Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9319
Gene name
Location	Contig_67:3983..4908
Strand	-
Gene length (bp)	925
Transcript length (bp)	729
Coding sequence length (bp)	729
Protein length (aa)	243

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00857	Isochorismatase	Isochorismatase family	2.0E-11	36	187

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P21367\|YCAC_ECOLI	Uncharacterized protein YcaC OS=Escherichia coli (strain K12) GN=ycaC PE=1 SV=1	23	200	1.0E-51

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9319 MKFSILVAAELLLSLASAATNSTGPYTFDRLNKNDSVLLIVDHQEGLFSVARDFDATSYRQQILAHASLGRLFNL PVVITSSIESGPNGPILSGIRRMYPNTTIIRRQGEVDAWDNAQFRNAVRATGKSQVILAGITTDSCTTFLSLSLR QAGYAVWANAEASGSSSKFVRDLSNDRMSKAGVQVVSLFSIVTDLMRDWRATPGARQVIPWLATWYPAWGEVAEA HSSAVRNGTAVTGEDVL*
Coding	>Hirsu2\|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Transcript	>Hirsu2\|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Gene	>Hirsu2\|9319 ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGTAATTCATCC CGTTATCGAGGGCTGCCTCCGCAGTCGGTTCCTGGAGAGCAAGGCCTGACAAGCTTTTGACACAGGCACGGGCCC TTACACCTTCGACAGGTTGAACAAGAACGACTCCGTACGTATAGCTCTGCAGCCATTCTGGATCCATCGGAAGGA ATATTGACGCCTACGCTGCTCAGGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTGGCCCGGGACT TCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTGCCCGTGGTCA TCACCTCGTCGATTGAGTCCGGTATGCTTCACTCGCCGGCCTCGGCCTCGAGCTTTATGCTGACGATCATAACAC AGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCGAACACGACCATCATCCGCAGGCAGGGAGA GGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCGACGGGCAAGTCTCAGGTTATCCTGGCCGG CATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGGCAAGCCGGTTACGCCGTCTGGGCCAATGC CGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAACGACCGGATGAGCAAGGCCGGTGTGCAGGT GGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGAGCCACCCCTGGCGCCCGCCAGGTCATCCC TTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCTCACTCCTCGGCTGTTCGCAACGGAACCGC GGTCACCGGCGAGGATGTTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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