGTCGATATCAAAAAT
ATGCATTCGGACTTCATCTGATCACTCTAGACGGTACAATCTTACTCCAAGTTCCGGTGCCATCCCATCTTGTTT
TAGGCGTTTATGTACGAGGAGGGATACTGACAAGGGGTGTGAAAAAGGCAACCCCGCGTCCAGAAACAATTCACT
CGTGCGGTTCACGGAGATATGCAAATACTTCAGAGAGAGCCCCGACTTCATCAGAGACCCAGCCGCTGGGCGTCT
TGCTGAGAACCTCAGGATCGACCTGAATGCAGACATCTTGAACGCGGTCCTCGTCAATATCACTTTGTCGACGAT
TTCGCATTTCAAACGCTGGCAATCTCCCGTAGACATAAACAAGACTACGTGGGTAACCTCGTACAGCTTTTCTCG
ACCTGAGAACCTTATTCTTCCATACACGATCGCTATCCTGTGTAGCCTGCCGCTCATTGCACTCGGACTGCTCGC
GCTCTACTCGAATGGCGTGCCAGCGATAGACGGGGGCGTTTTCCAACTGCTGATGACAACGCGCGGCTCCCGCAT
GATCGACGAGCTGGCCGCCCGGGGAAGTCTGGGCGGGGAGGAAAACATCCCGCCGGAGCTGAAGAAGCTGGAAGT
TCAGTACGGCCGGCTGCCGGCTTCTCGAGTCGGATGCCGGACTACCGAGGGGCACATAGGGCCGATTGCCGGCTT
TGGGGCCACGATCGAAGTTGTGCCTCTTCGCAAGGCGCCGCGGAAATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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