© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9269 |
| Gene name | |
| Location | Contig_663:1156..2733 |
| Strand | - |
| Gene length (bp) | 1577 |
| Transcript length (bp) | 1428 |
| Coding sequence length (bp) | 1428 |
| Protein length (aa) | 476 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00487 | FA_desaturase | Fatty acid desaturase | 1.4E-18 | 84 | 298 |
| PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 3.7E-17 | 361 | 425 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94523|ACO1_SCHPO | Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1281.06c PE=3 SV=1 | 30 | 474 | 0.0E+00 |
| sp|Q12618|ACO1_AJECA | Acyl-CoA desaturase OS=Ajellomyces capsulatus GN=OLE1 PE=1 SV=1 | 1 | 475 | 0.0E+00 |
| sp|P21147|ACO1_YEAST | Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OLE1 PE=1 SV=2 | 34 | 426 | 5.0E-158 |
| sp|G5EGH6|FAT7_CAEEL | Delta(9)-fatty-acid desaturase fat-7 OS=Caenorhabditis elegans GN=fat-7 PE=2 SV=1 | 32 | 331 | 2.0E-60 |
| sp|G5EGN2|FAT6_CAEEL | Delta(9)-fatty-acid desaturase fat-6 OS=Caenorhabditis elegans GN=fat-6 PE=2 SV=1 | 80 | 313 | 9.0E-60 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94523|ACO1_SCHPO | Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1281.06c PE=3 SV=1 | 30 | 474 | 0.0E+00 |
| sp|Q12618|ACO1_AJECA | Acyl-CoA desaturase OS=Ajellomyces capsulatus GN=OLE1 PE=1 SV=1 | 1 | 475 | 0.0E+00 |
| sp|P21147|ACO1_YEAST | Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OLE1 PE=1 SV=2 | 34 | 426 | 5.0E-158 |
| sp|G5EGH6|FAT7_CAEEL | Delta(9)-fatty-acid desaturase fat-7 OS=Caenorhabditis elegans GN=fat-7 PE=2 SV=1 | 32 | 331 | 2.0E-60 |
| sp|G5EGN2|FAT6_CAEEL | Delta(9)-fatty-acid desaturase fat-6 OS=Caenorhabditis elegans GN=fat-6 PE=2 SV=1 | 80 | 313 | 9.0E-60 |
| sp|P13516|ACOD1_MOUSE | Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=1 SV=2 | 54 | 314 | 1.0E-59 |
| sp|Q2KIA4|SCD5_BOVIN | Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1 | 52 | 326 | 2.0E-58 |
| sp|Q86SK9|SCD5_HUMAN | Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=1 SV=2 | 50 | 326 | 3.0E-58 |
| sp|Q99PL7|SCD3_MOUSE | Acyl-CoA desaturase 3 OS=Mus musculus GN=Scd3 PE=1 SV=1 | 54 | 314 | 7.0E-58 |
| sp|O00767|ACOD_HUMAN | Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2 | 54 | 314 | 1.0E-57 |
| sp|P13011|ACOD2_MOUSE | Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=1 SV=2 | 54 | 314 | 2.0E-57 |
| sp|Q6P7B9|ACOD2_RAT | Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1 | 54 | 314 | 9.0E-57 |
| sp|Q95MI7|ACOD_CAPHI | Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1 | 54 | 314 | 2.0E-56 |
| sp|O62849|ACOD_SHEEP | Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1 | 54 | 314 | 1.0E-55 |
| sp|P07308|ACOD1_RAT | Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=1 SV=2 | 54 | 314 | 1.0E-55 |
| sp|G5ED44|FAT5_CAEEL | Delta(9)-fatty-acid desaturase fat-5 OS=Caenorhabditis elegans GN=fat-5 PE=2 SV=1 | 52 | 322 | 2.0E-55 |
| sp|O02858|ACOD_PIG | Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1 | 54 | 314 | 4.0E-55 |
| sp|Q64420|ACOD_MESAU | Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1 | 54 | 314 | 1.0E-54 |
| sp|Q9TT94|ACOD_BOVIN | Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2 | 54 | 314 | 7.0E-54 |
| sp|Q6T707|SCD4_MOUSE | Acyl-CoA desaturase 4 OS=Mus musculus GN=Scd4 PE=1 SV=1 | 3 | 314 | 1.0E-53 |
| sp|Q92038|ACOD_CYPCA | Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2 | 52 | 327 | 3.0E-50 |
| sp|Q6US81|ACO11_SPOLI | Acyl-CoA Delta(11) desaturase OS=Spodoptera littoralis PE=1 SV=1 | 60 | 331 | 3.0E-48 |
| sp|Q75PL7|DESAT_BOMMO | (11Z)-hexadec-11-enoyl-CoA conjugase OS=Bombyx mori GN=desat1 PE=1 SV=1 | 12 | 322 | 8.0E-48 |
| sp|Q8ISS3|ACO11_CHORO | Acyl-CoA Delta(11) desaturase OS=Choristoneura rosaceana PE=1 SV=1 | 16 | 327 | 1.0E-47 |
| sp|O44390|ACO11_TRINI | Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=1 SV=2 | 66 | 355 | 7.0E-46 |
| sp|Q9FV68|ICO5D_LIMDO | Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii PE=1 SV=1 | 83 | 313 | 3.0E-31 |
| sp|O65797|ADS1_ARATH | Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1 | 57 | 313 | 3.0E-29 |
| sp|Q9LMI4|ADSL4_ARATH | Delta-9 desaturase-like 4 protein OS=Arabidopsis thaliana GN=At1g06350 PE=2 SV=2 | 62 | 325 | 4.0E-29 |
| sp|Q949X0|ADS3_ARATH | Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2 | 59 | 325 | 2.0E-28 |
| sp|Q9SID2|ADS2_ARATH | Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2 | 58 | 313 | 4.0E-28 |
| sp|Q9LMI3|ADSL5_ARATH | Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana GN=At1g06360 PE=2 SV=1 | 62 | 325 | 2.0E-27 |
| sp|Q9LND8|ADSL2_ARATH | Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana GN=At1g06100 PE=2 SV=1 | 1 | 313 | 5.0E-27 |
| sp|Q9LVZ3|ADS32_ARATH | Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2 SV=3 | 53 | 313 | 1.0E-26 |
| sp|Q9LND9|ADSL1_ARATH | Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1 | 83 | 313 | 6.0E-24 |
| sp|Q9FPD5|ADSL3_ARATH | Delta-9 desaturase-like 3 protein OS=Arabidopsis thaliana GN=At1g06120 PE=2 SV=1 | 83 | 313 | 2.0E-23 |
| sp|Q42342|CYB5E_ARATH | Cytochrome b5 isoform E OS=Arabidopsis thaliana GN=CYTB5-E PE=1 SV=2 | 350 | 423 | 3.0E-06 |
| sp|P40934|CYB5_BRAOB | Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1 | 350 | 423 | 6.0E-06 |
| sp|P49098|CYB5_TOBAC | Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1 | 367 | 423 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006629 | lipid metabolic process | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 60 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 78 | 100 | 22 |
| 3 | 198 | 220 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9269 MSEASSSAAQAQAKAFPDGTTDYKPLRSSKFDPSKVHIADTPMTWSNWHKHVNWLNTTLIIFIPMIGFISAYWVP LRLYTAIFAVIYYFNAGLGITAGYHRLWAHTSYKATLPLKIYLAAVGAGAVEGSIRWWSREHRAHHRYTDTEKDP YSVRKGLLYSHIGWMVFKQNPKRTGRTDITDLNEDPVVVWQHRNYLKSVIFMALVFPTLFCGLLWNDWLGGFVYG GILRICFVQQATFCVNSLAHWLGDQPFDDRNSPRDHVITALVTLGEGYHNFHHEFPSDYRNAIEWYQYDPTKWCI RMWKSLGLAYDLKQFRANEIEKGRVQQMQKKLDQKRATLDWGTPLEQLPVISWDDFVDGTKNGKALIAIAGVIHD VTAFIKDHPGGKALISSAIGKDATAIFNGGVYNHSNAAHNLLSTMRVGVLRGGCEVEIWKRAQFENKDVTYMNDS AGQRIVRAGAQATKVIQPVASADAA* |
| Coding | >Hirsu2|9269 ATGTCTGAAGCTTCCTCCTCGGCCGCCCAGGCCCAGGCCAAAGCCTTCCCGGACGGCACGACCGACTACAAGCCG CTGCGGTCCAGCAAGTTCGATCCCAGCAAGGTTCACATCGCCGACACGCCCATGACGTGGTCCAACTGGCACAAG CACGTCAACTGGCTGAACACGACGCTCATCATCTTCATCCCCATGATCGGCTTCATCTCCGCCTACTGGGTCCCT CTCCGCCTCTACACCGCCATCTTCGCCGTCATCTACTACTTCAACGCCGGCCTCGGCATCACAGCCGGATACCAC CGCCTCTGGGCACACACCTCGTACAAAGCCACCCTCCCCCTCAAGATCTACCTCGCCGCTGTCGGTGCTGGCGCC GTCGAAGGCTCCATCCGTTGGTGGTCAAGGGAGCACCGCGCCCACCACCGATACACCGACACCGAGAAGGACCCC TACTCCGTTCGCAAGGGCCTGCTCTACTCCCACATCGGCTGGATGGTCTTCAAGCAGAACCCTAAGCGCACCGGA CGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACCGCAACTACCTCAAGTCGGTCATC TTCATGGCCCTCGTCTTCCCCACCCTCTTCTGCGGCCTCCTGTGGAACGATTGGCTTGGCGGCTTCGTCTACGGC GGCATCCTCCGCATCTGCTTCGTCCAGCAGGCCACCTTCTGCGTCAACTCCCTGGCCCACTGGCTGGGTGACCAG CCCTTCGATGACCGCAACTCGCCTCGCGACCATGTCATCACGGCCCTCGTCACCCTCGGAGAGGGCTACCACAAC TTCCACCACGAGTTCCCCTCGGACTACCGCAACGCCATCGAGTGGTATCAGTACGACCCGACCAAGTGGTGCATC CGCATGTGGAAGTCGCTCGGCCTGGCCTACGACCTGAAGCAGTTCCGCGCCAACGAGATCGAGAAGGGCCGCGTG CAGCAGATGCAGAAGAAGCTCGACCAGAAGCGCGCCACCCTCGACTGGGGCACCCCCCTCGAGCAGCTCCCCGTC ATCAGCTGGGACGACTTCGTCGACGGCACCAAGAACGGCAAGGCTCTCATCGCCATTGCCGGCGTCATCCACGAC GTCACCGCCTTCATCAAGGACCACCCGGGCGGCAAGGCCCTCATCTCGTCGGCCATTGGCAAGGATGCCACGGCC ATCTTCAACGGCGGCGTCTACAACCACTCCAACGCCGCCCACAACCTGCTGTCCACGATGCGTGTCGGCGTTCTT CGCGGCGGCTGCGAGGTTGAGATCTGGAAGCGCGCCCAGTTCGAGAACAAGGACGTCACGTACATGAACGACTCG GCCGGCCAGCGCATCGTCCGCGCCGGCGCCCAGGCCACCAAGGTGATTCAGCCCGTGGCGAGCGCCGATGCTGCC TGA |
| Transcript | >Hirsu2|9269 ATGTCTGAAGCTTCCTCCTCGGCCGCCCAGGCCCAGGCCAAAGCCTTCCCGGACGGCACGACCGACTACAAGCCG CTGCGGTCCAGCAAGTTCGATCCCAGCAAGGTTCACATCGCCGACACGCCCATGACGTGGTCCAACTGGCACAAG CACGTCAACTGGCTGAACACGACGCTCATCATCTTCATCCCCATGATCGGCTTCATCTCCGCCTACTGGGTCCCT CTCCGCCTCTACACCGCCATCTTCGCCGTCATCTACTACTTCAACGCCGGCCTCGGCATCACAGCCGGATACCAC CGCCTCTGGGCACACACCTCGTACAAAGCCACCCTCCCCCTCAAGATCTACCTCGCCGCTGTCGGTGCTGGCGCC GTCGAAGGCTCCATCCGTTGGTGGTCAAGGGAGCACCGCGCCCACCACCGATACACCGACACCGAGAAGGACCCC TACTCCGTTCGCAAGGGCCTGCTCTACTCCCACATCGGCTGGATGGTCTTCAAGCAGAACCCTAAGCGCACCGGA CGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACCGCAACTACCTCAAGTCGGTCATC TTCATGGCCCTCGTCTTCCCCACCCTCTTCTGCGGCCTCCTGTGGAACGATTGGCTTGGCGGCTTCGTCTACGGC GGCATCCTCCGCATCTGCTTCGTCCAGCAGGCCACCTTCTGCGTCAACTCCCTGGCCCACTGGCTGGGTGACCAG CCCTTCGATGACCGCAACTCGCCTCGCGACCATGTCATCACGGCCCTCGTCACCCTCGGAGAGGGCTACCACAAC TTCCACCACGAGTTCCCCTCGGACTACCGCAACGCCATCGAGTGGTATCAGTACGACCCGACCAAGTGGTGCATC CGCATGTGGAAGTCGCTCGGCCTGGCCTACGACCTGAAGCAGTTCCGCGCCAACGAGATCGAGAAGGGCCGCGTG CAGCAGATGCAGAAGAAGCTCGACCAGAAGCGCGCCACCCTCGACTGGGGCACCCCCCTCGAGCAGCTCCCCGTC ATCAGCTGGGACGACTTCGTCGACGGCACCAAGAACGGCAAGGCTCTCATCGCCATTGCCGGCGTCATCCACGAC GTCACCGCCTTCATCAAGGACCACCCGGGCGGCAAGGCCCTCATCTCGTCGGCCATTGGCAAGGATGCCACGGCC ATCTTCAACGGCGGCGTCTACAACCACTCCAACGCCGCCCACAACCTGCTGTCCACGATGCGTGTCGGCGTTCTT CGCGGCGGCTGCGAGGTTGAGATCTGGAAGCGCGCCCAGTTCGAGAACAAGGACGTCACGTACATGAACGACTCG GCCGGCCAGCGCATCGTCCGCGCCGGCGCCCAGGCCACCAAGGTGATTCAGCCCGTGGCGAGCGCCGATGCTGCC TGA |
| Gene | >Hirsu2|9269 ATGTCTGAAGCTTCCTCCTCGGCCGCCCAGGCCCAGGCCAAAGCCTTCCCGGACGGCACGACCGACTACAAGCCG CTGCGGTCCAGCAAGTTCGATCCCAGCAAGGTTCACATCGCCGACACGCCCATGACGTGGTCCAACTGGCACAAG CACGTCAACTGGCTGAACACGACGCTCATCATCTTCATCCCCATGATCGGCTTCATCTCCGCCTACTGGGTCCCT CTCCGCCTCTACACCGCCATCTTCGCCGTCATCTACTACTTCAACGCCGGCCTCGGCATCACAGCCGGTGAGTTT TCCATTCTCCGTCTCAGTCCGTTCCGCGCCCCGTCGACTCGACTTGCCCCCGGTCAAGATGGACGAGTCCATGAG GCACGCGGGCTGCTTTCCTCATCAACCCATACACCTCATGCTGACCTGCGTCCCTTTCGCTTCCAGGATACCACC GCCTCTGGGCACACACCTCGTACAAAGCCACCCTCCCCCTCAAGATCTACCTCGCCGCTGTCGGTGCTGGCGCCG TCGAAGGCTCCATCCGTTGGTGGTCAAGGGAGCACCGCGCCCACCACCGATACACCGACACCGAGAAGGACCCCT ACTCCGTTCGCAAGGGCCTGCTCTACTCCCACATCGGCTGGATGGTCTTCAAGCAGAACCCTAAGCGCACCGGAC GCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACCGCAACTACCTCAAGTCGGTCATCT TCATGGCCCTCGTCTTCCCCACCCTCTTCTGCGGCCTCCTGTGGAACGATTGGCTTGGCGGCTTCGTCTACGGCG GCATCCTCCGCATCTGCTTCGTCCAGCAGGCCACCTTCTGCGTCAACTCCCTGGCCCACTGGCTGGGTGACCAGC CCTTCGATGACCGCAACTCGCCTCGCGACCATGTCATCACGGCCCTCGTCACCCTCGGAGAGGGCTACCACAACT TCCACCACGAGTTCCCCTCGGACTACCGCAACGCCATCGAGTGGTATCAGTACGACCCGACCAAGTGGTGCATCC GCATGTGGAAGTCGCTCGGCCTGGCCTACGACCTGAAGCAGTTCCGCGCCAACGAGATCGAGAAGGGCCGCGTGC AGCAGATGCAGAAGAAGCTCGACCAGAAGCGCGCCACCCTCGACTGGGGCACCCCCCTCGAGCAGCTCCCCGTCA TCAGCTGGGACGACTTCGTCGACGGCACCAAGAACGGCAAGGCTCTCATCGCCATTGCCGGCGTCATCCACGACG TCACCGCCTTCATCAAGGACCACCCGGGCGGCAAGGCCCTCATCTCGTCGGCCATTGGCAAGGATGCCACGGCCA TCTTCAACGGCGGCGTCTACAACCACTCCAACGCCGCCCACAACCTGCTGTCCACGATGCGTGTCGGCGTTCTTC GCGGCGGCTGCGAGGTTGAGATCTGGAAGCGCGCCCAGTTCGAGAACAAGGACGTCACGTACATGAACGACTCGG CCGGCCAGCGCATCGTCCGCGCCGGCGCCCAGGCCACCAAGGTGATTCAGCCCGTGGCGAGCGCCGATGCTGCCT GA |