Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9319
Gene name
LocationContig_67:3983..4908
Strand-
Gene length (bp)925
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00857 Isochorismatase Isochorismatase family 2.0E-11 36 187

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P21367|YCAC_ECOLI Uncharacterized protein YcaC OS=Escherichia coli (strain K12) GN=ycaC PE=1 SV=1 23 200 1.0E-51

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1159 0.0265 0.9182 0.0655 0.0968 0.0202 0.3069 0.2857 0.108 0.0147

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999735

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6792
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3689
Ophiocordyceps subramaniannii Hirsu2|9060
Ophiocordyceps subramaniannii Hirsu2|9319 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9319
MKFSILVAAELLLSLASAATNSTGPYTFDRLNKNDSVLLIVDHQEGLFSVARDFDATSYRQQILAHASLGRLFNL
PVVITSSIESGPNGPILSGIRRMYPNTTIIRRQGEVDAWDNAQFRNAVRATGKSQVILAGITTDSCTTFLSLSLR
QAGYAVWANAEASGSSSKFVRDLSNDRMSKAGVQVVSLFSIVTDLMRDWRATPGARQVIPWLATWYPAWGEVAEA
HSSAVRNGTAVTGEDVL*
Coding >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT
TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG
GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG
CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG
AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG
ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG
CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC
GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA
GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT
CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Transcript >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT
TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG
GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG
CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG
AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG
ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG
CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC
GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA
GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT
CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Gene >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGTAATTCATCC
CGTTATCGAGGGCTGCCTCCGCAGTCGGTTCCTGGAGAGCAAGGCCTGACAAGCTTTTGACACAGGCACGGGCCC
TTACACCTTCGACAGGTTGAACAAGAACGACTCCGTACGTATAGCTCTGCAGCCATTCTGGATCCATCGGAAGGA
ATATTGACGCCTACGCTGCTCAGGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTGGCCCGGGACT
TCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTGCCCGTGGTCA
TCACCTCGTCGATTGAGTCCGGTATGCTTCACTCGCCGGCCTCGGCCTCGAGCTTTATGCTGACGATCATAACAC
AGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCGAACACGACCATCATCCGCAGGCAGGGAGA
GGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCGACGGGCAAGTCTCAGGTTATCCTGGCCGG
CATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGGCAAGCCGGTTACGCCGTCTGGGCCAATGC
CGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAACGACCGGATGAGCAAGGCCGGTGTGCAGGT
GGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGAGCCACCCCTGGCGCCCGCCAGGTCATCCC
TTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCTCACTCCTCGGCTGTTCGCAACGGAACCGC
GGTCACCGGCGAGGATGTTCTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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