© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9227 |
| Gene name | |
| Location | Contig_658:6504..8109 |
| Strand | - |
| Gene length (bp) | 1605 |
| Transcript length (bp) | 1434 |
| Coding sequence length (bp) | 1434 |
| Protein length (aa) | 478 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10104 | Brr6_like_C_C | Di-sulfide bridge nucleocytoplasmic transport domain | 1.2E-37 | 252 | 378 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53062|BRR6_YEAST | Nucleus export protein BRR6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRR6 PE=1 SV=1 | 246 | 360 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0031965 | nuclear membrane | Yes |
| GO:0055088 | lipid homeostasis | Yes |
| GO:0042592 | homeostatic process | No |
| GO:0065008 | regulation of biological quality | No |
| GO:0048878 | chemical homeostasis | No |
| GO:0005575 | cellular_component | No |
| GO:0065007 | biological regulation | No |
| GO:0031090 | organelle membrane | No |
| GO:0008150 | biological_process | No |
| GO:0016020 | membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 253 | 275 | 22 |
| 2 | 359 | 378 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9227 MGSRSFEGPMDWEYQDRGPFDPTSPFAQAAKNAQRNMFGTPAKSPSRPSNPFAHLAATPSRPQLAPPQTSRFTPQ LSSKNTAPPFRNPAFTTPRRPIDEMVLSEASGAEDSPALTETSDYPNDTPETEHRTDRVVGGTVTPLKIDKSSRY GKSGLLSKKHVSGRGEIQGRRDPSVGLRKRKRHNYDRDVGRQYHAQDSEAWDSDSDDADSRADSRSSTRSKKNDK QGQLQGPFESFFHALNKYPNTPDHMQRWMQFGANLFLVSVLAYLGWSVVSTVRSDIHKANDMARQELMSRMTECQ TQYTMNECAKKDRPALRTMCEEWYDCMMQNPESILRVKVTAKQVAEIINEFSETMHLKAWGIVLGFILVCTTVNV GAFNRQGTHKPSLPSAPAQASEAAAAAAARSPGIGAGYMLVPVQTPRMPRRAMLDEGTDTDTSPLNLKPAPSLLT PSGRRSPTKLERQLSPVKYGRGSNRGP* |
| Coding | >Hirsu2|9227 ATGGGGTCCCGAAGCTTCGAAGGTCCCATGGACTGGGAATACCAGGACCGAGGCCCGTTCGATCCAACTAGCCCC TTCGCCCAGGCTGCAAAGAACGCTCAGCGAAACATGTTCGGGACGCCGGCCAAGTCTCCCTCTCGTCCAAGCAAC CCATTTGCCCACCTCGCAGCAACGCCGTCGAGACCTCAACTTGCGCCCCCCCAGACGTCGCGCTTCACCCCCCAG CTGTCCTCCAAGAACACGGCGCCTCCGTTCAGGAATCCCGCGTTCACGACGCCAAGGCGACCGATCGATGAGATG GTGTTGTCCGAGGCATCGGGCGCCGAGGATAGCCCCGCGCTGACGGAAACGTCCGACTACCCCAACGACACCCCC GAGACCGAGCATAGGACGGACAGGGTAGTCGGGGGCACCGTCACGCCGCTGAAGATTGACAAGTCGAGTCGGTAC GGGAAGTCGGGGCTCCTCTCGAAGAAGCACGTGTCGGGTAGGGGGGAGATACAGGGGCGCAGAGATCCGTCGGTC GGCTTGCGGAAGAGGAAACGGCACAACTACGACCGAGACGTCGGCCGCCAATATCACGCCCAAGACAGCGAGGCC TGGGATTCGGACTCGGACGACGCGGACAGCCGGGCCGACTCTCGCAGCTCGACGCGGTCGAAGAAGAACGACAAG CAGGGCCAGCTCCAGGGCCCTTTCGAGTCGTTCTTCCACGCGCTCAACAAGTACCCCAACACGCCGGATCATATG CAGCGGTGGATGCAGTTTGGGGCCAACCTCTTCCTCGTCTCGGTGCTGGCCTATCTGGGCTGGTCCGTCGTCAGC ACCGTGCGCAGCGACATCCACAAGGCCAACGACATGGCGCGGCAGGAGCTCATGAGCAGGATGACGGAGTGCCAG ACGCAGTACACGATGAACGAGTGCGCGAAAAAGGACCGGCCGGCGTTGAGGACGATGTGTGAGGAGTGGTACGAC TGCATGATGCAGAACCCGGAGTCGATCTTGAGGGTCAAAGTCACCGCCAAGCAGGTGGCCGAGATTATCAACGAG TTTTCCGAGACGATGCACCTCAAGGCCTGGGGCATCGTGCTCGGTTTCATCTTAGTATGCACGACGGTCAATGTA GGGGCGTTCAACCGGCAAGGGACACACAAGCCCTCGCTGCCGTCGGCACCGGCGCAGGCCAGCGAGGCGGCGGCG GCAGCGGCGGCAAGATCGCCAGGCATCGGCGCGGGCTACATGCTGGTGCCGGTGCAAACGCCGAGGATGCCCCGG CGGGCGATGCTGGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTAAAGCCGGCACCGTCGCTCTTGACG CCCTCGGGACGCAGGAGCCCGACCAAGCTGGAGAGGCAGCTGAGTCCCGTGAAATACGGTCGGGGCTCGAACCGG GGGCCGTGA |
| Transcript | >Hirsu2|9227 ATGGGGTCCCGAAGCTTCGAAGGTCCCATGGACTGGGAATACCAGGACCGAGGCCCGTTCGATCCAACTAGCCCC TTCGCCCAGGCTGCAAAGAACGCTCAGCGAAACATGTTCGGGACGCCGGCCAAGTCTCCCTCTCGTCCAAGCAAC CCATTTGCCCACCTCGCAGCAACGCCGTCGAGACCTCAACTTGCGCCCCCCCAGACGTCGCGCTTCACCCCCCAG CTGTCCTCCAAGAACACGGCGCCTCCGTTCAGGAATCCCGCGTTCACGACGCCAAGGCGACCGATCGATGAGATG GTGTTGTCCGAGGCATCGGGCGCCGAGGATAGCCCCGCGCTGACGGAAACGTCCGACTACCCCAACGACACCCCC GAGACCGAGCATAGGACGGACAGGGTAGTCGGGGGCACCGTCACGCCGCTGAAGATTGACAAGTCGAGTCGGTAC GGGAAGTCGGGGCTCCTCTCGAAGAAGCACGTGTCGGGTAGGGGGGAGATACAGGGGCGCAGAGATCCGTCGGTC GGCTTGCGGAAGAGGAAACGGCACAACTACGACCGAGACGTCGGCCGCCAATATCACGCCCAAGACAGCGAGGCC TGGGATTCGGACTCGGACGACGCGGACAGCCGGGCCGACTCTCGCAGCTCGACGCGGTCGAAGAAGAACGACAAG CAGGGCCAGCTCCAGGGCCCTTTCGAGTCGTTCTTCCACGCGCTCAACAAGTACCCCAACACGCCGGATCATATG CAGCGGTGGATGCAGTTTGGGGCCAACCTCTTCCTCGTCTCGGTGCTGGCCTATCTGGGCTGGTCCGTCGTCAGC ACCGTGCGCAGCGACATCCACAAGGCCAACGACATGGCGCGGCAGGAGCTCATGAGCAGGATGACGGAGTGCCAG ACGCAGTACACGATGAACGAGTGCGCGAAAAAGGACCGGCCGGCGTTGAGGACGATGTGTGAGGAGTGGTACGAC TGCATGATGCAGAACCCGGAGTCGATCTTGAGGGTCAAAGTCACCGCCAAGCAGGTGGCCGAGATTATCAACGAG TTTTCCGAGACGATGCACCTCAAGGCCTGGGGCATCGTGCTCGGTTTCATCTTAGTATGCACGACGGTCAATGTA GGGGCGTTCAACCGGCAAGGGACACACAAGCCCTCGCTGCCGTCGGCACCGGCGCAGGCCAGCGAGGCGGCGGCG GCAGCGGCGGCAAGATCGCCAGGCATCGGCGCGGGCTACATGCTGGTGCCGGTGCAAACGCCGAGGATGCCCCGG CGGGCGATGCTGGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTAAAGCCGGCACCGTCGCTCTTGACG CCCTCGGGACGCAGGAGCCCGACCAAGCTGGAGAGGCAGCTGAGTCCCGTGAAATACGGTCGGGGCTCGAACCGG GGGCCGTGA |
| Gene | >Hirsu2|9227 ATGGGGTCCCGAAGCTTCGAAGGTCCCATGGACTGGGAATACCAGGACCGAGGCCCGTTCGATCCAACTAGCCCC TTCGCCCAGGCTGCAAAGAACGCTCAGCGAAACAGTGAGCCACCTTTGCGCGCGGGCCATGGGCCCATGGCGACC TCTTCCCGCACTGGGAATGATTTGGCAAACAGCTGACTGACGTTACTCGGCAGTGTTCGGGACGCCGGCCAAGTC TCCCTCTCGTCCAAGCAACCCATTTGCCCACCTCGCAGCAACGCCGTCGAGACCTCAACTTGCGCCCCCCCAGAC GTCGCGCTTCACCCCCCAGCTGTCCTCCAAGAACACGGCGCCTCCGTTCAGGAATCCCGCGTTCACGACGCCAAG GCGACCGATCGATGAGATGGTGTTGTCCGAGGCATCGGGCGCCGAGGATAGCCCCGCGCTGACGGAAACGTCCGA CTACCCCAACGACACCCCCGAGACCGAGCATAGGACGGACAGGGTAGTCGGGGGCACCGTCACGCCGCTGAAGAT TGACAAGTCGAGTCGGTACGGGAAGTCGGGGCTCCTCTCGAAGAAGCACGTGTCGGGTAGGGGGGAGATACAGGG GCGCAGAGATCCGTCGGTCGGCTTGCGGAAGAGGAAACGGCACAACTACGACCGAGACGTCGGCCGCCAATATCA CGCCCAAGACAGCGAGGCCTGGGATTCGGACTCGGACGACGCGGACAGCCGGGCCGACTCTCGCAGCTCGACGCG GTCGAAGAAGAACGACAAGCAGGGCCAGCTCCAGGGCCCTTTCGAGTCGTTCTTCCACGCGCTCAACAAGTACCC CAACACGCCGGATCATATGCAGCGGTGGATGCAGTTTGGGGCCAACCTCTTCCTCGTCTCGGTGCTGGCCTATCT GGGCTGGTCCGTCGTCAGCACCGTGCGCAGCGACATCCACAAGGCCAACGACATGGCGCGGCAGGAGCTCATGAG CAGGATGACGGAGTGCCAGACGCAGTACACGATGAACGAGTGCGCGAAAAAGGACCGGCCGGCGTTGAGGACGAT GTGTGAGGAGTGGTACGACTGCATGATGCAGAACCCGGAGTCGATCTTGAGGGTCAAAGTCACCGCCAAGCAGGT GGCCGAGATTATCAACGAGTTTTCCGAGACGATGCACCTCAAGGCCTGGGTAAGTCTGTCCTTGCCCCCGCTCCC CCCTGTCCTTCTCTCGGGGGCTGTGCCGGAGTAACCAACGCCGCGTTCCAGGGCATCGTGCTCGGTTTCATCTTA GTATGCACGACGGTCAATGTAGGGGCGTTCAACCGGCAAGGGACACACAAGCCCTCGCTGCCGTCGGCACCGGCG CAGGCCAGCGAGGCGGCGGCGGCAGCGGCGGCAAGATCGCCAGGCATCGGCGCGGGCTACATGCTGGTGCCGGTG CAAACGCCGAGGATGCCCCGGCGGGCGATGCTGGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTAAAG CCGGCACCGTCGCTCTTGACGCCCTCGGGACGCAGGAGCCCGACCAAGCTGGAGAGGCAGCTGAGTCCCGTGAAA TACGGTCGGGGCTCGAACCGGGGGCCGTGA |