© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9202 |
| Gene name | |
| Location | Contig_652:10220..12777 |
| Strand | + |
| Gene length (bp) | 2557 |
| Transcript length (bp) | 1689 |
| Coding sequence length (bp) | 1689 |
| Protein length (aa) | 563 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 9.7E-94 | 27 | 487 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P05316|FUR4_YEAST | Uracil permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUR4 PE=3 SV=2 | 16 | 505 | 4.0E-89 |
| sp|Q04895|DAL4_YEAST | Allantoin permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL4 PE=1 SV=1 | 16 | 505 | 4.0E-87 |
| sp|P38196|FUI1_YEAST | Uridine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUI1 PE=1 SV=1 | 18 | 508 | 3.0E-85 |
| sp|O14035|YEME_SCHPO | Uncharacterized permease C29B12.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.14c PE=3 SV=2 | 18 | 541 | 3.0E-80 |
| sp|Q10279|FUR4_SCHPO | Uracil permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fur4 PE=1 SV=2 | 18 | 505 | 9.0E-79 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P05316|FUR4_YEAST | Uracil permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUR4 PE=3 SV=2 | 16 | 505 | 4.0E-89 |
| sp|Q04895|DAL4_YEAST | Allantoin permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL4 PE=1 SV=1 | 16 | 505 | 4.0E-87 |
| sp|P38196|FUI1_YEAST | Uridine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FUI1 PE=1 SV=1 | 18 | 508 | 3.0E-85 |
| sp|O14035|YEME_SCHPO | Uncharacterized permease C29B12.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.14c PE=3 SV=2 | 18 | 541 | 3.0E-80 |
| sp|Q10279|FUR4_SCHPO | Uracil permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fur4 PE=1 SV=2 | 18 | 505 | 9.0E-79 |
| sp|Q08579|THI72_YEAST | Thiamine transporter THI72 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI72 PE=2 SV=1 | 3 | 506 | 1.0E-74 |
| sp|Q05998|THI7_YEAST | Thiamine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI7 PE=1 SV=1 | 3 | 506 | 7.0E-73 |
| sp|Q08485|NRT1_YEAST | Nicotinamide riboside transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NRT1 PE=1 SV=1 | 3 | 506 | 6.0E-72 |
| sp|Q9P6J5|YHD5_SCHPO | Uncharacterized permease C1683.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.05 PE=3 SV=1 | 3 | 521 | 2.0E-71 |
| sp|Q9LZD0|NCS1_ARATH | Purine-uracil permease NCS1 OS=Arabidopsis thaliana GN=NCS1 PE=1 SV=1 | 11 | 496 | 5.0E-49 |
| sp|P94575|ALLP_BACSU | Probable allantoin permease OS=Bacillus subtilis (strain 168) GN=pucI PE=2 SV=1 | 13 | 504 | 4.0E-48 |
| sp|P75712|ALLP_ECOLI | Putative allantoin permease OS=Escherichia coli (strain K12) GN=ybbW PE=1 SV=2 | 12 | 462 | 2.0E-23 |
| sp|Q01266|YHYC_PSESN | Uncharacterized protein in hyuC 3'region (Fragment) OS=Pseudomonas sp. (strain NS671) PE=3 SV=2 | 25 | 132 | 5.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 59 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 118 | 140 | 22 |
| 4 | 160 | 182 | 22 |
| 5 | 189 | 211 | 22 |
| 6 | 236 | 258 | 22 |
| 7 | 278 | 300 | 22 |
| 8 | 397 | 419 | 22 |
| 9 | 443 | 465 | 22 |
| 10 | 480 | 499 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9202 MGLSSMLRSIELEHVSSLINEDVRPCDAKRRTWSRLAFHNYWLLINCTIATFLTGSTLIPIGLTWWQAIISIVIG NLLVTGAILLSSLQGASYHIGFSVYSRAVWGIWGSHFTIWNRIFLSFVWYGFQAWVGGQCVYLILLSWDPQYESR IGNTLPAETGITSARFVCYVIFSVLSLPFLWIRPHRLQAFFYATSTVTFIFFLVLLIWALATMGPAGFGDTVDGS QASALPAAGPGSAGWQMVFGAMSTMGSIAAGILNQSDFARLARRPGDAFWGQALAYPVYAIYASVLGILVVAATQ RRFGGEAIWSPPALFERLLAADDGPGTRAAVFFAGLALIASQLGSSIPGNALAGGIDLASVCPRYIDIRRGAYIT ALVSPVVNPWRLVTSASIFLSVLSSYGIFLAPMTGMMTANYLILCRRKLKVEDLYRGDAQSIYWYWHGVNWRAFV AWVIGVAPCLPGFVAQVNTSVKVSDGCIELYYLNYMYGYLVSGLIYTALHRLFPVRAIDDFVQQPTSALELQLYY REQWDTPSPEASDIGRMLSGSARTETATIAKDPIAAS* |
| Coding | >Hirsu2|9202 ATGGGCTTGTCGTCGATGCTCCGAAGCATCGAGCTGGAGCACGTCTCGTCCTTGATCAACGAAGATGTGCGTCCT TGCGATGCGAAGAGGCGGACCTGGTCCCGGCTCGCCTTCCACAACTACTGGCTGCTGATCAACTGCACCATCGCG ACCTTCCTGACGGGCAGCACCCTGATCCCCATCGGCCTGACCTGGTGGCAGGCCATCATCAGCATCGTCATCGGC AACCTCCTGGTCACGGGGGCCATCCTCCTTAGCTCATTGCAGGGAGCAAGCTATCACATTGGCTTCTCCGTCTAC AGCCGTGCCGTATGGGGCATCTGGGGGTCTCACTTCACCATCTGGAACCGCATCTTCCTGTCGTTTGTGTGGTAC GGGTTCCAGGCCTGGGTAGGCGGCCAGTGCGTCTACCTGATCCTCCTGTCGTGGGATCCCCAGTATGAGTCGCGC ATCGGCAACACGCTGCCGGCCGAGACGGGCATCACGTCGGCCCGGTTCGTGTGCTACGTCATCTTCTCCGTCCTG AGCCTGCCCTTCCTCTGGATCCGGCCGCATCGGCTGCAGGCCTTCTTCTACGCCACCAGCACCGTCACCTTCATC TTCTTCCTCGTCCTGCTCATCTGGGCCCTGGCCACCATGGGCCCGGCCGGCTTCGGCGACACCGTCGACGGCAGC CAGGCCTCGGCGCTACCGGCGGCCGGGCCCGGCAGCGCGGGCTGGCAGATGGTCTTCGGCGCCATGTCGACCATG GGCTCCATCGCGGCCGGCATCCTCAACCAGAGCGACTTCGCCCGGCTGGCGCGGCGGCCGGGCGACGCCTTCTGG GGCCAGGCCCTGGCCTACCCCGTCTACGCCATCTACGCCTCCGTGCTCGGCATCCTGGTCGTGGCGGCGACGCAG CGGCGCTTCGGCGGCGAGGCCATCTGGAGCCCGCCCGCCCTGTTCGAGCGGCTGCTGGCGGCCGACGACGGGCCC GGCACCCGCGCCGCCGTCTTCTTCGCCGGCCTCGCCCTCATCGCCTCGCAGCTGGGCAGCAGCATCCCCGGCAAC GCGCTGGCCGGCGGCATCGACCTGGCCTCGGTCTGCCCGCGCTACATCGACATCCGCCGCGGCGCCTACATCACC GCCCTCGTCAGCCCGGTCGTCAACCCCTGGCGCCTCGTCACCTCGGCCTCCATCTTCCTCAGCGTCCTCAGCAGC TACGGCATCTTCCTCGCGCCCATGACCGGCATGATGACGGCCAACTACCTCATCCTCTGCCGGCGGAAGCTCAAG GTCGAGGACCTCTACCGCGGCGACGCCCAGAGCATCTACTGGTACTGGCACGGCGTCAACTGGCGCGCCTTCGTC GCGTGGGTCATCGGCGTCGCTCCCTGCCTCCCCGGCTTCGTCGCCCAGGTCAACACGTCGGTCAAGGTGAGCGAC GGCTGCATCGAGCTCTACTACCTCAACTACATGTACGGCTATCTCGTCAGCGGCCTCATCTACACGGCCCTGCAC CGGCTGTTCCCCGTCAGGGCCATCGACGACTTCGTGCAGCAGCCGACGAGCGCGCTCGAGCTCCAGCTGTACTAC AGGGAGCAGTGGGACACGCCATCGCCCGAGGCCAGCGACATCGGCCGCATGCTCTCGGGCAGCGCGAGAACCGAG ACGGCCACGATAGCCAAGGATCCGATCGCGGCCTCCTGA |
| Transcript | >Hirsu2|9202 ATGGGCTTGTCGTCGATGCTCCGAAGCATCGAGCTGGAGCACGTCTCGTCCTTGATCAACGAAGATGTGCGTCCT TGCGATGCGAAGAGGCGGACCTGGTCCCGGCTCGCCTTCCACAACTACTGGCTGCTGATCAACTGCACCATCGCG ACCTTCCTGACGGGCAGCACCCTGATCCCCATCGGCCTGACCTGGTGGCAGGCCATCATCAGCATCGTCATCGGC AACCTCCTGGTCACGGGGGCCATCCTCCTTAGCTCATTGCAGGGAGCAAGCTATCACATTGGCTTCTCCGTCTAC AGCCGTGCCGTATGGGGCATCTGGGGGTCTCACTTCACCATCTGGAACCGCATCTTCCTGTCGTTTGTGTGGTAC GGGTTCCAGGCCTGGGTAGGCGGCCAGTGCGTCTACCTGATCCTCCTGTCGTGGGATCCCCAGTATGAGTCGCGC ATCGGCAACACGCTGCCGGCCGAGACGGGCATCACGTCGGCCCGGTTCGTGTGCTACGTCATCTTCTCCGTCCTG AGCCTGCCCTTCCTCTGGATCCGGCCGCATCGGCTGCAGGCCTTCTTCTACGCCACCAGCACCGTCACCTTCATC TTCTTCCTCGTCCTGCTCATCTGGGCCCTGGCCACCATGGGCCCGGCCGGCTTCGGCGACACCGTCGACGGCAGC CAGGCCTCGGCGCTACCGGCGGCCGGGCCCGGCAGCGCGGGCTGGCAGATGGTCTTCGGCGCCATGTCGACCATG GGCTCCATCGCGGCCGGCATCCTCAACCAGAGCGACTTCGCCCGGCTGGCGCGGCGGCCGGGCGACGCCTTCTGG GGCCAGGCCCTGGCCTACCCCGTCTACGCCATCTACGCCTCCGTGCTCGGCATCCTGGTCGTGGCGGCGACGCAG CGGCGCTTCGGCGGCGAGGCCATCTGGAGCCCGCCCGCCCTGTTCGAGCGGCTGCTGGCGGCCGACGACGGGCCC GGCACCCGCGCCGCCGTCTTCTTCGCCGGCCTCGCCCTCATCGCCTCGCAGCTGGGCAGCAGCATCCCCGGCAAC GCGCTGGCCGGCGGCATCGACCTGGCCTCGGTCTGCCCGCGCTACATCGACATCCGCCGCGGCGCCTACATCACC GCCCTCGTCAGCCCGGTCGTCAACCCCTGGCGCCTCGTCACCTCGGCCTCCATCTTCCTCAGCGTCCTCAGCAGC TACGGCATCTTCCTCGCGCCCATGACCGGCATGATGACGGCCAACTACCTCATCCTCTGCCGGCGGAAGCTCAAG GTCGAGGACCTCTACCGCGGCGACGCCCAGAGCATCTACTGGTACTGGCACGGCGTCAACTGGCGCGCCTTCGTC GCGTGGGTCATCGGCGTCGCTCCCTGCCTCCCCGGCTTCGTCGCCCAGGTCAACACGTCGGTCAAGGTGAGCGAC GGCTGCATCGAGCTCTACTACCTCAACTACATGTACGGCTATCTCGTCAGCGGCCTCATCTACACGGCCCTGCAC CGGCTGTTCCCCGTCAGGGCCATCGACGACTTCGTGCAGCAGCCGACGAGCGCGCTCGAGCTCCAGCTGTACTAC AGGGAGCAGTGGGACACGCCATCGCCCGAGGCCAGCGACATCGGCCGCATGCTCTCGGGCAGCGCGAGAACCGAG ACGGCCACGATAGCCAAGGATCCGATCGCGGCCTCCTGA |
| Gene | >Hirsu2|9202 ATGGGCTTGTCGTCGATGCTCCGAAGCATCGAGCTGGAGCACGTCTCGTCCTTGATCGTCCGTCTGCCCCTGTTC CGTTTCCTGCTTGGGGGAAAAGGGGGGGGGGGGGGGAAGAGGTTTCGTCACAACTGACGGGCTTGGCTGACGCTT TGCTGCGGCGGCCGTGACAGAACGAAGATGTGCGTCCTTGCGATGCGAAGAGGCGGACCTGGTCCCGGCTCGCCT TCCACAACTACTGTGCGTTTGCGCGTCTCGAGGCCGACGTCGGCTTTCGATGCTTCCGGCCACGTTCCCCGGCTG ACTCTCTCTCGCTCTGTCGAGCAGGGCTGCTGATCAACTGCACCATCGCGACCTTCCTGACGGGCAGCACCCTGA TCCCCATCGGCCTGACCTGGTGGCAGGCCATCATCAGTACGGCCGGCCACCCGACGCTCAGGGGCGCCCTGCTCG GCCAATGCGCCCGAAGGCTAATCCCGGACGAACAGGCATCGTCATCGGCAACCTCCTGGTCACGGGGGCCATCCT CCTTAGCTCATTGCAGGGAGCAAGCTATCACAGTACTGCGCCCTCTGTCCCCGCTGCCCAGCTCCTGGGCCCCCC TCCCCTCCCCCTCCCCTGTCCTCCTCTTCGCACCTCATCCGCCTGCGCTTTCTGCCCCGTCTCCGGTCTCTCACT CTTTGGCGCCCTTTCGCCATGATGAAGACGGAGAGGGCGTGAGGGAAGCGGGAAGAAGGCCTCGGCCGCCCCGAG GAGAGATTGAAGGGCGCGACAGCAAGCTGACCTGATTCCTCGTCCCTCGTCCCAAGTTGGCTTCTCCGTCTACAG CCGTGCCGTATGGGGCATCTGGGGGTCTCACTTCACCATCTGGAACCGCATCTTCCTGTCGTTTGGTGCGTCACC CGTCCTGCCGCGAAGAACAACGTTCCGTTGTCGATGGGAAAGCTGACCGCGGACGGACGATATACGATTCCAGTG TGGTAAGTAAGTCCCGGACGGCGTATTGCCTCCCGCCTCCTCCCGACCCGATGGATCCTCCCCCTGCCCCCTTTC CTCTCGAGGTTTACCGATGGGGCGGCGAACGAGATACAGACGAGAGACGGGCATGGACTGATGATGGTATGCATG CGCGTGTAGGTACGGGTTCCAGGCCTGGGTAGGCGGCCAGTGCGTCTACCTGATCCTCCTGTCGTGGGATCCCCA GTATGAGTCGCGCATCGGCAACACGCTGCCGGCCGAGACGGGCATCACGTCGGCCCGGTTCGTGTGCTACGTCAT CTTCTCCGTCCTGAGCCTGCCCTTCCTCTGGATCCGGCCGCATCGGCTGCAGGCCTTCTTCTACGCCACCAGCAC CGTCACCTTCATCTTCTTCCTCGTCCTGCTCATCTGGGCCCTGGCCACCATGGGCCCGGCCGGCTTCGGCGACAC CGTCGACGGCAGCCAGGCCTCGGCGCTACCGGCGGCCGGGCCCGGCAGCGCGGGCTGGCAGATGGTCTTCGGCGC CATGTCGACCATGGGCTCCATCGCGGCCGGCATCCTCAACCAGAGCGACTTCGCCCGGCTGGCGCGGCGGCCGGG CGACGCCTTCTGGGGCCAGGCCCTGGCCTACCCCGTCTACGCCATCTACGCCTCCGTGCTCGGCATCCTGGTCGT GGCGGCGACGCAGCGGCGCTTCGGCGGCGAGGCCATCTGGAGCCCGCCCGCCCTGTTCGAGCGGCTGCTGGCGGC CGACGACGGGCCCGGCACCCGCGCCGCCGTCTTCTTCGCCGGCCTCGCCCTCATCGCCTCGCAGCTGGGCAGCAG CATCCCCGGCAACGCGCTGGCCGGCGGCATCGACCTGGCCTCGGTCTGCCCGCGCTACATCGACATCCGCCGCGG CGCCTACATCACCGCCCTCGTCAGCCCGGTCGTCAACCCCTGGCGCCTCGTCACCTCGGCCTCCATCTTCCTCAG CGTCCTCAGCAGCTACGGCATCTTCCTCGCGCCCATGACCGGCATGATGACGGCCAACTACCTCATCCTCTGCCG GCGGAAGCTCAAGGTCGAGGACCTCTACCGCGGCGACGCCCAGAGCATCTACTGGTACTGGCACGGCGTCAACTG GCGCGCCTTCGTCGCGGTACGCGAATCTGCTTCCTCTCTCTCTTCTCCCCTCTCTGCCTCATCTCCCCCCTTCTC ATACGCTTCTGTCCGCTGCTTTTCTTCTTCTGACAAAAGGCCGTAGTGGGTCATCGGCGTCGCTCCCTGCCTCCC CGGCTTCGTCGCCCAGGTCAACACGTCGGTCAAGGTGAGCGACGGCTGCATCGAGCTCTACTACCTCAACTACAT GTACGGCTATCTCGTCAGCGGCCTCATCTACACGGCCCTGCACCGGCTGTTCCCCGTCAGGGCCATCGACGACTT CGTGCAGCAGCCGACGAGCGCGCTCGAGCTCCAGCTGTACTACAGGGAGCAGTGGGACACGCCATCGCCCGAGGC CAGCGACATCGGCCGCATGCTCTCGGGCAGCGCGAGAACCGAGACGGCCACGATAGCCAAGGATCCGATCGCGGC CTCCTGA |