© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|92 |
| Gene name | |
| Location | Contig_1011:792..1617 |
| Strand | + |
| Gene length (bp) | 825 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.5864 | 0.4672 | 0.1329 | 0.438 | 0.1334 | 0.1104 | 0.0773 | 0.0659 | 0.0374 | 0.0014 |
| Orthofinder run ID | 4 |
| Orthogroup | 7149 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|03726 |
| Ophiocordyceps kimflemingae | Ophio5|4824 |
| Ophiocordyceps subramaniannii | Hirsu2|92 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|92 MSWFRGGDRESEHFSYSRKSYCRSPTSYSSSDYDDNFVVPRCGRHRRRRECPDFGPPSPEIHYTKVYPVTERIIY CDAVEKKKEAPPPPPPPPPPPPKMKPTCECKAPKMVCSCCGKEYKEEVCCESKEAEEKKKKEEEEKKKKEEEEKN KACAKCQSKCDGCKKKDDEGKKKDEADTHVVLTHDKKKRLEILVWDDTDGPLARKYGDTYPLAIADLAETEDIIE MLAPERGRHKIEVRWRNGRREELDGSIPVESILRSARALHFRMRRSARW* |
| Coding | >Hirsu2|92 ATGTCGTGGTTCCGTGGAGGCGATCGGGAATCCGAGCATTTCAGTTACTCGCGCAAGTCCTATTGCAGGAGCCCG ACGTCGTATAGCAGCTCCGACTACGACGACAACTTCGTGGTGCCGCGTTGCGGGAGGCACAGACGACGACGTGAG TGCCCAGACTTTGGCCCGCCCTCGCCCGAGATACACTATACCAAGGTCTACCCAGTCACCGAGAGGATCATCTAC TGCGACGCCGTCGAGAAGAAGAAGGAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCCAAGATGAAG CCGACGTGCGAGTGCAAAGCGCCCAAGATGGTGTGCAGTTGCTGTGGCAAGGAGTACAAGGAGGAGGTCTGCTGC GAGAGCAAGGAGGCCGAAGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAC AAGGCTTGCGCCAAGTGCCAGTCCAAGTGCGACGGGTGCAAGAAGAAGGACGACGAGGGTAAGAAGAAGGACGAG GCCGACACGCACGTCGTCTTGACGCACGACAAGAAGAAGCGCCTCGAGATCCTCGTCTGGGATGACACGGATGGG CCGCTGGCCCGCAAGTACGGCGACACGTACCCGCTGGCCATCGCCGACCTGGCCGAGACCGAAGACATCATCGAA ATGCTGGCGCCCGAGCGCGGCCGCCACAAGATCGAGGTCCGCTGGCGCAACGGCCGCCGCGAGGAGCTCGACGGC TCCATCCCCGTCGAGAGCATCCTCCGCAGCGCCCGCGCCCTGCACTTCAGGATGAGGCGCTCGGCCCGCTGGTAG |
| Transcript | >Hirsu2|92 ATGTCGTGGTTCCGTGGAGGCGATCGGGAATCCGAGCATTTCAGTTACTCGCGCAAGTCCTATTGCAGGAGCCCG ACGTCGTATAGCAGCTCCGACTACGACGACAACTTCGTGGTGCCGCGTTGCGGGAGGCACAGACGACGACGTGAG TGCCCAGACTTTGGCCCGCCCTCGCCCGAGATACACTATACCAAGGTCTACCCAGTCACCGAGAGGATCATCTAC TGCGACGCCGTCGAGAAGAAGAAGGAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCCAAGATGAAG CCGACGTGCGAGTGCAAAGCGCCCAAGATGGTGTGCAGTTGCTGTGGCAAGGAGTACAAGGAGGAGGTCTGCTGC GAGAGCAAGGAGGCCGAAGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAC AAGGCTTGCGCCAAGTGCCAGTCCAAGTGCGACGGGTGCAAGAAGAAGGACGACGAGGGTAAGAAGAAGGACGAG GCCGACACGCACGTCGTCTTGACGCACGACAAGAAGAAGCGCCTCGAGATCCTCGTCTGGGATGACACGGATGGG CCGCTGGCCCGCAAGTACGGCGACACGTACCCGCTGGCCATCGCCGACCTGGCCGAGACCGAAGACATCATCGAA ATGCTGGCGCCCGAGCGCGGCCGCCACAAGATCGAGGTCCGCTGGCGCAACGGCCGCCGCGAGGAGCTCGACGGC TCCATCCCCGTCGAGAGCATCCTCCGCAGCGCCCGCGCCCTGCACTTCAGGATGAGGCGCTCGGCCCGCTGGTAG |
| Gene | >Hirsu2|92 ATGTCGTGGTTCCGTGGAGGCGATCGGGAATCCGAGCATTTCAGTTACTCGCGCAAGTCCTATTGCAGGAGCCCG ACGTCGTATAGCAGCTCCGACTACGACGACAACTTCGTGGTGCCGCGTTGCGGGAGGCACAGACGACGACGTGAG TGCCCAGACTTTGGCCCGCCCTCGCCCGAGATACACTATACCAAGGTCTACCCAGTCACCGAGAGGATCATCTAC TGCGACGCCGTCGAGAAGAAGAAGGAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCCAAGATGAAG CCGACGTGCGAGTGCAAAGCGCCCAAGATGGTGTGCAGTTGCTGTGGCAAGGAGTACAAGGAGGAGGTCTGCTGC GAGAGCAAGGAGGCCGAAGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAGAAGAAGGAGGAGGAGGAGAAGAAC AAGGCTTGCGCCAAGTGCCAGTCCAAGTGCGACGGGTGCAAGAAGAAGGACGACGAGGGTAAGAAGAAGGACGAG GCCGACACGCACGTCGTCTTGACGCACGACAAGAAGAAGCGCCTCGAGATCCTCGTCTGGGATGACACGGATGGG CCGCTGGCCCGCAAGTACGGCGACACGTACCCGCTGGCCATCGCCGACCTGGCCGAGACCGAAGACATCATCGAA ATGCTGGCGCCCGAGCGCGGCCGCCACAAGATCGAGGTCCGCTGGCGCAACGGCCGCCGCGAGGAGCTCGACGGC TCCATCCCCGTCGAGAGCATCCTCCGCAGCGCCCGCGCCCTGCACTTCAGGATGAGGCGCTCGGCCCGCTGGTAG |