Protein ID | Hirsu2|9185 |
Gene name | |
Location | Contig_65:31604..32132 |
Strand | + |
Gene length (bp) | 528 |
Transcript length (bp) | 528 |
Coding sequence length (bp) | 528 |
Protein length (aa) | 176 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12296 | HsbA | Hydrophobic surface binding protein A | 4.4E-15 | 23 | 140 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0663 | 0.0483 | 0.9491 | 0.0794 | 0.0379 | 0.013 | 0.1745 | 0.1427 | 0.0655 | 0.0034 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.694914 |
Orthofinder run ID | 4 |
Orthogroup | 6308 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9185 MHVKALSALTVSVLAVTVSGRVAVQDSINKITENMAATERSISTWQGGLLTVAPVLLRANNLLNSMQDGVKATAD SAELSGPQARAVLDKVEQSGKAARRLTDKVVDAKAKFNQIVLGDVIVSGLMKAYGDAAQDLGTALGNKLPSSKER VATSIREIQDGLAKASKAYGRRTAQ* |
Coding | >Hirsu2|9185 ATGCACGTCAAGGCCCTCTCCGCGCTCACCGTCTCGGTCCTGGCCGTCACCGTCTCCGGCCGCGTTGCGGTCCAG GACAGCATCAACAAAATCACCGAAAACATGGCCGCCACCGAGCGGAGCATCAGCACCTGGCAGGGCGGCCTCTTG ACCGTGGCCCCCGTCCTGCTACGGGCCAACAACCTCCTCAACAGCATGCAGGACGGCGTCAAGGCCACCGCTGAC TCGGCCGAGCTCAGCGGCCCGCAGGCCCGGGCGGTGCTGGACAAGGTCGAGCAGAGCGGCAAGGCGGCCCGCCGT CTCACGGACAAGGTTGTCGACGCCAAGGCCAAGTTCAACCAGATCGTCCTGGGCGATGTCATAGTCTCCGGCCTC ATGAAGGCGTACGGCGACGCTGCCCAGGACTTGGGCACGGCCCTGGGCAACAAGTTGCCCAGCTCCAAGGAGCGT GTTGCGACCTCGATTCGTGAGATCCAGGATGGCCTTGCGAAGGCGTCTAAGGCTTACGGCCGTCGAACCGCCCAG TGA |
Transcript | >Hirsu2|9185 ATGCACGTCAAGGCCCTCTCCGCGCTCACCGTCTCGGTCCTGGCCGTCACCGTCTCCGGCCGCGTTGCGGTCCAG GACAGCATCAACAAAATCACCGAAAACATGGCCGCCACCGAGCGGAGCATCAGCACCTGGCAGGGCGGCCTCTTG ACCGTGGCCCCCGTCCTGCTACGGGCCAACAACCTCCTCAACAGCATGCAGGACGGCGTCAAGGCCACCGCTGAC TCGGCCGAGCTCAGCGGCCCGCAGGCCCGGGCGGTGCTGGACAAGGTCGAGCAGAGCGGCAAGGCGGCCCGCCGT CTCACGGACAAGGTTGTCGACGCCAAGGCCAAGTTCAACCAGATCGTCCTGGGCGATGTCATAGTCTCCGGCCTC ATGAAGGCGTACGGCGACGCTGCCCAGGACTTGGGCACGGCCCTGGGCAACAAGTTGCCCAGCTCCAAGGAGCGT GTTGCGACCTCGATTCGTGAGATCCAGGATGGCCTTGCGAAGGCGTCTAAGGCTTACGGCCGTCGAACCGCCCAG TGA |
Gene | >Hirsu2|9185 ATGCACGTCAAGGCCCTCTCCGCGCTCACCGTCTCGGTCCTGGCCGTCACCGTCTCCGGCCGCGTTGCGGTCCAG GACAGCATCAACAAAATCACCGAAAACATGGCCGCCACCGAGCGGAGCATCAGCACCTGGCAGGGCGGCCTCTTG ACCGTGGCCCCCGTCCTGCTACGGGCCAACAACCTCCTCAACAGCATGCAGGACGGCGTCAAGGCCACCGCTGAC TCGGCCGAGCTCAGCGGCCCGCAGGCCCGGGCGGTGCTGGACAAGGTCGAGCAGAGCGGCAAGGCGGCCCGCCGT CTCACGGACAAGGTTGTCGACGCCAAGGCCAAGTTCAACCAGATCGTCCTGGGCGATGTCATAGTCTCCGGCCTC ATGAAGGCGTACGGCGACGCTGCCCAGGACTTGGGCACGGCCCTGGGCAACAAGTTGCCCAGCTCCAAGGAGCGT GTTGCGACCTCGATTCGTGAGATCCAGGATGGCCTTGCGAAGGCGTCTAAGGCTTACGGCCGTCGAACCGCCCAG TGA |