Protein ID | Hirsu2|9308 |
Gene name | |
Location | Contig_668:9100..9589 |
Strand | - |
Gene length (bp) | 489 |
Transcript length (bp) | 489 |
Coding sequence length (bp) | 489 |
Protein length (aa) | 163 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03067 | LPMO_10 | Lytic polysaccharide mono-oxygenase, cellulose-degrading | 7.0E-05 | 11 | 116 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9308 MFPCGGRQLEDNKANVQSFSPGQKINLKAEIPIPHVGPCDVFVMDTKTLKPIGDALIHFDEYADDKLPQLPANNT NFDVQMPKLPDGQCTQPGQCVLQWDWKGKFAKQSYLSCVDFVVGPQSGQQSGQQSGAAAAGSTTSGPDPAGTLAQ QVDQLLKSLGLK* |
Coding | >Hirsu2|9308 ATGTTCCCCTGCGGCGGCAGGCAGCTCGAGGATAACAAGGCCAACGTGCAGAGCTTCAGCCCCGGGCAGAAGATC AACCTCAAGGCCGAGATCCCGATCCCGCACGTCGGCCCGTGCGACGTCTTCGTCATGGACACGAAGACGCTCAAG CCCATCGGCGACGCCCTCATCCACTTCGACGAGTACGCCGACGACAAGCTGCCGCAGCTGCCGGCCAACAACACC AACTTCGACGTCCAGATGCCCAAGCTGCCCGACGGCCAGTGCACCCAGCCGGGCCAGTGCGTCCTGCAGTGGGAC TGGAAGGGCAAGTTCGCCAAGCAGAGCTACCTCAGCTGCGTCGACTTCGTCGTCGGCCCGCAAAGCGGCCAGCAA AGCGGCCAGCAAAGCGGCGCCGCTGCCGCCGGCTCCACCACCTCCGGCCCCGACCCCGCCGGCACCCTCGCTCAG CAGGTCGACCAGCTCCTCAAGAGCCTGGGCCTCAAGTAG |
Transcript | >Hirsu2|9308 ATGTTCCCCTGCGGCGGCAGGCAGCTCGAGGATAACAAGGCCAACGTGCAGAGCTTCAGCCCCGGGCAGAAGATC AACCTCAAGGCCGAGATCCCGATCCCGCACGTCGGCCCGTGCGACGTCTTCGTCATGGACACGAAGACGCTCAAG CCCATCGGCGACGCCCTCATCCACTTCGACGAGTACGCCGACGACAAGCTGCCGCAGCTGCCGGCCAACAACACC AACTTCGACGTCCAGATGCCCAAGCTGCCCGACGGCCAGTGCACCCAGCCGGGCCAGTGCGTCCTGCAGTGGGAC TGGAAGGGCAAGTTCGCCAAGCAGAGCTACCTCAGCTGCGTCGACTTCGTCGTCGGCCCGCAAAGCGGCCAGCAA AGCGGCCAGCAAAGCGGCGCCGCTGCCGCCGGCTCCACCACCTCCGGCCCCGACCCCGCCGGCACCCTCGCTCAG CAGGTCGACCAGCTCCTCAAGAGCCTGGGCCTCAAGTAG |
Gene | >Hirsu2|9308 ATGTTCCCCTGCGGCGGCAGGCAGCTCGAGGATAACAAGGCCAACGTGCAGAGCTTCAGCCCCGGGCAGAAGATC AACCTCAAGGCCGAGATCCCGATCCCGCACGTCGGCCCGTGCGACGTCTTCGTCATGGACACGAAGACGCTCAAG CCCATCGGCGACGCCCTCATCCACTTCGACGAGTACGCCGACGACAAGCTGCCGCAGCTGCCGGCCAACAACACC AACTTCGACGTCCAGATGCCCAAGCTGCCCGACGGCCAGTGCACCCAGCCGGGCCAGTGCGTCCTGCAGTGGGAC TGGAAGGGCAAGTTCGCCAAGCAGAGCTACCTCAGCTGCGTCGACTTCGTCGTCGGCCCGCAAAGCGGCCAGCAA AGCGGCCAGCAAAGCGGCGCCGCTGCCGCCGGCTCCACCACCTCCGGCCCCGACCCCGCCGGCACCCTCGCTCAG CAGGTCGACCAGCTCCTCAAGAGCCTGGGCCTCAAGTAG |