Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9314
Gene name
LocationContig_669:9063..9843
Strand+
Gene length (bp)780
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5356 0.5224 0.313 0.1098 0.1918 0.0307 0.2952 0.2325 0.1619 0.0368

SignalP

SignalP signal predicted Location Score
Yes 1 - 33 0.913919

Transmembrane Domains

Domain # Start End Length
1 111 133 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10886
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9314 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9314
MLLLHATHNCCTAKGTGRAELCLCLCLSLPVFGLTGSRVLSPDESGRQAPTGDSCPNCPPARPPARLPACPPCRV
RRDATPTLHINPPLLSAASPAPPPPLSLPALLLLLLLLLFLLFFLLFLLFFLLFLLVISHHHPLLSLFASPPLAS
LLHSSSPSPYQHPETLRRLIFQVSLALPRSGCLPRLVALSRQPPFTSAEKKRRSDDPRHAHAVVPTPSAPFVAEQ
PELVPQALVQARHCAPDEQGQERRTLRLFAAATT*
Coding >Hirsu2|9314
ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG
TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC
ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC
CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC
CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC
TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC
CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC
GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA
AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA
CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC
CTCAGGCTCTTCGCAGCAGCGACGACGTAG
Transcript >Hirsu2|9314
ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG
TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC
ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC
CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC
CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC
TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC
CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC
GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA
AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA
CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC
CTCAGGCTCTTCGCAGCAGCGACGACGTAG
Gene >Hirsu2|9314
ATGCTATTGCTGCATGCCACTCACAACTGCTGCACCGCCAAAGGTACTGGAAGAGCCGAGCTGTGCCTGTGCCTG
TGCCTGTCGTTGCCCGTCTTTGGCCTCACTGGGTCCCGAGTCCTGAGTCCTGACGAGTCTGGCCGCCAAGCCCCC
ACGGGCGACTCCTGCCCCAACTGCCCGCCTGCCCGCCCGCCTGCCCGCCTGCCTGCCTGTCCGCCTTGTCGCGTC
CGTCGTGACGCTACTCCGACTCTTCATATTAACCCTCCACTTCTCTCCGCCGCCTCACCTGCTCCTCCCCCTCCC
CTCTCTCTTCCTGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCTTC
TTCCTCCTCTTCCTCCTCGTCATCAGTCATCATCATCCTCTCCTCTCTCTCTTCGCATCTCCTCCCCTCGCCAGC
CTTCTTCATTCTTCCTCCCCTTCGCCTTACCAACATCCTGAAACGCTTCGACGCCTCATCTTCCAAGTCTCTCTC
GCCCTTCCTCGCTCGGGTTGCCTCCCCCGCCTTGTCGCTCTCTCCCGCCAGCCTCCCTTTACCTCGGCCGAAAAA
AAAAGACGATCCGACGACCCGAGGCACGCCCATGCCGTTGTTCCGACACCGTCTGCACCCTTCGTCGCTGAGCAA
CCCGAGCTCGTGCCTCAAGCCCTCGTCCAGGCCCGGCACTGCGCGCCCGACGAGCAAGGACAAGAGAGGCGGACC
CTCAGGCTCTTCGCAGCAGCGACGACGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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