Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|923
Gene name
LocationContig_1192:868..2669
Strand-
Gene length (bp)1801
Transcript length (bp)1380
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03663 Glyco_hydro_76 Glycosyl hydrolase family 76 4.2E-150 33 403

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P36091|DCW1_YEAST Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 24 455 9.0E-118
sp|Q75DG6|DCW1_ASHGO Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 25 457 5.0E-115
sp|Q05031|DFG5_YEAST Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 7 455 1.0E-111
sp|Q6FLP9|DCW1_CANGA Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 5 416 8.0E-111
sp|O74556|YCZ2_SCHPO Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 6 416 5.0E-100
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Swissprot ID Swissprot Description Start End E-value
sp|P36091|DCW1_YEAST Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 24 455 9.0E-118
sp|Q75DG6|DCW1_ASHGO Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 25 457 5.0E-115
sp|Q05031|DFG5_YEAST Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 7 455 1.0E-111
sp|Q6FLP9|DCW1_CANGA Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 5 416 8.0E-111
sp|O74556|YCZ2_SCHPO Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 6 416 5.0E-100
sp|Q5ACZ2|DFG5_CANAL Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 16 455 1.0E-99
sp|Q9P6I3|YHG7_SCHPO Putative mannan endo-1,6-alpha-mannosidase C1198.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.07c PE=3 SV=2 27 442 6.0E-97
sp|Q5AD78|DCW1_CANAL Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 29 457 2.0E-96
sp|Q9P6I4|YHG6_SCHPO Putative mannan endo-1,6-alpha-mannosidase C1198.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.06c PE=3 SV=1 6 412 8.0E-80
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 435 457 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|923
MKSSSSLGALLSAAGLVAAQGSSQFSIESEDAIKQTASTLAWDMLQYYKGNQSGQTPGILPGPPPAGDYYWWEGG
AMWGTLIDYWAWTGDSTYNNEIMDAMQWQVGVNKDYMPHNVTASLGNDDQGFWGMSAMLAAENKFPDPPSDKPQW
LALAQAVFNTQASPDRHDSTCGGGLRWQIPFANNGYNYKNSIANGCFFNLGARLARYTGNATYSDWAIRTWDWMV
QIGFIDNATYAIYDGANINTECRDINKAQFSYNNGVFAQGAAFMYNHTNGDALWKDRTQKLVERGLKTFFPNGIA
TEPSCEGINTCTTDMITFKGFVHRWYSVIMQVAPFTADTIKPVLRKSAEAAIKQCTGGALGRQCGFKWATGTYDG
KTGAGQEMSVLGAVASQLIGTAKAPVTHNSGGTSEGNPDAGGSGDDFQKHNRPITAGDKAGASILTLLVLGSACG
VFGWMSLGV*
Coding >Hirsu2|923
ATGAAGTCGTCCTCGTCGCTGGGGGCGCTGCTCTCGGCCGCCGGCCTCGTCGCGGCCCAGGGCTCTTCCCAGTTC
TCCATCGAGTCCGAAGACGCCATCAAACAGACGGCCAGCACCCTCGCCTGGGACATGCTGCAGTACTACAAGGGC
AACCAGTCGGGCCAGACGCCCGGCATCCTGCCCGGCCCGCCCCCCGCCGGCGACTACTACTGGTGGGAGGGCGGA
GCCATGTGGGGGACGCTGATCGACTACTGGGCCTGGACGGGCGACTCGACCTACAACAACGAGATCATGGACGCC
ATGCAGTGGCAGGTGGGCGTCAACAAGGACTACATGCCGCACAACGTCACCGCCTCGCTCGGCAACGACGACCAG
GGCTTCTGGGGCATGTCGGCCATGCTGGCCGCCGAGAACAAGTTCCCCGACCCGCCCTCGGACAAGCCGCAGTGG
CTGGCCCTGGCCCAGGCCGTCTTCAACACCCAGGCGAGCCCGGACCGCCACGACTCCACCTGCGGCGGCGGCCTG
CGCTGGCAGATTCCCTTTGCCAACAACGGCTACAACTACAAGAACAGCATCGCCAACGGCTGCTTCTTCAACCTC
GGCGCGCGGCTGGCCCGCTACACCGGCAACGCCACCTACTCCGACTGGGCCATCCGCACCTGGGACTGGATGGTC
CAGATCGGCTTCATCGACAACGCCACCTACGCCATCTACGACGGCGCCAACATCAACACCGAATGCAGAGATATC
AACAAGGCCCAGTTCTCGTACAACAACGGCGTCTTTGCCCAGGGCGCCGCCTTCATGTACAACCACACCAACGGA
GACGCGCTGTGGAAGGACAGGACGCAGAAGCTGGTCGAGCGCGGGCTCAAGACCTTCTTCCCCAACGGCATCGCG
ACGGAGCCGTCGTGCGAGGGCATCAACACGTGCACGACGGACATGATCACCTTCAAGGGCTTCGTGCACCGCTGG
TATTCGGTCATCATGCAGGTGGCACCCTTCACGGCCGACACGATCAAGCCGGTGCTGCGCAAGTCGGCCGAGGCG
GCCATCAAGCAGTGCACGGGCGGGGCGCTGGGCCGACAGTGCGGCTTCAAGTGGGCCACGGGCACGTACGACGGC
AAGACGGGGGCCGGGCAGGAGATGAGCGTGCTGGGCGCGGTGGCGTCGCAGCTGATCGGCACCGCCAAGGCGCCC
GTCACGCACAACTCGGGCGGCACGTCGGAGGGCAACCCGGACGCGGGTGGCAGCGGCGACGACTTCCAGAAGCAC
AACCGGCCCATCACGGCCGGCGACAAGGCGGGCGCCAGCATCCTGACGCTGCTGGTTCTGGGCTCGGCCTGCGGC
GTCTTTGGCTGGATGAGCCTGGGCGTGTAA
Transcript >Hirsu2|923
ATGAAGTCGTCCTCGTCGCTGGGGGCGCTGCTCTCGGCCGCCGGCCTCGTCGCGGCCCAGGGCTCTTCCCAGTTC
TCCATCGAGTCCGAAGACGCCATCAAACAGACGGCCAGCACCCTCGCCTGGGACATGCTGCAGTACTACAAGGGC
AACCAGTCGGGCCAGACGCCCGGCATCCTGCCCGGCCCGCCCCCCGCCGGCGACTACTACTGGTGGGAGGGCGGA
GCCATGTGGGGGACGCTGATCGACTACTGGGCCTGGACGGGCGACTCGACCTACAACAACGAGATCATGGACGCC
ATGCAGTGGCAGGTGGGCGTCAACAAGGACTACATGCCGCACAACGTCACCGCCTCGCTCGGCAACGACGACCAG
GGCTTCTGGGGCATGTCGGCCATGCTGGCCGCCGAGAACAAGTTCCCCGACCCGCCCTCGGACAAGCCGCAGTGG
CTGGCCCTGGCCCAGGCCGTCTTCAACACCCAGGCGAGCCCGGACCGCCACGACTCCACCTGCGGCGGCGGCCTG
CGCTGGCAGATTCCCTTTGCCAACAACGGCTACAACTACAAGAACAGCATCGCCAACGGCTGCTTCTTCAACCTC
GGCGCGCGGCTGGCCCGCTACACCGGCAACGCCACCTACTCCGACTGGGCCATCCGCACCTGGGACTGGATGGTC
CAGATCGGCTTCATCGACAACGCCACCTACGCCATCTACGACGGCGCCAACATCAACACCGAATGCAGAGATATC
AACAAGGCCCAGTTCTCGTACAACAACGGCGTCTTTGCCCAGGGCGCCGCCTTCATGTACAACCACACCAACGGA
GACGCGCTGTGGAAGGACAGGACGCAGAAGCTGGTCGAGCGCGGGCTCAAGACCTTCTTCCCCAACGGCATCGCG
ACGGAGCCGTCGTGCGAGGGCATCAACACGTGCACGACGGACATGATCACCTTCAAGGGCTTCGTGCACCGCTGG
TATTCGGTCATCATGCAGGTGGCACCCTTCACGGCCGACACGATCAAGCCGGTGCTGCGCAAGTCGGCCGAGGCG
GCCATCAAGCAGTGCACGGGCGGGGCGCTGGGCCGACAGTGCGGCTTCAAGTGGGCCACGGGCACGTACGACGGC
AAGACGGGGGCCGGGCAGGAGATGAGCGTGCTGGGCGCGGTGGCGTCGCAGCTGATCGGCACCGCCAAGGCGCCC
GTCACGCACAACTCGGGCGGCACGTCGGAGGGCAACCCGGACGCGGGTGGCAGCGGCGACGACTTCCAGAAGCAC
AACCGGCCCATCACGGCCGGCGACAAGGCGGGCGCCAGCATCCTGACGCTGCTGGTTCTGGGCTCGGCCTGCGGC
GTCTTTGGCTGGATGAGCCTGGGCGTGTAA
Gene >Hirsu2|923
ATGAAGTCGTCCTCGTCGCTGGGGGCGCTGCTCTCGGCCGCCGGCCTCGTCGCGGCCCAGGGCTCTTCCCAGTTC
TCCATCGAGTCCGAAGGTGCGTGCGCCGGCCGTCAAATGGCACACACAGGCCCCCTCCCCTCCCCTCCCCTCCCT
CGCCCTCTCGCCTGCCGGCACACGGCCAGCTGTCCTCTGCGGTCGACGACGTCTGACGCTTGCCCCCGCCCGCAG
ACGCCATCAAACAGACGGCCAGCACCCTCGCCTGGGACATGCTGCAGTACTACAAGGGCAACCAGTCGGGCCAGA
CGCCCGGCATCCTGCCCGGCCCGCCCCCCGCCGGCGACTACTACTGGTGGGAGGGCGGAGCCATGTGGGGGACGC
TGATCGACTACTGGGCCTGGACGGGCGACTCGACCTACAACAACGAGATCATGGACGCCATGCAGTGGCAGGTGG
GCGTCAACAAGGACTACATGCCGCACAACGTCACCGCCTCGCTCGGCAACGACGACCAGGGCTTCTGGGGCATGT
CGGCCATGCTGGCCGCCGAGAACAAGTTCCCCGACCCGCCCTCGGACAAGCCGCAGTGGCTGGCCCTGGCCCAGG
CCGTCTTCAACACCCAGGCGAGCCCGGACCGCCACGACTCCACCTGCGGCGGCGGCCTGCGCTGGCAGATTCCCT
TTGCCAACAACGGCTACAACTACAAGAACAGTAAGTGTGCGAGGGAGGGAGAGACCGGAGGGGAGACTGAGAGAG
AGAGAGACGGAGAGAGAGAGAGACGGAGAGAGAAAGAGACTGAGGGAGACTGAAAGAGAGAGAAAAAGACCGAGA
GAGAGAGAGACTGAAAGTGAGTGAAAAAAGAGAGACTGACACACACTCACACAGGCATCGCCAACGGCTGCTTCT
TCAACCTCGGCGCGCGGCTGGCCCGCTACACCGGCAACGCCACCTACTCCGACTGGGCCATCCGCACCTGGGACT
GGATGGTCCAGATCGGCTTCATCGACAACGCCACCTACGCCATCTACGACGGCGCCAACATCAACACCGAATGCA
GAGATATCAACAAGGCCCAGTTCTCGTACAACAACGGCGTCTTTGCCCAGGGCGCCGCCTTCATGTACAACCACG
TACGTCCGAACCCTTGTTTGTCCCGCTCCCCCCGTCTCTCTCTCTGCTGCGCCGACACTCGTCGCCCACGTTCCG
AGTCGTGTGTGGCCCGCCGCTGACGTCCGTCGTCCAGACCAACGGAGACGCGCTGTGGAAGGACAGGACGCAGAA
GCTGGTCGAGCGCGGGCTCAAGACCTTCTTCCCCAACGGCATCGCGACGGAGCCGTCGTGCGAGGGCATCAACAC
GTGCACGACGGACATGATCACCTTCAAGGGCTTCGTGCACCGCTGGTATTCGGTCATCATGCAGGTGGCACCCTT
CACGGCCGACACGATCAAGCCGGTGCTGCGCAAGTCGGCCGAGGCGGCCATCAAGCAGTGCACGGGCGGGGCGCT
GGGCCGACAGTGCGGCTTCAAGTGGGCCACGGGCACGTACGACGGCAAGACGGGGGCCGGGCAGGAGATGAGCGT
GCTGGGCGCGGTGGCGTCGCAGCTGATCGGCACCGCCAAGGCGCCCGTCACGCACAACTCGGGCGGCACGTCGGA
GGGCAACCCGGACGCGGGTGGCAGCGGCGACGACTTCCAGAAGCACAACCGGCCCATCACGGCCGGCGACAAGGC
GGGCGCCAGCATCCTGACGCTGCTGGTTCTGGGCTCGGCCTGCGGCGTCTTTGGCTGGATGAGCCTGGGCGTGTA
A

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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