Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Hirsu2|9214
Gene name
Location	Contig_656:2009..4534
Strand	-
Gene length (bp)	2525
Transcript length (bp)	2256
Coding sequence length (bp)	2256
Protein length (aa)	752

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01480	PWI	PWI domain	3.1E-12	677	743

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q8WZK0|US107_SCHPO	U1 snRNP-associated protein usp107 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp107 PE=1 SV=1	133	738	4.0E-22
sp|P49756|RBM25_HUMAN	RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3	580	749	3.0E-19
sp|B2RY56|RBM25_MOUSE	RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1 SV=2	580	749	4.0E-19

GO

GO Term	Description	Terminal node
GO:0006397	mRNA processing	Yes
GO:0046483	heterocycle metabolic process	No
GO:0044238	primary metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0008152	metabolic process	No
GO:0006396	RNA processing	No
GO:0043170	macromolecule metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0008150	biological_process	No
GO:0016071	mRNA metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0009987	cellular process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 29	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2|9214 MSYNQYGGNPYGAPPGYGGYGNLPPGMGAPPPGLGPPPGMPSAPGMAAPPGVPQPTTQQANRPAGLPPSFQPPAN MPNINFNAPVIRLGTGTPGGSGGRGEGPSAPPSGRSGMGMERGGDAGRERAREAPQILVPATADEKLRTIVIYNL TEGLGGDDGVQKICSAVGRLRKWECSAGIWAEHKPRLGLALFDDHDSVTIALKLLREQALEVPVKRQQATANPAQ DDAFEGIEKTELKVAVDEATMEYQASLSEARGAEDAELQGRLESARAALKQVQLELFYPPLGSRADADADAGANA NDGQGNVEVVNISIAQEDELADIPAEMREIVAKEIAAFRDRSNQRDMERLRREEEIGARFRQQNGASSGPSLGGG ANNIPLGPRAATMASTASGPKGQNGADRSVSFVNGGAGDADHAAHEGGNGTDASDDELYRRRLAKKEDEEHKIFG EMERKWLNRERSRQLALDREQERERQEEEQKQRRKDEQRDREMGWDDELETSRKTHPYYRDHASWARKRAVERQE EEMRDEMERRDEDDERRREQAQLERARGQADSFLDRQDREAERRQAASAPAPQPFKLSLGAAAQRAQASRAMPQR RTIAEVEGLLDDEDAEPSVRRQLVPIQMDAVTGPGAMSEEEISQAVRALAQEIPSDKDGLWAWEVKWDYMDESII GDRLRPFVEKKIVEYLGVQEEMLVATVEEHLRKHGTAAGLVEELEGPLDDEAEDLVKKLWRMVIFFTECEKRNLP T*
Coding	>Hirsu2|9214 ATGTCCTACAACCAGTACGGGGGAAATCCCTACGGCGCGCCGCCTGGCTACGGCGGCTATGGCAACCTGCCACCC GGCATGGGTGCTCCCCCTCCCGGCCTAGGCCCCCCTCCCGGCATGCCATCCGCCCCCGGCATGGCCGCTCCCCCG GGGGTCCCCCAGCCGACGACGCAGCAAGCGAACCGTCCCGCGGGGCTGCCCCCCAGCTTCCAGCCTCCGGCAAAC ATGCCCAACATCAACTTTAACGCCCCGGTCATTCGACTCGGCACCGGCACCCCCGGCGGCTCGGGCGGGCGAGGC GAAGGTCCTTCGGCGCCGCCTAGCGGGCGGTCCGGCATGGGCATGGAGAGAGGCGGCGACGCGGGCCGAGAGCGC GCCCGAGAGGCCCCTCAGATTCTCGTGCCCGCCACGGCCGACGAGAAGCTCCGCACGATCGTCATCTACAACCTC ACCGAGGGACTTGGCGGTGACGACGGCGTGCAGAAGATCTGCAGCGCGGTCGGACGCCTCCGAAAGTGGGAATGC TCGGCGGGCATCTGGGCGGAGCACAAGCCGCGGCTGGGCCTCGCCCTCTTCGACGATCACGACTCCGTCACGATT GCCCTGAAACTTCTCCGAGAGCAGGCCCTGGAGGTTCCCGTCAAGCGACAGCAGGCGACGGCCAATCCCGCCCAG GACGACGCGTTCGAAGGCATCGAGAAAACAGAGCTGAAGGTGGCAGTCGACGAGGCAACGATGGAGTACCAGGCG TCGCTCAGCGAGGCCAGAGGAGCAGAGGACGCCGAGCTCCAGGGCAGGCTTGAGTCGGCCCGTGCGGCGCTGAAG CAGGTTCAGCTCGAGCTCTTCTACCCCCCGCTCGGCAGCCGAGCCGACGCCGACGCCGACGCGGGCGCCAACGCG AACGACGGCCAGGGCAACGTCGAGGTGGTGAATATCTCCATTGCGCAGGAGGACGAGCTTGCTGACATCCCGGCC GAAATGCGGGAGATTGTGGCCAAGGAGATTGCCGCGTTCCGCGACCGGAGCAACCAGCGCGACATGGAACGCCTT AGGAGGGAGGAGGAAATCGGCGCGCGGTTCCGGCAGCAGAACGGGGCGTCGTCCGGGCCGTCACTGGGAGGAGGA GCAAACAACATTCCGCTGGGCCCGCGGGCAGCGACGATGGCATCGACCGCCTCCGGACCCAAGGGCCAGAACGGG GCCGATCGCAGCGTGTCCTTTGTGAACGGCGGAGCGGGCGATGCAGACCACGCGGCCCACGAGGGGGGCAACGGC ACGGACGCTAGCGACGACGAGCTGTACCGCCGAAGGCTGGCGAAGAAGGAGGACGAGGAGCACAAGATCTTCGGA GAAATGGAGCGCAAGTGGCTGAACCGAGAGCGCTCGAGACAGCTGGCGTTGGACCGCGAGCAGGAGCGCGAGCGG CAGGAAGAGGAGCAGAAGCAGAGACGCAAGGACGAACAGCGCGACCGCGAGATGGGCTGGGACGACGAGCTGGAG ACGAGTCGTAAGACGCACCCGTACTACCGCGACCACGCCTCGTGGGCGAGAAAGCGCGCGGTGGAGCGGCAGGAG GAGGAGATGAGAGACGAGATGGAGCGGCGGGACGAGGACGACGAGCGACGACGCGAGCAGGCGCAGCTGGAGCGA GCACGGGGCCAGGCCGACTCGTTCCTGGACCGGCAGGACCGCGAGGCGGAGCGGCGGCAGGCGGCGTCGGCGCCG GCGCCGCAGCCGTTCAAGCTGTCGCTGGGCGCCGCGGCGCAGCGGGCGCAGGCGTCGCGGGCGATGCCGCAGCGG CGGACGATCGCCGAGGTCGAGGGCCTGCTGGACGACGAGGATGCGGAGCCGTCGGTGCGGCGGCAGCTGGTGCCG ATCCAGATGGACGCCGTCACGGGCCCCGGGGCCATGTCGGAGGAGGAGATATCCCAGGCGGTGCGGGCGCTGGCG CAGGAGATCCCGTCGGACAAGGACGGCCTCTGGGCCTGGGAGGTCAAGTGGGACTACATGGACGAGAGCATCATC GGCGACCGGCTGCGGCCCTTCGTCGAGAAGAAGATCGTCGAGTACCTGGGCGTGCAGGAGGAGATGCTGGTGGCG ACGGTCGAGGAGCACCTCCGCAAGCACGGAACGGCCGCCGGCCTGGTCGAGGAACTGGAAGGGCCCCTGGACGAC GAGGCAGAGGACCTTGTCAAGAAACTCTGGCGCATGGTCATCTTCTTCACCGAGTGCGAGAAGCGCAACTTGCCG ACCTAG
Transcript	>Hirsu2|9214 ATGTCCTACAACCAGTACGGGGGAAATCCCTACGGCGCGCCGCCTGGCTACGGCGGCTATGGCAACCTGCCACCC GGCATGGGTGCTCCCCCTCCCGGCCTAGGCCCCCCTCCCGGCATGCCATCCGCCCCCGGCATGGCCGCTCCCCCG GGGGTCCCCCAGCCGACGACGCAGCAAGCGAACCGTCCCGCGGGGCTGCCCCCCAGCTTCCAGCCTCCGGCAAAC ATGCCCAACATCAACTTTAACGCCCCGGTCATTCGACTCGGCACCGGCACCCCCGGCGGCTCGGGCGGGCGAGGC GAAGGTCCTTCGGCGCCGCCTAGCGGGCGGTCCGGCATGGGCATGGAGAGAGGCGGCGACGCGGGCCGAGAGCGC GCCCGAGAGGCCCCTCAGATTCTCGTGCCCGCCACGGCCGACGAGAAGCTCCGCACGATCGTCATCTACAACCTC ACCGAGGGACTTGGCGGTGACGACGGCGTGCAGAAGATCTGCAGCGCGGTCGGACGCCTCCGAAAGTGGGAATGC TCGGCGGGCATCTGGGCGGAGCACAAGCCGCGGCTGGGCCTCGCCCTCTTCGACGATCACGACTCCGTCACGATT GCCCTGAAACTTCTCCGAGAGCAGGCCCTGGAGGTTCCCGTCAAGCGACAGCAGGCGACGGCCAATCCCGCCCAG GACGACGCGTTCGAAGGCATCGAGAAAACAGAGCTGAAGGTGGCAGTCGACGAGGCAACGATGGAGTACCAGGCG TCGCTCAGCGAGGCCAGAGGAGCAGAGGACGCCGAGCTCCAGGGCAGGCTTGAGTCGGCCCGTGCGGCGCTGAAG CAGGTTCAGCTCGAGCTCTTCTACCCCCCGCTCGGCAGCCGAGCCGACGCCGACGCCGACGCGGGCGCCAACGCG AACGACGGCCAGGGCAACGTCGAGGTGGTGAATATCTCCATTGCGCAGGAGGACGAGCTTGCTGACATCCCGGCC GAAATGCGGGAGATTGTGGCCAAGGAGATTGCCGCGTTCCGCGACCGGAGCAACCAGCGCGACATGGAACGCCTT AGGAGGGAGGAGGAAATCGGCGCGCGGTTCCGGCAGCAGAACGGGGCGTCGTCCGGGCCGTCACTGGGAGGAGGA GCAAACAACATTCCGCTGGGCCCGCGGGCAGCGACGATGGCATCGACCGCCTCCGGACCCAAGGGCCAGAACGGG GCCGATCGCAGCGTGTCCTTTGTGAACGGCGGAGCGGGCGATGCAGACCACGCGGCCCACGAGGGGGGCAACGGC ACGGACGCTAGCGACGACGAGCTGTACCGCCGAAGGCTGGCGAAGAAGGAGGACGAGGAGCACAAGATCTTCGGA GAAATGGAGCGCAAGTGGCTGAACCGAGAGCGCTCGAGACAGCTGGCGTTGGACCGCGAGCAGGAGCGCGAGCGG CAGGAAGAGGAGCAGAAGCAGAGACGCAAGGACGAACAGCGCGACCGCGAGATGGGCTGGGACGACGAGCTGGAG ACGAGTCGTAAGACGCACCCGTACTACCGCGACCACGCCTCGTGGGCGAGAAAGCGCGCGGTGGAGCGGCAGGAG GAGGAGATGAGAGACGAGATGGAGCGGCGGGACGAGGACGACGAGCGACGACGCGAGCAGGCGCAGCTGGAGCGA GCACGGGGCCAGGCCGACTCGTTCCTGGACCGGCAGGACCGCGAGGCGGAGCGGCGGCAGGCGGCGTCGGCGCCG GCGCCGCAGCCGTTCAAGCTGTCGCTGGGCGCCGCGGCGCAGCGGGCGCAGGCGTCGCGGGCGATGCCGCAGCGG CGGACGATCGCCGAGGTCGAGGGCCTGCTGGACGACGAGGATGCGGAGCCGTCGGTGCGGCGGCAGCTGGTGCCG ATCCAGATGGACGCCGTCACGGGCCCCGGGGCCATGTCGGAGGAGGAGATATCCCAGGCGGTGCGGGCGCTGGCG CAGGAGATCCCGTCGGACAAGGACGGCCTCTGGGCCTGGGAGGTCAAGTGGGACTACATGGACGAGAGCATCATC GGCGACCGGCTGCGGCCCTTCGTCGAGAAGAAGATCGTCGAGTACCTGGGCGTGCAGGAGGAGATGCTGGTGGCG ACGGTCGAGGAGCACCTCCGCAAGCACGGAACGGCCGCCGGCCTGGTCGAGGAACTGGAAGGGCCCCTGGACGAC GAGGCAGAGGACCTTGTCAAGAAACTCTGGCGCATGGTCATCTTCTTCACCGAGTGCGAGAAGCGCAACTTGCCG ACCTAG
Gene	>Hirsu2|9214 ATGTCCTACAACCAGTACGGGGGTGAGTTGGCGCGGGCCTCGCCGGCGGATGCGGAAGACGCTGGCCGGCTAACC CTCGTTACCTCGTGCAGGAAATCCCTACGGCGCGCCGCCTGGCTACGGCGGCTATGGCAACCTGCCACCCGGCAT GGGTGCTCCCCCTCCCGGCCTAGGTACTGACCTGGCCCGGCCCAGCTCGCGAAGCGGACGCGATGGAGCGGAAAG TGCTGACTCGGAGCTCTCAGGCCCCCCTCCCGGCATGCCATCCGCCCCCGGCATGGCCGCTCCCCCGGGGGTCCC CCAGCCGACGACGCAGCAAGCGAACCGTCCCGCGGGGCTGCCCCCCAGCTTCCAGCCTCCGGCAAACATGCCCAA CATCAACTTTAACGCCCCGGTCATTCGACTCGGCACCGGCACCCCCGGCGGCTCGGGCGGGCGAGGCGAAGGTCC TTCGGCGCCGCCTAGCGGGCGGTCCGGCATGGGCATGGAGAGAGGCGGCGACGCGGGCCGAGAGCGCGCCCGAGA GGCCCCTCAGATTCTCGTGCCCGCCACGGCCGACGAGAAGCTCCGCACGATCGTCATCTACAACCTCACCGAGGG ACTTGGCGGTGACGACGGCGTGCAGAAGATCTGCAGCGCGGTCGGACGCCTCCGAAAGTGGGAATGCTCGGCGGG CATCTGGGCGGAGCACAAGCCGCGGCTGGGCCTCGCCCTCTTCGACGATCACGACTCCGTCACGATTGCCCTGAA ACTTCTCCGAGAGCAGGCCCTGGAGGTTCCCGTCAAGCGACAGCAGGCGACGGCCAATCCCGCCCAGGACGACGC GTTCGAAGGCATCGAGAAAACAGAGCTGAAGGTGGCAGTCGACGAGGCAACGATGGAGTACCAGGCGTCGCTCAG CGAGGCCAGAGGAGCAGAGGACGCCGAGCTCCAGGGCAGGCTTGAGTCGGCCCGTGCGGCGCTGAAGCAGGTTCA GCTCGAGCTCTTCTACCCCCCGCTCGGCAGCCGAGCCGACGCCGACGCCGACGCGGGCGCCAACGCGAACGACGG CCAGGGCAACGTCGAGGTGGTGAATATCTCCATTGCGCAGGAGGACGAGCTTGCTGACATCCCGGCCGAAATGCG GGAGATTGTGGCCAAGGAGATTGCCGCGTTCCGCGACCGGAGCAACCAGCGCGACATGGAACGCCTTAGGAGGGA GGAGGAAATCGGCGCGCGGTTCCGGCAGCAGAACGGGGCGTCGTCCGGGCCGTCACTGGGAGGAGGAGCAAACAA CATTCCGCTGGGCCCGCGGGCAGCGACGATGGCATCGACCGCCTCCGGACCCAAGGGCCAGAACGGGGCCGATCG CAGCGTGTCCTTTGTGAACGGCGGAGCGGGCGATGCAGACCACGCGGCCCACGAGGGGGGCAACGGCACGGACGC TAGCGACGACGAGCTGTACCGCCGAAGGCTGGCGAAGAAGGAGGACGAGGAGCACAAGATCTTCGGAGAAATGGA GCGCAAGTGGCTGAACCGAGAGCGCTCGAGACAGCTGGCGTTGGACCGCGAGCAGGAGCGCGAGCGGCAGGAAGA GGAGCAGAAGCAGAGACGCAAGGACGAACAGCGCGACCGCGAGATGGGCTGGGACGACGAGCTGGAGACGAGTCG TAAGACGCACCCGTACTACCGCGACCACGCCTCGTGGGCGAGAAAGCGCGCGGTGGAGCGGCAGGAGGAGGAGAT GAGAGACGAGATGGAGCGGCGGGACGAGGACGACGAGCGACGACGCGAGCAGGCGCAGCTGGAGCGAGCACGGGG CCAGGCCGACTCGTTCCTGGACCGGCAGGACCGCGAGGCGGAGCGGCGGCAGGCGGCGTCGGCGCCGGCGCCGCA GCCGTTCAAGCTGTCGCTGGGCGCCGCGGCGCAGCGGGCGCAGGCGTCGCGGGCGATGCCGCAGCGGCGGACGAT CGCCGAGGTCGAGGGCCTGCTGGACGACGAGGATGCGGAGCCGTCGGTGCGGCGGCAGCTGGTGCCGATCCAGAT GGACGCCGTCACGGGCCCCGGGGCCATGTCGGAGGAGGAGATATCCCAGGCGGTGCGGGCGCTGGCGCAGGAGAT CCCGTCGGACAAGGACGGCCTCTGGGCCTGGGAGGTCAAGTGGGACTACATGGACGAGAGCATCATCGGCGACCG GCTGCGGCCCTTCGTCGAGAAGAAGATCGTCGAGTACCTGGGCGTGCAGGAGGAGATGCTGGTGGCGACGGTCGA GGAGCACCTCCGCAAGCACGGAACGGCCGCCGGCCTGGTCGAGGAACTGGAAGGGGTAAGTCGATGGATCCCCCG CCCCCTTTGTCACCCTCTCCCTATCCTTCGTGCCTCCGCCCTGCTTGTCTCGGCGCGGAGACTTGTCTGCTTTCT TTTTTTCTTTGCTGACGCAGACACACGCCCAGCCCCTGGACGACGAGGCAGAGGACCTTGTCAAGAAACTCTGGC GCATGGTCATCTTCTTCACCGAGTGCGAGAAGCGCAACTTGCCGACCTAG