Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9188
Gene name
LocationContig_65:43060..43900
Strand+
Gene length (bp)840
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 74 96 22
3 109 131 22
4 151 173 22
5 186 205 19
6 215 237 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9188
MLASVSAALDRCGRRLAASPRGVQYACIASGLVAEACAFAAFAASGFLPPLGPSLSAEETARHYREHRTGIEAGA
ALMLLVGMFYLAFSAAASGYMRRIPGVPYAVCAAQFAGGVVGSVVFTMAGIILGAANYRPDRPVEITQALNDLFW
LAMTMPWPGFALQVVAFAYAVLIDGRPGAPFPKPLVAFNLVVAATFVPATGAHCVYSGPLAWNGAVTFWLGLAAF
ACQVAADAFFLMRALASETTADRPAAVDRAASSSSSGADQKMLVGKDGGCTGHA*
Coding >Hirsu2|9188
ATGCTGGCCTCGGTGTCCGCGGCGCTGGACCGGTGCGGGCGACGTCTTGCGGCGTCGCCGCGCGGCGTGCAGTAT
GCCTGCATCGCGAGCGGCCTCGTGGCCGAGGCGTGCGCCTTCGCCGCCTTCGCGGCGAGCGGCTTCCTGCCGCCG
CTCGGGCCGTCGCTGAGCGCGGAGGAGACGGCGCGGCACTACCGGGAGCACCGGACGGGCATCGAGGCCGGGGCG
GCGCTGATGCTGCTGGTCGGCATGTTCTACCTCGCCTTCTCGGCCGCGGCGTCGGGCTACATGCGGCGGATCCCC
GGCGTGCCGTACGCCGTCTGCGCCGCGCAGTTCGCCGGCGGCGTCGTCGGCAGCGTCGTCTTCACCATGGCCGGC
ATCATCCTCGGCGCCGCCAACTACCGGCCGGACCGGCCGGTCGAGATCACGCAGGCGCTCAACGACCTGTTCTGG
CTGGCCATGACGATGCCGTGGCCCGGCTTCGCGCTGCAGGTCGTCGCCTTCGCCTACGCCGTCCTGATCGACGGC
CGGCCCGGGGCCCCGTTCCCGAAGCCGCTGGTGGCCTTCAACTTGGTCGTCGCCGCCACCTTCGTCCCGGCCACG
GGCGCCCACTGCGTCTACTCCGGGCCGCTGGCCTGGAACGGCGCCGTCACCTTCTGGCTCGGGCTCGCCGCCTTC
GCCTGCCAGGTCGCCGCCGACGCCTTCTTCCTCATGCGGGCCTTGGCGTCGGAGACGACGGCGGACCGGCCGGCG
GCTGTCGACCGGGCTGCCTCGAGCTCGTCTTCGGGGGCCGACCAGAAGATGCTGGTCGGCAAGGACGGCGGCTGC
ACCGGACATGCTTGA
Transcript >Hirsu2|9188
ATGCTGGCCTCGGTGTCCGCGGCGCTGGACCGGTGCGGGCGACGTCTTGCGGCGTCGCCGCGCGGCGTGCAGTAT
GCCTGCATCGCGAGCGGCCTCGTGGCCGAGGCGTGCGCCTTCGCCGCCTTCGCGGCGAGCGGCTTCCTGCCGCCG
CTCGGGCCGTCGCTGAGCGCGGAGGAGACGGCGCGGCACTACCGGGAGCACCGGACGGGCATCGAGGCCGGGGCG
GCGCTGATGCTGCTGGTCGGCATGTTCTACCTCGCCTTCTCGGCCGCGGCGTCGGGCTACATGCGGCGGATCCCC
GGCGTGCCGTACGCCGTCTGCGCCGCGCAGTTCGCCGGCGGCGTCGTCGGCAGCGTCGTCTTCACCATGGCCGGC
ATCATCCTCGGCGCCGCCAACTACCGGCCGGACCGGCCGGTCGAGATCACGCAGGCGCTCAACGACCTGTTCTGG
CTGGCCATGACGATGCCGTGGCCCGGCTTCGCGCTGCAGGTCGTCGCCTTCGCCTACGCCGTCCTGATCGACGGC
CGGCCCGGGGCCCCGTTCCCGAAGCCGCTGGTGGCCTTCAACTTGGTCGTCGCCGCCACCTTCGTCCCGGCCACG
GGCGCCCACTGCGTCTACTCCGGGCCGCTGGCCTGGAACGGCGCCGTCACCTTCTGGCTCGGGCTCGCCGCCTTC
GCCTGCCAGGTCGCCGCCGACGCCTTCTTCCTCATGCGGGCCTTGGCGTCGGAGACGACGGCGGACCGGCCGGCG
GCTGTCGACCGGGCTGCCTCGAGCTCGTCTTCGGGGGCCGACCAGAAGATGCTGGTCGGCAAGGACGGCGGCTGC
ACCGGACATGCTTGA
Gene >Hirsu2|9188
ATGCTGGCCTCGGTGTCCGCGGCGCTGGACCGGTGCGGGCGACGTCTTGCGGCGTCGCCGCGCGGCGTGCAGTAT
GCCTGCATCGCGAGCGGCCTCGTGGCCGAGGCGTGCGCCTTCGCCGCCTTCGCGGCGAGCGGCTTCCTGCCGCCG
CTCGGGCCGTCGCTGAGCGCGGAGGAGACGGCGCGGCACTACCGGGAGCACCGGACGGGCATCGAGGCCGGGGCG
GCGCTGATGCTGCTGGTCGGCATGTTCTACCTCGCCTTCTCGGCCGCGGCGTCGGGCTACATGCGGCGGATCCCC
GGCGTGCCGTACGCCGTCTGCGCCGCGCAGTTCGCCGGCGGCGTCGTCGGCAGCGTCGTCTTCACCATGGCCGGC
ATCATCCTCGGCGCCGCCAACTACCGGCCGGACCGGCCGGTCGAGATCACGCAGGCGCTCAACGACCTGTTCTGG
CTGGCCATGACGATGCCGTGGCCCGGCTTCGCGCTGCAGGTCGTCGCCTTCGCCTACGCCGTCCTGATCGACGGC
CGGCCCGGGGCCCCGTTCCCGAAGCCGCTGGTGGCCTTCAACTTGGTCGTCGCCGCCACCTTCGTCCCGGCCACG
GGCGCCCACTGCGTCTACTCCGGGCCGCTGGCCTGGAACGGCGCCGTCACCTTCTGGCTCGGGCTCGCCGCCTTC
GCCTGCCAGGTCGCCGCCGACGCCTTCTTCCTCATGCGGGCCTTGGCGTCGGAGACGACGGCGGACCGGCCGGCG
GCTGTCGACCGGGCTGCCTCGAGCTCGTCTTCGGGGGCCGACCAGAAGATGCTGGTCGGCAAGGACGGCGGCTGC
ACCGGACATGCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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