© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|930 |
| Gene name | |
| Location | Contig_1194:730..1473 |
| Strand | - |
| Gene length (bp) | 743 |
| Transcript length (bp) | 483 |
| Coding sequence length (bp) | 483 |
| Protein length (aa) | 161 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05907 | DUF866 | Eukaryotic protein of unknown function (DUF866) | 1.3E-66 | 3 | 158 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74797|YGN3_SCHPO | UPF0587 protein C2D10.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2D10.03c PE=3 SV=1 | 2 | 160 | 1.0E-47 |
| sp|Q9BI88|U587_CAEEL | UPF0587 protein F46B6.12 OS=Caenorhabditis elegans GN=F46B6.12 PE=3 SV=2 | 2 | 153 | 1.0E-32 |
| sp|Q9NWV4|CA123_HUMAN | UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1 | 2 | 153 | 8.0E-30 |
| sp|Q3B8G0|CA123_XENLA | UPF0587 protein C1orf123 homolog OS=Xenopus laevis PE=2 SV=1 | 2 | 154 | 4.0E-29 |
| sp|Q8BHG2|CA123_MOUSE | UPF0587 protein C1orf123 homolog OS=Mus musculus PE=1 SV=1 | 2 | 153 | 1.0E-28 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74797|YGN3_SCHPO | UPF0587 protein C2D10.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2D10.03c PE=3 SV=1 | 2 | 160 | 1.0E-47 |
| sp|Q9BI88|U587_CAEEL | UPF0587 protein F46B6.12 OS=Caenorhabditis elegans GN=F46B6.12 PE=3 SV=2 | 2 | 153 | 1.0E-32 |
| sp|Q9NWV4|CA123_HUMAN | UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1 | 2 | 153 | 8.0E-30 |
| sp|Q3B8G0|CA123_XENLA | UPF0587 protein C1orf123 homolog OS=Xenopus laevis PE=2 SV=1 | 2 | 154 | 4.0E-29 |
| sp|Q8BHG2|CA123_MOUSE | UPF0587 protein C1orf123 homolog OS=Mus musculus PE=1 SV=1 | 2 | 153 | 1.0E-28 |
| sp|Q32P66|CA123_BOVIN | UPF0587 protein C1orf123 homolog OS=Bos taurus PE=2 SV=1 | 4 | 153 | 2.0E-28 |
| sp|Q498R7|CA123_RAT | UPF0587 protein C1orf123 homolog OS=Rattus norvegicus PE=2 SV=1 | 2 | 153 | 2.0E-28 |
| sp|A7SJ66|U587_NEMVE | UPF0587 protein v1g245604 OS=Nematostella vectensis GN=v1g245604 PE=3 SV=1 | 2 | 153 | 8.0E-26 |
| sp|P25654|YCY0_YEAST | UPF0587 protein YCR090C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR090C PE=1 SV=1 | 4 | 159 | 3.0E-23 |
| sp|Q290L7|U587_DROPS | UPF0587 protein GA18326 OS=Drosophila pseudoobscura pseudoobscura GN=GA18326 PE=3 SV=1 | 3 | 150 | 4.0E-15 |
| sp|A1Z9A2|U587_DROME | UPF0587 protein CG4646 OS=Drosophila melanogaster GN=CG4646 PE=2 SV=1 | 3 | 150 | 6.0E-15 |
| sp|Q55C72|U587_DICDI | UPF0587 protein OS=Dictyostelium discoideum GN=DDB_G0270194 PE=3 SV=1 | 3 | 159 | 7.0E-13 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|930 MFALEVKAELAGVTNLRPDDSQDNPFWYMFKVQCTSCRETHGNYVGVNRFETNEMSGSRGEANFVWKCKNCKRES SASIKAAPAPYGQTEPPKSQRLIEFDCRGLEFTEFKPEGEWLAEGVDSGTKFAAIELVDGEWYDYDEKAGEEVSI KDIQWEIRRA* |
| Coding | >Hirsu2|930 ATGTTTGCTCTGGAGGTAAAGGCAGAATTGGCGGGGGTGACCAACTTGCGGCCAGACGATAGTCAGGATAACCCG TTTTGGTACATGTTCAAGGTTCAGTGCACCTCTTGCAGAGAGACGCACGGCAACTACGTGGGCGTCAACCGCTTC GAAACAAACGAGATGAGCGGCAGCCGCGGCGAGGCCAACTTTGTCTGGAAGTGCAAGAACTGCAAGCGCGAGTCG TCGGCGTCCATCAAGGCGGCTCCCGCGCCATACGGCCAGACGGAACCGCCCAAGAGCCAGAGACTGATCGAGTTC GACTGCCGCGGCCTGGAGTTTACCGAGTTCAAGCCCGAGGGGGAATGGCTGGCAGAAGGCGTCGACTCAGGCACC AAGTTCGCGGCCATTGAGCTGGTGGATGGCGAATGGTACGATTATGACGAGAAAGCCGGGGAAGAGGTTAGCATC AAGGACATCCAATGGGAAATCCGTCGAGCCTGA |
| Transcript | >Hirsu2|930 ATGTTTGCTCTGGAGGTAAAGGCAGAATTGGCGGGGGTGACCAACTTGCGGCCAGACGATAGTCAGGATAACCCG TTTTGGTACATGTTCAAGGTTCAGTGCACCTCTTGCAGAGAGACGCACGGCAACTACGTGGGCGTCAACCGCTTC GAAACAAACGAGATGAGCGGCAGCCGCGGCGAGGCCAACTTTGTCTGGAAGTGCAAGAACTGCAAGCGCGAGTCG TCGGCGTCCATCAAGGCGGCTCCCGCGCCATACGGCCAGACGGAACCGCCCAAGAGCCAGAGACTGATCGAGTTC GACTGCCGCGGCCTGGAGTTTACCGAGTTCAAGCCCGAGGGGGAATGGCTGGCAGAAGGCGTCGACTCAGGCACC AAGTTCGCGGCCATTGAGCTGGTGGATGGCGAATGGTACGATTATGACGAGAAAGCCGGGGAAGAGGTTAGCATC AAGGACATCCAATGGGAAATCCGTCGAGCCTGA |
| Gene | >Hirsu2|930 ATGTTTGCTCTGGAGGTAAAGGCAGAATTGGCGGGGTAGGTGCTCGTCCCGCTCGAGGGCACGACGATCGAATCT CATCGTCTCACGCTTCTCCCAAGGGTGACCAACTTGCGGCCAGACGATAGTCAGGATAACCCGTTTTGGTACATG TTCAAGGTTCAGTGCACCTCTTGCAGAGAGACGCACGGCAACTACGTGGGCGTCAACCGCTTCGTACGTTTCTCA GCGGCCCCAATTCCGGCCGGAGCTGGACAATAACATGCCTATCTTCCTCCGCCGCCAGGAAACAAACGAGATGAG CGGCAGCCGCGGCGAGGCCAACTTTGTCTGGAAGTGCAAGAACTGCAAGGCATGTGGCCCTCGAGCACGATGTAG TCGACGGCCGCTGATGCTCTTCCTCTCAGCGCGAGTCGTCGGCGTCCATCAAGGCGGCTCCCGCGCCATACGGCC AGACGGAACCGCCCAAGAGCCAGAGACTGATCGAGTTCGACTGCCGCGGCCTGGAGTTTACCGAGTTCAAGCCCG AGGTGCGTGTCTTTTTGTCCTTCAGATTCCGGACCGGGGCTGATTTTCGTCTTCCTCCAACCACGACCGAACAGG GGGAATGGCTGGCAGAAGGCGTCGACTCAGGCACCAAGTTCGCGGCCATTGAGCTGGTGGATGGCGAATGGTACG ATTATGACGAGAAAGCCGGGGAAGAGGTTAGCATCAAGGACATCCAATGGGAAATCCGTCGAGCCTGA |