Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9280
Gene name
LocationContig_664:9700..12537
Strand+
Gene length (bp)2837
Transcript length (bp)2484
Coding sequence length (bp)2484
Protein length (aa) 828

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04841 Vps16_N Vps16, N-terminal region 6.4E-87 8 410
PF04840 Vps16_C Vps16, C-terminal region 8.0E-83 503 810

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UT38|VPS16_SCHPO Probable vacuolar protein sorting-associated protein 16 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps16 PE=3 SV=1 9 818 0.0E+00
sp|Q55C58|VPS16_DICDI Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2 8 796 2.0E-152
sp|Q920Q4|VPS16_MOUSE Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus GN=Vps16 PE=1 SV=3 8 755 2.0E-138
sp|Q9H269|VPS16_HUMAN Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens GN=VPS16 PE=1 SV=2 8 755 5.0E-137
sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1 OS=Arabidopsis thaliana GN=VCL1 PE=1 SV=1 1 797 3.0E-133
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Swissprot ID Swissprot Description Start End E-value
sp|Q9UT38|VPS16_SCHPO Probable vacuolar protein sorting-associated protein 16 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps16 PE=3 SV=1 9 818 0.0E+00
sp|Q55C58|VPS16_DICDI Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2 8 796 2.0E-152
sp|Q920Q4|VPS16_MOUSE Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus GN=Vps16 PE=1 SV=3 8 755 2.0E-138
sp|Q9H269|VPS16_HUMAN Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens GN=VPS16 PE=1 SV=2 8 755 5.0E-137
sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1 OS=Arabidopsis thaliana GN=VCL1 PE=1 SV=1 1 797 3.0E-133
sp|Q5E9L7|VPS16_BOVIN Vacuolar protein sorting-associated protein 16 homolog OS=Bos taurus GN=VPS16 PE=2 SV=1 8 755 5.0E-133
sp|Q03308|VPS16_YEAST Vacuolar protein sorting-associated protein 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS16 PE=1 SV=2 211 813 4.0E-62
sp|Q11182|VPS16_CAEEL Vacuolar protein sorting-associated protein 16 homolog OS=Caenorhabditis elegans GN=vps-16 PE=3 SV=2 13 746 6.0E-23
sp|Q60V75|VPS16_CAEBR Vacuolar protein sorting-associated protein 16 homolog OS=Caenorhabditis briggsae GN=vps-16 PE=3 SV=1 13 746 7.0E-23
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GO

GO Term Description Terminal node
GO:0005737 cytoplasm Yes
GO:0006886 intracellular protein transport Yes
GO:0015031 protein transport No
GO:0005575 cellular_component No
GO:0051641 cellular localization No
GO:0051649 establishment of localization in cell No
GO:0044424 intracellular part No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0045184 establishment of protein localization No
GO:0046907 intracellular transport No
GO:0015833 peptide transport No
GO:0033036 macromolecule localization No
GO:0071705 nitrogen compound transport No
GO:0044464 cell part No
GO:0071702 organic substance transport No
GO:0008150 biological_process No
GO:0008104 protein localization No
GO:0042886 amide transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9280
MDSLHARADWESVGDKWFRKTQQYTAVFDQDLDLDSFIVAGAPCAGALALWRDDTKLLAHQPGMSTKPSIDIYSL
AGKKLRSIPWDKTVIRGLGWSEEESLLVVTADGNVRCYDLQGDFSNFSLGHGADNYGVESCRFYDTGMVALLGNN
SLVAVSSYTEPRPKLLAACPDGTIHSWAIISPDHTLSRSVEAVLSVGSTVYVVDGTDCEDRLLDIGPFSHISVSP
DGRYVNLYGANGKAHIVSSDFQDKLFEHNSDSQTPPKYVEWCGSDALIAWEDEVHIIGPGDQSSTFIYESTRVHV
VSEYDGARLITNDFCEFLERVPNDTMEVLGHASESSPASILLDAVGQLERESPKADDYIQLIRPNLTEAVDTCVN
AAGREFDTRWQKRLLRAASFGKSVLDIYNSDEFVDMCETLRVLNAVRDFEIGIPLSYEQYHRLTPERLIQRLLNR
HDYLLALKIAGHLRLPSDRIYVHWACSKVRVGAEDDETVCRLVVERLSGKPGVSFEEIARAAYHEGRARLATELL
NHEARGGRQVPLLLDMEEDELALDKAIESGDTDLMLVVLMQLKKKLPLAAFFRVINARPTATAMVEAAAAREGDN
ALLKDLYYQDDRRADGASVFIRESLRQPDARTASDKLALAAKLLADTKESTVELHALKEATGLLRMQEALSRDLA
ETFTGLSVNETLFKLIRLGLNGQAKKVQSEFKVPDKVAWWIRLRALVAKRDWNEIEEMAKTKKSPIGWEPFFNLT
LQAGNPRLAAVFIPKCTGLAAGESISMYDKCGLRVRAAEEAVRLRDGEAWQRLLDAAGRNSPEGREIERLGAAAF
RK*
Coding >Hirsu2|9280
ATGGACTCTCTGCACGCGAGAGCTGACTGGGAGAGTGTCGGCGACAAGTGGTTCCGCAAGACGCAGCAGTACACG
GCCGTCTTCGACCAGGACCTCGACCTCGACAGCTTCATCGTTGCCGGAGCGCCCTGCGCTGGAGCCCTAGCACTA
TGGCGGGACGACACCAAGCTGCTGGCGCACCAGCCGGGCATGTCGACAAAGCCGTCGATCGACATCTACAGCCTG
GCTGGCAAGAAGCTGCGCAGCATACCGTGGGATAAAACGGTCATCAGGGGCCTCGGATGGTCGGAGGAGGAATCT
CTGCTCGTCGTGACGGCCGACGGCAACGTGCGCTGCTACGACCTCCAGGGCGACTTCAGCAACTTTTCTCTGGGC
CACGGTGCCGATAACTACGGCGTCGAGTCGTGTCGATTCTACGATACCGGCATGGTCGCCCTCTTGGGCAACAAC
TCGTTAGTGGCCGTCTCTTCCTACACCGAGCCTCGACCGAAGCTGCTGGCGGCCTGCCCCGACGGCACGATCCAC
TCGTGGGCCATCATATCGCCCGACCACACGCTGTCGCGGTCGGTCGAGGCGGTGCTGAGCGTCGGGTCGACCGTC
TACGTCGTCGACGGCACCGACTGCGAAGACAGGTTGCTGGACATCGGCCCCTTCAGCCACATCAGCGTGTCGCCA
GACGGGCGATATGTGAACCTGTACGGAGCCAACGGCAAGGCGCACATCGTCTCGAGCGACTTCCAGGACAAGCTG
TTCGAGCACAACTCGGACTCGCAGACGCCGCCCAAGTACGTCGAGTGGTGCGGCAGCGATGCGCTCATTGCGTGG
GAGGACGAGGTGCACATCATCGGACCCGGGGACCAGTCCTCGACTTTCATCTACGAGAGCACCCGAGTCCACGTC
GTCTCTGAATACGACGGTGCTCGGCTCATCACAAACGACTTTTGCGAGTTCCTGGAGAGGGTGCCCAACGACACG
ATGGAGGTGCTGGGTCACGCGTCAGAGTCGTCGCCGGCGTCGATCCTCCTCGACGCAGTCGGCCAGCTGGAGCGC
GAGTCGCCCAAGGCGGACGACTACATCCAGCTCATCCGGCCCAACCTGACCGAGGCAGTTGACACGTGCGTCAAT
GCGGCCGGCCGCGAGTTCGACACGCGGTGGCAAAAGAGGCTGCTCAGGGCGGCGTCGTTTGGCAAATCGGTGCTC
GACATCTACAACAGCGACGAGTTCGTCGACATGTGCGAGACGTTGCGCGTCCTCAACGCCGTCCGAGACTTCGAG
ATCGGCATCCCGCTGTCGTACGAGCAGTACCACCGGCTGACGCCCGAGAGACTAATCCAGCGGCTGCTCAACCGC
CACGACTACCTGCTCGCCCTCAAGATCGCGGGCCACCTGCGCCTGCCGTCGGACCGCATCTACGTGCACTGGGCC
TGCTCCAAGGTCCGCGTCGGCGCCGAGGACGACGAGACGGTCTGCCGGCTGGTGGTGGAGAGGCTCTCGGGCAAG
CCCGGCGTCTCGTTTGAGGAGATTGCGCGGGCGGCCTACCACGAGGGCCGGGCGCGGCTGGCGACGGAGCTGCTG
AACCACGAGGCGCGCGGCGGGCGGCAGGTGCCTCTCCTGCTGGACATGGAGGAGGACGAGCTGGCGCTGGACAAG
GCCATCGAGAGCGGGGACACGGACCTGATGCTGGTGGTGCTGATGCAGCTGAAGAAGAAGCTGCCGCTGGCGGCC
TTCTTCCGCGTCATCAACGCCCGGCCGACGGCGACGGCGATGGTGGAGGCGGCGGCGGCGAGGGAGGGCGACAAC
GCGCTACTCAAGGATCTATATTACCAGGACGACCGGCGGGCGGATGGGGCGAGCGTCTTCATCCGAGAGTCGCTC
CGCCAGCCGGACGCGCGCACGGCGTCGGACAAGCTGGCGCTGGCGGCCAAGCTGCTGGCGGACACGAAGGAGTCG
ACGGTCGAGCTGCACGCGCTCAAGGAGGCGACGGGCCTGCTGCGGATGCAGGAGGCGCTGAGCCGAGACCTGGCG
GAGACGTTCACGGGGCTCAGCGTCAACGAGACGCTCTTCAAGCTGATCCGGCTCGGGCTCAACGGCCAGGCCAAG
AAGGTGCAGAGCGAGTTCAAGGTGCCGGACAAGGTGGCCTGGTGGATCCGGCTCCGGGCCCTGGTGGCGAAGCGG
GACTGGAACGAGATTGAGGAGATGGCCAAGACGAAGAAAAGCCCGATCGGGTGGGAGCCCTTCTTCAACCTCACG
CTGCAGGCGGGCAACCCGCGGCTGGCGGCCGTCTTCATCCCCAAGTGCACGGGGCTGGCGGCGGGCGAGAGCATC
AGCATGTACGACAAGTGCGGACTGCGCGTCCGGGCGGCGGAGGAGGCGGTGCGGCTCCGGGACGGCGAGGCGTGG
CAGCGGCTGCTGGACGCGGCCGGGCGCAACTCGCCCGAGGGCCGCGAGATCGAGAGGCTGGGCGCGGCGGCGTTT
AGGAAGTAG
Transcript >Hirsu2|9280
ATGGACTCTCTGCACGCGAGAGCTGACTGGGAGAGTGTCGGCGACAAGTGGTTCCGCAAGACGCAGCAGTACACG
GCCGTCTTCGACCAGGACCTCGACCTCGACAGCTTCATCGTTGCCGGAGCGCCCTGCGCTGGAGCCCTAGCACTA
TGGCGGGACGACACCAAGCTGCTGGCGCACCAGCCGGGCATGTCGACAAAGCCGTCGATCGACATCTACAGCCTG
GCTGGCAAGAAGCTGCGCAGCATACCGTGGGATAAAACGGTCATCAGGGGCCTCGGATGGTCGGAGGAGGAATCT
CTGCTCGTCGTGACGGCCGACGGCAACGTGCGCTGCTACGACCTCCAGGGCGACTTCAGCAACTTTTCTCTGGGC
CACGGTGCCGATAACTACGGCGTCGAGTCGTGTCGATTCTACGATACCGGCATGGTCGCCCTCTTGGGCAACAAC
TCGTTAGTGGCCGTCTCTTCCTACACCGAGCCTCGACCGAAGCTGCTGGCGGCCTGCCCCGACGGCACGATCCAC
TCGTGGGCCATCATATCGCCCGACCACACGCTGTCGCGGTCGGTCGAGGCGGTGCTGAGCGTCGGGTCGACCGTC
TACGTCGTCGACGGCACCGACTGCGAAGACAGGTTGCTGGACATCGGCCCCTTCAGCCACATCAGCGTGTCGCCA
GACGGGCGATATGTGAACCTGTACGGAGCCAACGGCAAGGCGCACATCGTCTCGAGCGACTTCCAGGACAAGCTG
TTCGAGCACAACTCGGACTCGCAGACGCCGCCCAAGTACGTCGAGTGGTGCGGCAGCGATGCGCTCATTGCGTGG
GAGGACGAGGTGCACATCATCGGACCCGGGGACCAGTCCTCGACTTTCATCTACGAGAGCACCCGAGTCCACGTC
GTCTCTGAATACGACGGTGCTCGGCTCATCACAAACGACTTTTGCGAGTTCCTGGAGAGGGTGCCCAACGACACG
ATGGAGGTGCTGGGTCACGCGTCAGAGTCGTCGCCGGCGTCGATCCTCCTCGACGCAGTCGGCCAGCTGGAGCGC
GAGTCGCCCAAGGCGGACGACTACATCCAGCTCATCCGGCCCAACCTGACCGAGGCAGTTGACACGTGCGTCAAT
GCGGCCGGCCGCGAGTTCGACACGCGGTGGCAAAAGAGGCTGCTCAGGGCGGCGTCGTTTGGCAAATCGGTGCTC
GACATCTACAACAGCGACGAGTTCGTCGACATGTGCGAGACGTTGCGCGTCCTCAACGCCGTCCGAGACTTCGAG
ATCGGCATCCCGCTGTCGTACGAGCAGTACCACCGGCTGACGCCCGAGAGACTAATCCAGCGGCTGCTCAACCGC
CACGACTACCTGCTCGCCCTCAAGATCGCGGGCCACCTGCGCCTGCCGTCGGACCGCATCTACGTGCACTGGGCC
TGCTCCAAGGTCCGCGTCGGCGCCGAGGACGACGAGACGGTCTGCCGGCTGGTGGTGGAGAGGCTCTCGGGCAAG
CCCGGCGTCTCGTTTGAGGAGATTGCGCGGGCGGCCTACCACGAGGGCCGGGCGCGGCTGGCGACGGAGCTGCTG
AACCACGAGGCGCGCGGCGGGCGGCAGGTGCCTCTCCTGCTGGACATGGAGGAGGACGAGCTGGCGCTGGACAAG
GCCATCGAGAGCGGGGACACGGACCTGATGCTGGTGGTGCTGATGCAGCTGAAGAAGAAGCTGCCGCTGGCGGCC
TTCTTCCGCGTCATCAACGCCCGGCCGACGGCGACGGCGATGGTGGAGGCGGCGGCGGCGAGGGAGGGCGACAAC
GCGCTACTCAAGGATCTATATTACCAGGACGACCGGCGGGCGGATGGGGCGAGCGTCTTCATCCGAGAGTCGCTC
CGCCAGCCGGACGCGCGCACGGCGTCGGACAAGCTGGCGCTGGCGGCCAAGCTGCTGGCGGACACGAAGGAGTCG
ACGGTCGAGCTGCACGCGCTCAAGGAGGCGACGGGCCTGCTGCGGATGCAGGAGGCGCTGAGCCGAGACCTGGCG
GAGACGTTCACGGGGCTCAGCGTCAACGAGACGCTCTTCAAGCTGATCCGGCTCGGGCTCAACGGCCAGGCCAAG
AAGGTGCAGAGCGAGTTCAAGGTGCCGGACAAGGTGGCCTGGTGGATCCGGCTCCGGGCCCTGGTGGCGAAGCGG
GACTGGAACGAGATTGAGGAGATGGCCAAGACGAAGAAAAGCCCGATCGGGTGGGAGCCCTTCTTCAACCTCACG
CTGCAGGCGGGCAACCCGCGGCTGGCGGCCGTCTTCATCCCCAAGTGCACGGGGCTGGCGGCGGGCGAGAGCATC
AGCATGTACGACAAGTGCGGACTGCGCGTCCGGGCGGCGGAGGAGGCGGTGCGGCTCCGGGACGGCGAGGCGTGG
CAGCGGCTGCTGGACGCGGCCGGGCGCAACTCGCCCGAGGGCCGCGAGATCGAGAGGCTGGGCGCGGCGGCGTTT
AGGAAGTAG
Gene >Hirsu2|9280
ATGGACTCTCTGCACGCGAGAGCTGACTGGGAGAGTGTCGGCGACAAGTGGTTCCGCAAGACGCAGCAGTACACG
GCCGTCTTCGACCAGGACCTCGACCTCGACAGCTTCATCGTTGCCGGAGCGCCCTGCGCTGGAGCCCTAGGTATC
GTCCTCTTCGAGCTGCCTCGCGAGTCCGGAGGCGAGGCTTCGAGAAGGAAGAATGGCTGACGGGTGACAGCACTA
TGGCGGGACGACACCAAGCTGCTGGCGCACCAGCCGGGCATGTCGACAAAGCCGTCGATCGACATCTACAGCCTG
GCTGGCAAGAAGCTGCGCAGCATACCGTGGGATAAAACGGTCATCAGGGGCCTCGGATGGTCGGAGGAGGAATCT
CTGCTCGTCGTGACGGCCGACGGCAACGTGCGCTGCTACGACCTCCAGGGCGACTTCAGCAACTTTTCTCTGGGC
CACGGTGCCGATAACTACGGCGTCGAGTCGTGTCGGTACGCTGGTGCGGCTCGCGAGGCCCGGGATCTCGGCTCA
CGCTTCCCAGATTCTACGATACCGGCATGGTCGCCCTCTTGGGCAACAACTCGTTAGTGGCCGTCTCTTCCTACA
CCGAGCCTCGACCGAAGCTGCTGGCGGCCTGCCCCGACGGCACGATCCACTCGTGGGCCATCATATCGCCCGACC
ACACGCTGTCGCGGTCGGTCGAGGCGGTGCTGAGCGTCGGGTCGACCGTCTACGTCGTCGACGGCACCGACTGCG
AAGACAGGTTGCTGGACATCGGCCCCTTCAGCCACATCAGCGTGTCGCCAGACGGGCGATATGTGAACCTGTACG
GAGCCAACGGCAAGGCGCACATCGTCTCGAGCGACTTCCAGGACAAGCTGTTCGAGCACAACTCGGACTCGCAGA
CGCCGCCCAAGTACGTCGAGTGGTGCGGCAGCGATGCGCTCATTGCGTGGGAGGACGAGGTGCACATCATCGGAC
CCGGGGACCAGTCCTCGACTTTCATCTACGAGAGCACCCGAGTCCACGTCGTCTCTGGTGAGCAGACTTGGCCCC
CTCCCCCATCGCCCCGTCGCCGGCCGTAATGCGTCTGTTGACCCGAGGTAGAATACGACGGTGCTCGGCTCATCA
CAAACGACTTTTGCGAGTTCCTGGAGAGGGTGCCCAACGACACGATGGAGGTGCTGGGTCACGCGTCAGAGTCGT
CGCCGGCGTCGATCCTCCTCGACGCAGTCGGCCAGCTGGAGCGCGAGTCGCCCAAGGCGGACGACTACATCCAGC
TCATCCGGCCCAACCTGACCGAGGCAGTTGACACGTGCGTCAATGCGGCCGGCCGCGAGTTCGACACGCGGTGGC
AAAAGAGGCTGCTCAGGGCGGCGTCGTTTGGCAAATCGGTGCTCGACATCTACAACAGCGACGAGTTCGTCGACA
TGTGCGAGACGTTGCGCGTCCTCAACGCCGTCCGAGACTTCGAGATCGGCATCCCGCTGTCGTACGAGCAGTACC
ACCGGCTGACGCCCGAGAGACTAATCCAGCGGCTGCTCAACCGCCACGACTACCTGCTCGCCCTCAAGATCGCGG
GCCACCTGCGCCTGCCGTCGGACCGCATCTACGTGCACTGGGCCTGCTCCAAGGTCCGCGTCGGCGCCGAGGACG
ACGAGACGGTCTGCCGGCTGGTGGTGGAGAGGCTCTCGGGCAAGCCCGGCGTCTCGTTTGAGGAGATTGCGCGGG
CGGCCTACCACGAGGGCCGGGCGCGGCTGGCGACGGAGCTGCTGAACCACGAGGCGCGCGGCGGGCGGCAGGTGC
CTCTCCTGCTGGACATGGAGGAGGACGAGCTGGCGCTGGACAAGGCCATCGAGAGCGGGGACACGGACCTGATGC
TGGTGGTGCTGATGCAGCTGAAGAAGAAGCTGCCGCTGGCGGCCTTCTTCCGCGTCATCAACGCCCGGCCGACGG
CGACGGCGATGGTGGAGGCGGCGGCGGCGAGGGAGGGCGACAACGCGCTACTCAAGGATCTATATTACCAGGACG
ACCGGCGGGCGGATGGGGCGAGCGTCTTCATCCGAGAGTCGCTCCGCCAGCCGGACGCGCGCACGGCGTCGGACA
AGCTGGCGCTGGCGGCCAAGCTGCTGGCGGACACGAAGGAGTCGACGGTCGAGCTGCACGCGCTCAAGGAGGCGA
CGGGCCTGCTGCGGATGCAGGAGGCGCTGAGCCGAGACCTGGCGGAGACGTTCACGGGGCTCAGCGTCAACGAGA
CGCTCTTCAAGCTGATCCGGCTCGGGCTCAACGGCCAGGCCAAGAAGGTGCAGAGCGAGTTCAAGGTGCCGGACA
AGGTGGCCTGGTGGATCCGGTACGTGAGAGCCCGAGGACAAGGGAGGGAGAGAGAGAGGCGGCCCAAGCAGGCCG
GACTGCAGCAACCGACTGACATGCCTCTGCAGGCTCCGGGCCCTGGTGGCGAAGCGGGACTGGAACGAGATTGAG
GAGATGGCCAAGACGAAGAAAAGCCCGATCGGGTGGGAGGTGAGCGAAGGCGAAGGTCCCGCGAGACGTGCCGTT
TTTGGCTGACGAAACGAAACCACACCCGCCCCCAGCCCTTCTTCAACCTCACGCTGCAGGCGGGCAACCCGCGGC
TGGCGGCCGTCTTCATCCCCAAGTGCACGGGGCTGGCGGCGGGCGAGAGCATCAGCATGTACGACAAGTGCGGAC
TGCGCGTCCGGGCGGCGGAGGAGGCGGTGCGGCTCCGGGACGGCGAGGCGTGGCAGCGGCTGCTGGACGCGGCCG
GGCGCAACTCGCCCGAGGGCCGCGAGATCGAGAGGCTGGGCGCGGCGGCGTTTAGGAAGTAG

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