Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9334
Gene name
LocationContig_670:12291..13763
Strand+
Gene length (bp)1472
Transcript length (bp)1419
Coding sequence length (bp)1419
Protein length (aa) 473

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00320 GATA GATA zinc finger 9.9E-16 428 462
PF08447 PAS_3 PAS fold 7.9E-12 147 216
PF00989 PAS PAS fold 2.7E-06 128 213

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q00858|CGPB_FUSSO Cutinase gene palindrome-binding protein OS=Fusarium solani subsp. pisi PE=2 SV=1 22 469 0.0E+00
sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-2 PE=1 SV=1 24 458 3.0E-177
sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein 3 OS=Dictyostelium discoideum GN=gtaC PE=3 SV=1 428 471 3.0E-11
sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7 OS=Dictyostelium discoideum GN=gtaG PE=3 SV=1 428 464 9.0E-11
sp|Q54TM6|GTAI_DICDI GATA zinc finger domain-containing protein 9 OS=Dictyostelium discoideum GN=gtaI PE=3 SV=1 394 465 2.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q00858|CGPB_FUSSO Cutinase gene palindrome-binding protein OS=Fusarium solani subsp. pisi PE=2 SV=1 22 469 0.0E+00
sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-2 PE=1 SV=1 24 458 3.0E-177
sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein 3 OS=Dictyostelium discoideum GN=gtaC PE=3 SV=1 428 471 3.0E-11
sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7 OS=Dictyostelium discoideum GN=gtaG PE=3 SV=1 428 464 9.0E-11
sp|Q54TM6|GTAI_DICDI GATA zinc finger domain-containing protein 9 OS=Dictyostelium discoideum GN=gtaI PE=3 SV=1 394 465 2.0E-10
sp|Q54HA4|GTAO_DICDI GATA zinc finger domain-containing protein 15 (Fragment) OS=Dictyostelium discoideum GN=gtaO PE=3 SV=1 409 465 2.0E-10
sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein 14 OS=Dictyostelium discoideum GN=gtaN PE=3 SV=1 413 463 2.0E-10
sp|B0G188|GTAP_DICDI GATA zinc finger domain-containing protein 16 OS=Dictyostelium discoideum GN=gtaP PE=3 SV=1 412 462 3.0E-10
sp|Q54NM5|GTAL_DICDI GATA zinc finger domain-containing protein 12 OS=Dictyostelium discoideum GN=gtaL PE=3 SV=1 416 463 4.0E-10
sp|Q75JZ0|GTAH_DICDI GATA zinc finger domain-containing protein 8 OS=Dictyostelium discoideum GN=gtaH PE=3 SV=1 408 463 5.0E-10
sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein 5 OS=Dictyostelium discoideum GN=gtaE PE=3 SV=1 428 466 7.0E-10
sp|Q5KSV0|GTAK_DICDI GATA zinc finger domain-containing protein 11 OS=Dictyostelium discoideum GN=gtaK PE=2 SV=1 399 459 5.0E-09
sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1 427 457 6.0E-09
sp|P40209|GAT2_YEAST Protein GAT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAT2 PE=3 SV=1 415 463 2.0E-08
sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-1 PE=1 SV=2 428 460 2.0E-08
sp|Q9LIB5|GAT17_ARATH GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1 427 471 3.0E-08
sp|Q6QPM2|GAT19_ARATH GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2 428 471 3.0E-08
sp|Q9FJ10|GAT16_ARATH GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1 424 462 4.0E-08
sp|Q9ZPX0|GAT20_ARATH GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2 428 463 5.0E-08
sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1 428 457 5.0E-08
sp|Q59LY1|BRG1_CANAL Biofilm regulator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BRG1 PE=1 SV=1 428 464 6.0E-08
sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2 427 459 7.0E-08
sp|Q8LG10|GAT15_ARATH GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2 422 462 7.0E-08
sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein 10 OS=Dictyostelium discoideum GN=gtaJ PE=3 SV=1 428 463 1.0E-07
sp|Q8LC59|GAT23_ARATH GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2 428 462 1.0E-07
sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1 427 456 2.0E-07
sp|Q9LT45|GAT29_ARATH GATA transcription factor 29 OS=Arabidopsis thaliana GN=GATA29 PE=2 SV=1 428 464 2.0E-07
sp|Q8L4M6|GATA3_ARATH GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2 SV=2 416 456 2.0E-07
sp|Q10F25|GAT18_ORYSJ GATA transcription factor 18 OS=Oryza sativa subsp. japonica GN=GATA18 PE=2 SV=1 423 465 2.0E-07
sp|Q8LC79|GAT18_ARATH GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2 428 463 3.0E-07
sp|P69781|GAT12_ARATH GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1 424 457 3.0E-07
sp|A2XKR7|GAT18_ORYSI GATA transcription factor 18 OS=Oryza sativa subsp. indica GN=GATA18 PE=3 SV=1 423 465 3.0E-07
sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1 428 457 8.0E-07
sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2 428 457 9.0E-07
sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1 428 457 1.0E-06
sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2 425 465 1.0E-06
sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1 428 457 1.0E-06
sp|Q9SKN6|GAT13_ARATH Putative GATA transcription factor 13 OS=Arabidopsis thaliana GN=GATA13 PE=3 SV=2 428 457 2.0E-06
sp|Q9FH57|GATA5_ARATH GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1 401 457 5.0E-06
sp|Q550D5|GTAA_DICDI Transcription factor stalky OS=Dictyostelium discoideum GN=stkA PE=1 SV=1 428 462 6.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0008270 zinc ion binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0043565 sequence-specific DNA binding Yes
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0003674 molecular_function No
GO:0009889 regulation of biosynthetic process No
GO:0051252 regulation of RNA metabolic process No
GO:0003676 nucleic acid binding No
GO:0008150 biological_process No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0050794 regulation of cellular process No
GO:0019222 regulation of metabolic process No
GO:0003677 DNA binding No
GO:0060255 regulation of macromolecule metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0097159 organic cyclic compound binding No
GO:0065007 biological regulation No
GO:0031323 regulation of cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0050789 regulation of biological process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0043167 ion binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1901363 heterocyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
GATA type zinc finger

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9334
MSHRPPPHQATFFGFSNLDLGGHDGSDVMALLDSSLLGPFNDVPMPMDTTDDGAAFDPPPDGASDGALVSNSGVT
DESIARAENQFNTAANNVPGAGPVPPGAFAQMNLSNGSTLTEFTKRRNWPAKVVEELKDFLHILDANGRIKYASP
SVLGVAGYTADEILDVFLKDLIHIDDRGVFVAELNESIASGNPLRMFYRFKRKDGSYAMFEAVGHAHIAAAKFAP
NPNNQSPFCQAVFMMARPYPTKNAGLLDSFLEHKIENERLRRRIAELRREEEADADEAQRQWVQSQEGRSDVTPS
ELTASSSTPLFRSMAGAGGGGGAGGGQSDRSAVDIALTRENLEGAVAGSRPDSLRDKMARYEGSSHTDTIEMLTG
LRYLEGERSRGITTGNASPTLIRGDAGIAIPMDRDSRPGEKKKKLKTTEEYVCTDCGTLDSPEWRKGPSGPKTLC
NACGLRWAKKEKKRNNTNNASQ*
Coding >Hirsu2|9334
ATGTCCCACAGACCACCTCCGCACCAGGCCACCTTCTTCGGCTTCTCCAACCTGGACCTGGGCGGCCACGACGGC
AGCGATGTCATGGCACTCCTAGACAGCAGCCTGCTGGGCCCCTTCAATGACGTGCCCATGCCCATGGACACGACC
GACGACGGCGCCGCCTTCGATCCCCCGCCCGACGGCGCATCCGACGGCGCCCTGGTCAGCAACAGCGGCGTCACG
GACGAGTCCATTGCGCGCGCCGAAAACCAGTTCAACACGGCCGCCAACAACGTGCCCGGCGCCGGGCCCGTGCCG
CCCGGCGCCTTCGCTCAGATGAACCTCTCCAACGGGAGCACGCTGACCGAGTTCACCAAGCGGAGGAACTGGCCG
GCCAAGGTGGTCGAGGAGCTCAAGGATTTCCTCCACATCCTCGACGCCAACGGGCGCATCAAGTACGCCTCGCCC
AGCGTCCTCGGCGTCGCCGGCTACACGGCCGACGAGATCCTCGACGTCTTCCTCAAAGACCTCATCCACATCGAC
GACCGCGGCGTCTTCGTCGCCGAGCTCAACGAGTCCATCGCCTCGGGCAACCCGCTGCGCATGTTCTACCGCTTC
AAGCGCAAGGACGGCTCCTACGCCATGTTCGAGGCCGTCGGCCACGCCCACATCGCCGCCGCCAAGTTCGCGCCC
AACCCCAACAACCAGTCGCCCTTTTGCCAGGCCGTCTTCATGATGGCCCGCCCGTACCCGACCAAGAACGCCGGC
CTGCTCGACTCCTTCCTCGAGCACAAGATCGAGAACGAGCGGCTGCGGCGGCGCATCGCCGAGCTGCGGAGGGAG
GAGGAGGCCGACGCCGACGAGGCTCAGCGCCAGTGGGTGCAGAGCCAGGAGGGTCGCTCCGACGTGACACCGTCG
GAGCTGACGGCCTCGTCGTCGACGCCGCTCTTCCGCTCCATGGCCGGCGCCGGCGGCGGTGGCGGCGCCGGCGGC
GGCCAGTCGGACCGCAGCGCCGTCGACATCGCGCTGACGAGGGAGAACCTCGAGGGCGCCGTGGCCGGGAGCCGG
CCCGACTCGCTGCGCGACAAGATGGCGCGCTACGAGGGCTCGTCGCACACCGACACCATCGAGATGCTGACGGGC
CTGCGCTACCTCGAGGGCGAGCGCAGCCGGGGCATCACGACGGGCAACGCCAGCCCAACGCTCATCCGGGGCGAC
GCGGGCATCGCCATCCCGATGGACCGCGACTCGCGGCCCGGAGAGAAGAAGAAGAAGCTCAAGACGACGGAGGAA
TACGTCTGCACCGACTGCGGCACGCTGGACTCTCCCGAATGGAGAAAGGGGCCGAGCGGGCCCAAGACGCTGTGC
AACGCCTGCGGCCTGCGCTGGGCCAAGAAGGAGAAGAAGAGGAACAACACCAACAACGCATCGCAGTAG
Transcript >Hirsu2|9334
ATGTCCCACAGACCACCTCCGCACCAGGCCACCTTCTTCGGCTTCTCCAACCTGGACCTGGGCGGCCACGACGGC
AGCGATGTCATGGCACTCCTAGACAGCAGCCTGCTGGGCCCCTTCAATGACGTGCCCATGCCCATGGACACGACC
GACGACGGCGCCGCCTTCGATCCCCCGCCCGACGGCGCATCCGACGGCGCCCTGGTCAGCAACAGCGGCGTCACG
GACGAGTCCATTGCGCGCGCCGAAAACCAGTTCAACACGGCCGCCAACAACGTGCCCGGCGCCGGGCCCGTGCCG
CCCGGCGCCTTCGCTCAGATGAACCTCTCCAACGGGAGCACGCTGACCGAGTTCACCAAGCGGAGGAACTGGCCG
GCCAAGGTGGTCGAGGAGCTCAAGGATTTCCTCCACATCCTCGACGCCAACGGGCGCATCAAGTACGCCTCGCCC
AGCGTCCTCGGCGTCGCCGGCTACACGGCCGACGAGATCCTCGACGTCTTCCTCAAAGACCTCATCCACATCGAC
GACCGCGGCGTCTTCGTCGCCGAGCTCAACGAGTCCATCGCCTCGGGCAACCCGCTGCGCATGTTCTACCGCTTC
AAGCGCAAGGACGGCTCCTACGCCATGTTCGAGGCCGTCGGCCACGCCCACATCGCCGCCGCCAAGTTCGCGCCC
AACCCCAACAACCAGTCGCCCTTTTGCCAGGCCGTCTTCATGATGGCCCGCCCGTACCCGACCAAGAACGCCGGC
CTGCTCGACTCCTTCCTCGAGCACAAGATCGAGAACGAGCGGCTGCGGCGGCGCATCGCCGAGCTGCGGAGGGAG
GAGGAGGCCGACGCCGACGAGGCTCAGCGCCAGTGGGTGCAGAGCCAGGAGGGTCGCTCCGACGTGACACCGTCG
GAGCTGACGGCCTCGTCGTCGACGCCGCTCTTCCGCTCCATGGCCGGCGCCGGCGGCGGTGGCGGCGCCGGCGGC
GGCCAGTCGGACCGCAGCGCCGTCGACATCGCGCTGACGAGGGAGAACCTCGAGGGCGCCGTGGCCGGGAGCCGG
CCCGACTCGCTGCGCGACAAGATGGCGCGCTACGAGGGCTCGTCGCACACCGACACCATCGAGATGCTGACGGGC
CTGCGCTACCTCGAGGGCGAGCGCAGCCGGGGCATCACGACGGGCAACGCCAGCCCAACGCTCATCCGGGGCGAC
GCGGGCATCGCCATCCCGATGGACCGCGACTCGCGGCCCGGAGAGAAGAAGAAGAAGCTCAAGACGACGGAGGAA
TACGTCTGCACCGACTGCGGCACGCTGGACTCTCCCGAATGGAGAAAGGGGCCGAGCGGGCCCAAGACGCTGTGC
AACGCCTGCGGCCTGCGCTGGGCCAAGAAGGAGAAGAAGAGGAACAACACCAACAACGCATCGCAGTAG
Gene >Hirsu2|9334
ATGTCCCACAGACCACCTCCGCACCAGGCCACCTTCTTCGGCTTCTCCAACCTGGACCTGGGCGGCCACGACGGC
AGCGATGTCATGGCACTCCTAGACAGCAGCCTGCTGGGCCCCTTCAATGACGTGCCCATGCCCATGGACACGACC
GACGACGGCGCCGCCTTCGATCCCCCGCCCGACGGCGCATCCGACGGCGCCCTGGTCAGCAACAGCGGCGTCACG
GACGAGTCCATTGCGCGCGCCGAAAACCAGTTCAACACGGCCGCCAACAACGTGCCCGGCGCCGGGCCCGTGCCG
CCCGGCGCCTTCGCTCAGATGAACCTCTCCAACGGGAGCACGCTGACCGAGTTCACCAAGCGGAGGAACTGGCCG
GCCAAGGTGGTCGAGGAGCTCAAGGATTTCCTCCACATCCTCGACGCCAACGGGCGCATCAAGTACGCCTCGCCC
AGCGTCCTCGGCGTCGCCGGCTACACGGCCGACGAGATCCTCGACGTCTTCCTCAAAGACCTCATCCACATCGAC
GACCGCGGCGTCTTCGTCGCCGAGCTCAACGAGTCCATCGCCTCGGGCAACCCGCTGCGCATGTTCTACCGCTTC
AAGCGCAAGGACGGCTCCTACGCCATGTTCGAGGCCGTCGGCCACGCCCACATCGCCGCCGCCAAGTTCGCGCCC
AACCCCAACAACCAGTCGCCCTTTTGCCAGGCCGTCTTCATGATGGCCCGCCCGTACCCGACCAAGAACGCCGGC
CTGCTCGACTCCTTCCTCGAGCACAAGATCGAGAACGAGCGGCTGCGGCGGCGCATCGCCGAGCTGCGGAGGGAG
GAGGAGGCCGACGCCGACGAGGCTCAGCGCCAGTGGGTGCAGAGCCAGGAGGGTCGCTCCGACGTGACACCGTCG
GAGCTGACGGCCTCGTCGTCGACGCCGCTCTTCCGCTCCATGGCCGGCGCCGGCGGCGGTGGCGGCGCCGGCGGC
GGCCAGTCGGACCGCAGCGCCGTCGACATCGCGCTGACGAGGGAGAACCTCGAGGGCGCCGTGGCCGGGAGCCGG
CCCGACTCGCTGCGCGACAAGATGGCGCGCTACGAGGGCTCGTCGCACACCGACACCATCGAGATGCTGACGGGC
CTGCGCTACCTCGAGGGCGAGCGCAGCCGGGGCATCACGACGGGCAACGCCAGCCCAACGCTCATCCGGGGCGAC
GCGGGCATCGCCATCCCGATGGACCGCGACTCGCGGCCCGGAGAGAAGAAGAAGAAGCTCAAGACGACGGAGGAA
TACGTCTGCACCGACTGCGGTAGGTGGTCCCCTTCCGATCCCCGGCCGCAGACGACTGACCGGACCCGACAGGCA
CGCTGGACTCTCCCGAATGGAGAAAGGGGCCGAGCGGGCCCAAGACGCTGTGCAACGCCTGCGGCCTGCGCTGGG
CCAAGAAGGAGAAGAAGAGGAACAACACCAACAACGCATCGCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail