© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9268 |
| Gene name | |
| Location | Contig_662:13723..14480 |
| Strand | + |
| Gene length (bp) | 757 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 4.4E-07 | 159 | 200 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59831|YCUB_SCHPO | Uncharacterized amino-acid permease C965.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.11c PE=3 SV=1 | 121 | 200 | 6.0E-12 |
| sp|P32487|LYP1_YEAST | Lysine-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYP1 PE=1 SV=2 | 135 | 200 | 5.0E-11 |
| sp|P24207|PHEP_ECOLI | Phenylalanine-specific permease OS=Escherichia coli (strain K12) GN=pheP PE=1 SV=1 | 147 | 199 | 6.0E-10 |
| sp|P53388|DIP5_YEAST | Dicarboxylic amino acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIP5 PE=1 SV=1 | 147 | 200 | 6.0E-09 |
| sp|P04817|CAN1_YEAST | Arginine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAN1 PE=1 SV=2 | 136 | 197 | 2.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59831|YCUB_SCHPO | Uncharacterized amino-acid permease C965.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.11c PE=3 SV=1 | 121 | 200 | 6.0E-12 |
| sp|P32487|LYP1_YEAST | Lysine-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYP1 PE=1 SV=2 | 135 | 200 | 5.0E-11 |
| sp|P24207|PHEP_ECOLI | Phenylalanine-specific permease OS=Escherichia coli (strain K12) GN=pheP PE=1 SV=1 | 147 | 199 | 6.0E-10 |
| sp|P53388|DIP5_YEAST | Dicarboxylic amino acid permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIP5 PE=1 SV=1 | 147 | 200 | 6.0E-09 |
| sp|P04817|CAN1_YEAST | Arginine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAN1 PE=1 SV=2 | 136 | 197 | 2.0E-08 |
| sp|P25737|LYSP_ECOLI | Lysine-specific permease OS=Escherichia coli (strain K12) GN=lysP PE=1 SV=5 | 151 | 200 | 4.0E-08 |
| sp|O34618|YTNA_BACSU | Uncharacterized amino acid permease YtnA OS=Bacillus subtilis (strain 168) GN=ytnA PE=3 SV=1 | 147 | 200 | 5.0E-08 |
| sp|Q8X968|AROP_ECO57 | Aromatic amino acid transport protein AroP OS=Escherichia coli O157:H7 GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|P39137|ROCE_BACSU | Amino-acid permease RocE OS=Bacillus subtilis (strain 168) GN=rocE PE=2 SV=1 | 149 | 200 | 2.0E-07 |
| sp|P15993|AROP_ECOLI | Aromatic amino acid transport protein AroP OS=Escherichia coli (strain K12) GN=aroP PE=1 SV=3 | 150 | 199 | 2.0E-07 |
| sp|P59737|AROP_SHIFL | Aromatic amino acid transport protein AroP OS=Shigella flexneri GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|Q8FL49|AROP_ECOL6 | Aromatic amino acid transport protein AroP OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|P0A188|AROP_SALTI | Aromatic amino acid transport protein AroP OS=Salmonella typhi GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|E1W822|AROP_SALTS | Aromatic amino acid transport protein AroP OS=Salmonella typhimurium (strain SL1344) GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|P0CK99|AROP_SALTY | Aromatic amino acid transport protein AroP OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=aroP PE=3 SV=1 | 150 | 199 | 2.0E-07 |
| sp|P96704|YDGF_BACSU | Uncharacterized transporter YdgF OS=Bacillus subtilis (strain 168) GN=ydgF PE=3 SV=1 | 136 | 199 | 3.0E-07 |
| sp|P38967|TAT2_YEAST | Tryptophan permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAT2 PE=1 SV=1 | 150 | 197 | 5.0E-07 |
| sp|O06005|AAPA_BACSU | Amino-acid permease AapA OS=Bacillus subtilis (strain 168) GN=aapA PE=3 SV=2 | 147 | 198 | 6.0E-07 |
| sp|P0AAE0|CYCA_ECOLI | D-serine/D-alanine/glycine transporter OS=Escherichia coli (strain K12) GN=cycA PE=1 SV=1 | 140 | 200 | 1.0E-06 |
| sp|P0AAE1|CYCA_ECO57 | D-serine/D-alanine/glycine transporter OS=Escherichia coli O157:H7 GN=cycA PE=3 SV=1 | 140 | 200 | 1.0E-06 |
| sp|P39636|ROCC_BACSU | Amino-acid permease RocC OS=Bacillus subtilis (strain 168) GN=rocC PE=2 SV=1 | 147 | 193 | 1.0E-06 |
| sp|Q876K6|AGP1_SACU7 | General amino acid permease AGP1 OS=Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 10550 / MCYC 623 / NCYC 2669 / NRRL Y-11845) GN=AGP1 PE=3 SV=1 | 95 | 200 | 1.0E-06 |
| sp|P19145|GAP1_YEAST | General amino-acid permease GAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAP1 PE=1 SV=2 | 139 | 200 | 2.0E-06 |
| sp|A6ZTG5|AGP1_YEAS7 | General amino acid permease AGP1 OS=Saccharomyces cerevisiae (strain YJM789) GN=AGP1 PE=3 SV=1 | 73 | 200 | 4.0E-06 |
| sp|P43548|AGP3_YEAST | General amino acid permease AGP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGP3 PE=1 SV=1 | 151 | 199 | 5.0E-06 |
| sp|Q9P5N2|AAT1_SCHPO | Amino acid transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aat1 PE=3 SV=1 | 151 | 200 | 8.0E-06 |
| sp|O60170|MEU22_SCHPO | Probable amino-acid permease meu22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=meu22 PE=2 SV=1 | 147 | 200 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 159 | 181 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9268 MRASGSAESASSGSRTLGLPSSPSRRAADRDEAIAAEAIEEAAAAADAEKRSADESAAMRGYGGTGITKKGLFDD SSDRGGRGGDGDVEVGVEGQQQQQRKRLRLLAFWSSPSSPRASSSAEETTAAAAAAAASSDGNSDEVVTAAEDRD LRRGLAERHVSMMGIAGAIGTGLFLGLGAAVRRAGPLGALLGYGTVGLVV* |
| Coding | >Hirsu2|9268 ATGAGGGCGAGCGGCTCGGCCGAGAGCGCCAGCTCGGGCTCCCGCACCCTCGGGCTTCCGTCGTCGCCGTCCCGC CGCGCCGCCGACCGAGACGAGGCCATCGCGGCGGAGGCAATCGAGGAGGCGGCAGCAGCAGCAGACGCGGAGAAG CGGTCGGCAGACGAGTCGGCGGCCATGCGCGGCTACGGCGGCACCGGCATCACCAAGAAGGGCCTGTTTGACGAT TCGTCGGACCGCGGCGGGCGGGGGGGCGACGGCGATGTCGAGGTCGGCGTCGAGGGACAGCAGCAGCAGCAGCGG AAACGGCTCCGGCTCCTGGCCTTCTGGTCCTCCCCCTCCTCGCCTCGCGCGTCCTCGTCGGCAGAAGAGACGACG GCGGCGGCGGCAGCAGCAGCAGCATCCAGCGACGGCAACTCGGACGAGGTGGTGACGGCGGCCGAGGACCGGGAC CTGCGGCGCGGGCTGGCGGAGCGGCACGTGTCGATGATGGGCATCGCCGGCGCCATCGGCACCGGCCTCTTCCTC GGGCTCGGGGCGGCGGTGCGGCGGGCGGGCCCGCTGGGCGCGCTGCTGGGCTACGGCACCGTCGGGCTGGTGGTC TGA |
| Transcript | >Hirsu2|9268 ATGAGGGCGAGCGGCTCGGCCGAGAGCGCCAGCTCGGGCTCCCGCACCCTCGGGCTTCCGTCGTCGCCGTCCCGC CGCGCCGCCGACCGAGACGAGGCCATCGCGGCGGAGGCAATCGAGGAGGCGGCAGCAGCAGCAGACGCGGAGAAG CGGTCGGCAGACGAGTCGGCGGCCATGCGCGGCTACGGCGGCACCGGCATCACCAAGAAGGGCCTGTTTGACGAT TCGTCGGACCGCGGCGGGCGGGGGGGCGACGGCGATGTCGAGGTCGGCGTCGAGGGACAGCAGCAGCAGCAGCGG AAACGGCTCCGGCTCCTGGCCTTCTGGTCCTCCCCCTCCTCGCCTCGCGCGTCCTCGTCGGCAGAAGAGACGACG GCGGCGGCGGCAGCAGCAGCAGCATCCAGCGACGGCAACTCGGACGAGGTGGTGACGGCGGCCGAGGACCGGGAC CTGCGGCGCGGGCTGGCGGAGCGGCACGTGTCGATGATGGGCATCGCCGGCGCCATCGGCACCGGCCTCTTCCTC GGGCTCGGGGCGGCGGTGCGGCGGGCGGGCCCGCTGGGCGCGCTGCTGGGCTACGGCACCGTCGGGCTGGTGGTC TGA |
| Gene | >Hirsu2|9268 ATGAGGGCGAGCGGCTCGGCCGAGAGCGCCAGCTCGGGCTCCCGCACCCTCGGGCTTCCGTCGTCGCCGTCCCGC CGCGCCGCCGACCGAGACGAGGCCATCGCGGCGGAGGCAATCGAGGAGGCGGCAGCAGCAGCAGACGCGGAGAAG CGGTCGGCAGACGAGTCGGCGGCCATGCGCGGCTACGGCGGCACCGGCATCACCAAGAAGGGCCTGTTTGACGAT TCGTCGGACCGCGGCGGGCGGGGGGGCGACGGCGATGTCGAGGTCGGCGTCGAGGGACAGCAGCAGCAGCAGCGG AAACGGCTCCGGCTCCTGGCCTTCTGGTCCTCCCCCTCCTCGCCTCGCGCGTCCTCGTCGGCAGAAGAGACGACG GCGGCGGCGGCAGCAGCAGCAGCATCCAGCGACGGCAACTCGGACGAGGTGGTGACGGCGGCCGAGGACCGGGAC CTGCGGCGCGGGCTGGCGGAGCGGCACGTGTCGATGATGGGCATCGCCGGCGCCATCGGCACCGGCCTCTTCCTC GGGCTCGGGGCGGCGGTGCGGCGGGCGGGCCCGCTGGGCGCGCTGCTGGGCTACGGCACCGTCGGGCTGGTGGTG TGCGCGGTGCAGCTGGCGCTGGGCGAGGCGGCGGCGCTGCTGCCCGTCACCGGCGGCTTCGTCCGGCACGCGGAC CTGCTGGTGGACCCGGCCTGGGGCTTCGCCGTCGGCTGGAACCTGGTGTACGGCAACGCGCTGTCGATCCCGTCC GAGCTGA |