Protein ID | Hirsu2|9191 |
Gene name | |
Location | Contig_650:9743..10393 |
Strand | + |
Gene length (bp) | 650 |
Transcript length (bp) | 576 |
Coding sequence length (bp) | 576 |
Protein length (aa) | 192 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01476 | LysM | LysM domain | 3.6E-08 | 62 | 101 |
PF01476 | LysM | LysM domain | 2.6E-04 | 143 | 182 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 36 | 191 | 5.0E-43 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 35 | 191 | 1.0E-40 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 36 | 188 | 1.0E-39 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 1 | 191 | 7.0E-20 |
sp|D4AZ68|LYSM3_ARTBC | LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 | 58 | 189 | 7.0E-17 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 36 | 191 | 5.0E-43 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 35 | 191 | 1.0E-40 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 36 | 188 | 1.0E-39 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 1 | 191 | 7.0E-20 |
sp|D4AZ68|LYSM3_ARTBC | LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 | 58 | 189 | 7.0E-17 |
sp|D4B4P8|LYSM2_ARTBC | LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 | 66 | 191 | 6.0E-16 |
sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 137 | 189 | 5.0E-10 |
sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 54 | 108 | 2.0E-09 |
sp|D4AZ68|LYSM3_ARTBC | LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 | 47 | 108 | 6.0E-09 |
sp|D4AVW3|LYSM5_ARTBC | LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 | 139 | 189 | 1.0E-07 |
sp|D4AVW3|LYSM5_ARTBC | LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 | 49 | 114 | 7.0E-07 |
sp|D4B4Q2|LYSM4_ARTBC | LysM domain-containing protein ARB_03442 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03442 PE=3 SV=2 | 136 | 187 | 2.0E-06 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9191 MVNLQSGLLLLGGAQAALGFLPGPRDAGAAEHEAASPVGEAPGAVTPQPALPNMAKDCTRFHLVQSGDTCWQIAA RYGVETAQFLRLNPSAGPGCRSLWAGYYSCVGVKAKRPTRTEVSRRAAGVETPQPVQPHMVANCNKFHLVRAGDT CGLIAALYAVSVDDVILWNPDAGADCTTLWAGYYACVGIGG* |
Coding | >Hirsu2|9191 ATGGTCAATCTCCAAAGCGGCCTGTTGCTCCTCGGGGGCGCTCAGGCGGCGCTCGGCTTCCTCCCCGGCCCGCGC GACGCCGGGGCGGCCGAGCACGAAGCGGCGTCTCCGGTCGGCGAGGCTCCCGGAGCCGTGACGCCGCAGCCGGCC CTGCCGAACATGGCCAAGGACTGCACGCGCTTCCACCTGGTCCAGTCCGGGGACACGTGCTGGCAGATCGCGGCG CGGTACGGCGTCGAGACGGCGCAGTTCCTGCGGTTGAACCCCAGCGCCGGGCCCGGGTGCCGCTCGCTCTGGGCC GGCTACTACTCGTGCGTCGGCGTCAAGGCCAAGAGGCCGACCAGGACGGAGGTGTCGAGGCGCGCGGCCGGCGTC GAGACGCCGCAGCCGGTCCAGCCGCACATGGTGGCCAACTGCAACAAGTTCCATCTGGTCCGGGCCGGCGACACG TGCGGCCTGATCGCGGCCTTGTACGCCGTCTCCGTCGACGACGTCATTCTCTGGAACCCCGACGCCGGCGCGGAC TGCACGACGCTCTGGGCCGGCTACTACGCCTGCGTCGGCATCGGCGGCTGA |
Transcript | >Hirsu2|9191 ATGGTCAATCTCCAAAGCGGCCTGTTGCTCCTCGGGGGCGCTCAGGCGGCGCTCGGCTTCCTCCCCGGCCCGCGC GACGCCGGGGCGGCCGAGCACGAAGCGGCGTCTCCGGTCGGCGAGGCTCCCGGAGCCGTGACGCCGCAGCCGGCC CTGCCGAACATGGCCAAGGACTGCACGCGCTTCCACCTGGTCCAGTCCGGGGACACGTGCTGGCAGATCGCGGCG CGGTACGGCGTCGAGACGGCGCAGTTCCTGCGGTTGAACCCCAGCGCCGGGCCCGGGTGCCGCTCGCTCTGGGCC GGCTACTACTCGTGCGTCGGCGTCAAGGCCAAGAGGCCGACCAGGACGGAGGTGTCGAGGCGCGCGGCCGGCGTC GAGACGCCGCAGCCGGTCCAGCCGCACATGGTGGCCAACTGCAACAAGTTCCATCTGGTCCGGGCCGGCGACACG TGCGGCCTGATCGCGGCCTTGTACGCCGTCTCCGTCGACGACGTCATTCTCTGGAACCCCGACGCCGGCGCGGAC TGCACGACGCTCTGGGCCGGCTACTACGCCTGCGTCGGCATCGGCGGCTGA |
Gene | >Hirsu2|9191 ATGGTCAATCTCCAAAGCGGCCTGTTGCTCCTCGGGGGCGCTCAGGCGGCGCTCGGCTTCCTCCCCGGCCCGCGC GACGCCGGGGCGGCCGAGCACGAAGCGGCGTCTCCGGTCGGCGAGGCTCCCGGTGCGTCACACGGACACGGGGCA TGACGACATCTCCCTCTCCCTCTCCCTCTCTGGGCTGACCGGCGGCCGTAGGAGCCGTGACGCCGCAGCCGGCCC TGCCGAACATGGCCAAGGACTGCACGCGCTTCCACCTGGTCCAGTCCGGGGACACGTGCTGGCAGATCGCGGCGC GGTACGGCGTCGAGACGGCGCAGTTCCTGCGGTTGAACCCCAGCGCCGGGCCCGGGTGCCGCTCGCTCTGGGCCG GCTACTACTCGTGCGTCGGCGTCAAGGCCAAGAGGCCGACCAGGACGGAGGTGTCGAGGCGCGCGGCCGGCGTCG AGACGCCGCAGCCGGTCCAGCCGCACATGGTGGCCAACTGCAACAAGTTCCATCTGGTCCGGGCCGGCGACACGT GCGGCCTGATCGCGGCCTTGTACGCCGTCTCCGTCGACGACGTCATTCTCTGGAACCCCGACGCCGGCGCGGACT GCACGACGCTCTGGGCCGGCTACTACGCCTGCGTCGGCATCGGCGGCTGA |