Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9323
Gene name
LocationContig_67:16969..17902
Strand-
Gene length (bp)933
Transcript length (bp)861
Coding sequence length (bp)861
Protein length (aa) 287

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 4.7E-16 65 267

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 23 284 3.0E-15
sp|P45798|GUB_RHOMR Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 31 284 1.0E-12
sp|Q9ZG90|KSBGL_SPHMU Keratan-sulfate endo-1,4-beta-galactosidase OS=Sphingobacterium multivorum PE=1 SV=1 108 263 1.0E-09

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9323
MISCRGLAAVLAFLSTASAWDAPNYGGFGRLWQETFAGAPGTSPNRGNWNIIDGNLNVNNEWQTYTSKSRNVQLS
GGQTLQIVPWRDGSALRGWTSGRMESNYLVMPFAGKLTRVEAAVRFGGNPTDRKQGIWPAFWMLGNSIRNGVPWP
SCGEIDIMEAINGQLTGYGTIHCNVNPGGICNEGYGLGASVGIPDQSWHTWRLEIDRRPANWLDQTISWYIDGRL
FHQIRGNRINNFDVWASLCHSPLYVILNLAVGGNWPGAPNGNTLDGYGSMLEVGYVAHYCT*
Coding >Hirsu2|9323
ATGATTTCGTGTCGCGGCCTCGCCGCCGTCCTCGCATTCCTTTCGACTGCCTCCGCCTGGGACGCGCCCAACTAC
GGCGGGTTCGGGCGACTTTGGCAGGAAACCTTCGCCGGGGCGCCTGGGACGTCTCCAAACCGTGGAAACTGGAAC
ATTATTGACGGGAACCTGAACGTCAACAACGAGTGGCAGACTTACACGTCCAAGTCGCGCAACGTCCAGCTTAGC
GGAGGGCAGACGCTGCAAATCGTACCCTGGCGGGATGGGTCTGCGCTGCGCGGATGGACGTCCGGCCGGATGGAG
AGCAACTACCTCGTCATGCCCTTCGCCGGCAAGCTGACACGAGTCGAGGCCGCGGTGCGCTTCGGCGGCAACCCG
ACCGACCGCAAGCAAGGCATCTGGCCCGCCTTCTGGATGCTGGGCAACTCGATCCGGAACGGCGTGCCGTGGCCG
TCCTGCGGCGAGATCGACATCATGGAGGCCATCAACGGCCAGCTAACCGGCTACGGGACGATCCATTGCAACGTC
AACCCCGGCGGCATCTGCAACGAGGGATACGGCCTCGGGGCCTCGGTCGGCATTCCCGACCAGAGCTGGCACACC
TGGAGGCTGGAGATTGACCGCAGGCCCGCCAACTGGCTTGATCAGACTATATCCTGGTACATAGACGGCCGGCTT
TTCCACCAGATCAGGGGCAACCGCATCAACAACTTTGATGTCTGGGCGTCGTTGTGCCATAGCCCTCTCTACGTC
ATTCTCAACCTGGCCGTCGGAGGTAACTGGCCCGGCGCTCCCAACGGCAATACCCTTGATGGGTACGGTAGTATG
CTGGAGGTTGGCTACGTGGCTCATTATTGCACATAG
Transcript >Hirsu2|9323
ATGATTTCGTGTCGCGGCCTCGCCGCCGTCCTCGCATTCCTTTCGACTGCCTCCGCCTGGGACGCGCCCAACTAC
GGCGGGTTCGGGCGACTTTGGCAGGAAACCTTCGCCGGGGCGCCTGGGACGTCTCCAAACCGTGGAAACTGGAAC
ATTATTGACGGGAACCTGAACGTCAACAACGAGTGGCAGACTTACACGTCCAAGTCGCGCAACGTCCAGCTTAGC
GGAGGGCAGACGCTGCAAATCGTACCCTGGCGGGATGGGTCTGCGCTGCGCGGATGGACGTCCGGCCGGATGGAG
AGCAACTACCTCGTCATGCCCTTCGCCGGCAAGCTGACACGAGTCGAGGCCGCGGTGCGCTTCGGCGGCAACCCG
ACCGACCGCAAGCAAGGCATCTGGCCCGCCTTCTGGATGCTGGGCAACTCGATCCGGAACGGCGTGCCGTGGCCG
TCCTGCGGCGAGATCGACATCATGGAGGCCATCAACGGCCAGCTAACCGGCTACGGGACGATCCATTGCAACGTC
AACCCCGGCGGCATCTGCAACGAGGGATACGGCCTCGGGGCCTCGGTCGGCATTCCCGACCAGAGCTGGCACACC
TGGAGGCTGGAGATTGACCGCAGGCCCGCCAACTGGCTTGATCAGACTATATCCTGGTACATAGACGGCCGGCTT
TTCCACCAGATCAGGGGCAACCGCATCAACAACTTTGATGTCTGGGCGTCGTTGTGCCATAGCCCTCTCTACGTC
ATTCTCAACCTGGCCGTCGGAGGTAACTGGCCCGGCGCTCCCAACGGCAATACCCTTGATGGGTACGGTAGTATG
CTGGAGGTTGGCTACGTGGCTCATTATTGCACATAG
Gene >Hirsu2|9323
ATGATTTCGTGTCGCGGCCTCGCCGCCGTCCTCGCATTCCTTTCGACTGCCTCCGCCTGGGACGCGCCCAACTAC
GGCGGGTTCGGGCGACTTTGGCAGGAAACCTTCGCCGGGGCGCCTGGGACGTCTCCAAACCGTGGAAACTGGAAC
ATTATTGACGGGAACCTGAACGTCAACAACGAGTGGCAGACTTACACGTCCAAGTCGCGCAACGTCCAGCTTAGC
GGAGGGCAGACGCTGCAAATCGTACCCTGGCGGGATGGGTCTGCGCTGCGCGGATGGACGTCCGGCCGGATGGAG
AGCAACTACCTCGTCATGCCCTTCGCCGGCAAGCTGACACGAGTCGAGGCCGCGGTGCGCTTCGGCGGCAACCCG
ACCGACCGCAAGCAAGGCATCTGGCCCGCCTTCTGGATGCTGGGCAACTCGATCCGGAACGGCGTGCCGTGGCCG
TCCTGCGGCGAGATCGACATCATGGAGGCCATCAACGGCCAGCTAACCGGCTACGGGACGATCCATTGCAACGTC
AACCCCGGCGGCATCTGCAACGAGGGATACGGCCTCGGGGCCTCGGTCGGCATTCCCGACCAGAGCTGGCACACC
TGGAGGCTGGAGATTGACCGCAGGCCCGCCAACTGGCTTGATCAGACTATATCCTGGTACATAGACGGCCGGCTT
TTCCACCAGATCAGGGGCAACCGCATCAACAACTTTGATGTCTGGGCGTCGTTGTGCCATAGCCCTCTCTACGTC
ATTCTCAACCTGGCCGTCGGAGGTAACTGGGTAAGTGTTGAGGTGCCTTGACAAAGAAGTACCTCTCAAATTTAC
TGACCACATGCGTTCGCTGTTCGCTAGCCCGGCGCTCCCAACGGCAATACCCTTGATGGGTACGGTAGTATGCTG
GAGGTTGGCTACGTGGCTCATTATTGCACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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