Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9319
Gene name
LocationContig_67:3983..4908
Strand-
Gene length (bp)925
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00857 Isochorismatase Isochorismatase family 1.8E-11 36 187

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P21367|YCAC_ECOLI Uncharacterized protein YcaC OS=Escherichia coli (strain K12) GN=ycaC PE=1 SV=1 23 200 1.0E-51

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9319
MKFSILVAAELLLSLASAATNSTGPYTFDRLNKNDSVLLIVDHQEGLFSVARDFDATSYRQQILAHASLGRLFNL
PVVITSSIESGPNGPILSGIRRMYPNTTIIRRQGEVDAWDNAQFRNAVRATGKSQVILAGITTDSCTTFLSLSLR
QAGYAVWANAEASGSSSKFVRDLSNDRMSKAGVQVVSLFSIVTDLMRDWRATPGARQVIPWLATWYPAWGEVAEA
HSSAVRNGTAVTGEDVL*
Coding >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT
TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG
GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG
CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG
AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG
ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG
CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC
GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA
GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT
CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Transcript >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGCACGGGCCCT
TACACCTTCGACAGGTTGAACAAGAACGACTCCGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTG
GCCCGGGACTTCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTG
CCCGTGGTCATCACCTCGTCGATTGAGTCCGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCG
AACACGACCATCATCCGCAGGCAGGGAGAGGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCG
ACGGGCAAGTCTCAGGTTATCCTGGCCGGCATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGG
CAAGCCGGTTACGCCGTCTGGGCCAATGCCGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAAC
GACCGGATGAGCAAGGCCGGTGTGCAGGTGGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGA
GCCACCCCTGGCGCCCGCCAGGTCATCCCTTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCT
CACTCCTCGGCTGTTCGCAACGGAACCGCGGTCACCGGCGAGGATGTTCTCTAA
Gene >Hirsu2|9319
ATGAAGTTCTCCATCTTGGTCGCAGCGGAGCTGCTGCTCTCGCTGGCCTCCGCCGCCACGAACAGTAATTCATCC
CGTTATCGAGGGCTGCCTCCGCAGTCGGTTCCTGGAGAGCAAGGCCTGACAAGCTTTTGACACAGGCACGGGCCC
TTACACCTTCGACAGGTTGAACAAGAACGACTCCGTACGTATAGCTCTGCAGCCATTCTGGATCCATCGGAAGGA
ATATTGACGCCTACGCTGCTCAGGTGCTCCTGATTGTCGACCACCAAGAGGGGCTGTTCTCCGTGGCCCGGGACT
TCGACGCGACTTCGTACCGGCAGCAGATCCTGGCTCACGCTTCGCTGGGCCGACTTTTCAACCTGCCCGTGGTCA
TCACCTCGTCGATTGAGTCCGGTATGCTTCACTCGCCGGCCTCGGCCTCGAGCTTTATGCTGACGATCATAACAC
AGGTCCCAACGGCCCCATCCTGTCCGGCATCCGACGCATGTACCCGAACACGACCATCATCCGCAGGCAGGGAGA
GGTGGATGCCTGGGACAATGCGCAGTTCCGCAACGCTGTGCGCGCGACGGGCAAGTCTCAGGTTATCCTGGCCGG
CATCACCACCGACTCCTGCACCACCTTCCTGTCTCTGTCCCTCAGGCAAGCCGGTTACGCCGTCTGGGCCAATGC
CGAAGCGTCTGGGTCTTCGTCCAAGTTTGTTCGCGATCTCTCGAACGACCGGATGAGCAAGGCCGGTGTGCAGGT
GGTTAGCCTGTTCTCGATTGTCACGGATCTGATGAGGGACTGGCGAGCCACCCCTGGCGCCCGCCAGGTCATCCC
TTGGTTGGCTACGTGGTACCCGGCTTGGGGTGAGGTGGCTGAGGCTCACTCCTCGGCTGTTCGCAACGGAACCGC
GGTCACCGGCGAGGATGTTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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