Protein ID | Hirsu2|9319 |
Gene name | |
Location | Contig_67:3983..4908 |
Strand | - |
Gene length (bp) | 925 |
Transcript length (bp) | 729 |
Coding sequence length (bp) | 729 |
Protein length (aa) | 243 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00857 | Isochorismatase | Isochorismatase family | 2.0E-11 | 36 | 187 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P21367|YCAC_ECOLI | Uncharacterized protein YcaC OS=Escherichia coli (strain K12) GN=ycaC PE=1 SV=1 | 23 | 200 | 1.0E-51 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1159 | 0.0265 | 0.9182 | 0.0655 | 0.0968 | 0.0202 | 0.3069 | 0.2857 | 0.108 | 0.0147 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999735 |
Orthofinder run ID | 4 |
Orthogroup | 6792 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|3689 |
Ophiocordyceps subramaniannii | Hirsu2|9060 |
Ophiocordyceps subramaniannii | Hirsu2|9319 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9319 MKFSILVAAELLLSLASAATNSTGPYTFDRLNKNDSVLLIVDHQEGLFSVARDFDATSYRQQILAHASLGRLFNL PVVITSSIESGPNGPILSGIRRMYPNTTIIRRQGEVDAWDNAQFRNAVRATGKSQVILAGITTDSCTTFLSLSLR QAGYAVWANAEASGSSSKFVRDLSNDRMSKAGVQVVSLFSIVTDLMRDWRATPGARQVIPWLATWYPAWGEVAEA HSSAVRNGTAVTGEDVL* |
Coding | >Hirsu2|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA |
Transcript | >Hirsu2|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA |
Gene | >Hirsu2|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGTAATTCATCC CGTTATCGAGGGCTGCCTCCGCAGTCGGTTCCTGGAGAGCAAGGCCTGACAAGCTTTTGACACAGGCACGGGCCC TTACACCTTCGACAGGTTGAACAAGAACGACTCCGTACGTATAGCTCTGCAGCCATTCTGGATCCATCGGAAGGA ATATTGACGCCTACGCTGCTCAGGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTGGCCCGGGACT TCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTGCCCGTGGTCA TCACCTCGTCGATTGAGTCCGGTATGCTTCACTCGCCGGCCTCGGCCTCGAGCTTTATGCTGACGATCATAACAC AGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCGAACACGACCATCATCCGCAGGCAGGGAGA GGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCGACGGGCAAGTCTCAGGTTATCCTGGCCGG CATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGGCAAGCCGGTTACGCCGTCTGGGCCAATGC CGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAACGACCGGATGAGCAAGGCCGGTGTGCAGGT GGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGAGCCACCCCTGGCGCCCGCCAGGTCATCCC TTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCTCACTCCTCGGCTGTTCGCAACGGAACCGC GGTCACCGGCGAGGATGTTCTCTAA |