© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9314 |
| Gene name | |
| Location | Contig_669:9063..9843 |
| Strand | + |
| Gene length (bp) | 780 |
| Transcript length (bp) | 780 |
| Coding sequence length (bp) | 780 |
| Protein length (aa) | 260 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5356 | 0.5224 | 0.313 | 0.1098 | 0.1918 | 0.0307 | 0.2952 | 0.2325 | 0.1619 | 0.0368 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 33 | 0.913919 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 111 | 133 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 10886 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|9314 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9314 MLLLHATHNCCTAKGTGRAELCLCLCLSLPVFGLTGSRVLSPDESGRQAPTGDSCPNCPPARPPARLPACPPCRV RRDATPTLHINPPLLSAASPAPPPPLSLPALLLLLLLLLFLLFFLLFLLFFLLFLLVISHHHPLLSLFASPPLAS LLHSSSPSPYQHPETLRRLIFQVSLALPRSGCLPRLVALSRQPPFTSAEKKRRSDDPRHAHAVVPTPSAPFVAEQ PELVPQALVQARHCAPDEQGQERRTLRLFAAATT* |
| Coding | >Hirsu2|9314 ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC CTCAGGCTCTTCGCAGCAGCGACGACGTAG |
| Transcript | >Hirsu2|9314 ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC CTCAGGCTCTTCGCAGCAGCGACGACGTAG |
| Gene | >Hirsu2|9314 ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC CTCAGGCTCTTCGCAGCAGCGACGACGTAG |