Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9183
Gene name
Location	Contig_65:27927..28564
Strand	+
Gene length (bp)	637
Transcript length (bp)	420
Coding sequence length (bp)	420
Protein length (aa)	140

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08881	CVNH	CVNH domain	5.0E-15	32	131

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9183 MKVHVVSSLVVLVPLALAVPQLLPMFPRRGGFYETCLRFWLKEARRNLLEADCHNDTGKMVRSTLDLNQCLAFRK GLLKGAPYGEFSEHCDKTSCTLKSTSYQCKCNIGHKAWRVSAVDLNEVVSNKNGFLLCYGLEGD*
Coding	>Hirsu2\|9183 ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA GGCCTCTTGAAGGGCGCTCCATACGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACC AGTTATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAACGAGGTGGTCTCC AACAAGAACGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA
Transcript	>Hirsu2\|9183 ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA GGCCTCTTGAAGGGCGCTCCATACGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACC AGTTATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAACGAGGTGGTCTCC AACAAGAACGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA
Gene	>Hirsu2\|9183 ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA GGCCTCTTGAAGGGCGCTCCATAGTAAGTTGGCCCGAAGACGAGGTTTTGCCTGCTCCGAGCAACTGGGGACGCA GAGAAGGAGAACGGGCCTGGAACGCAGAGCTCGGCCGGGGGCTCAACTCAGCTGCCGGACGCGCATGCTGACAAT GGGCGATTTCCAACCTCTAGCGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACCAGT TATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAGTACGTCGCCCCGACGA CACTTGATATTGAGGGCTTGGTCATCCCGCTGACCGGCGAGATGAGATTCCAGACGAGGTGGTCTCCAACAAGAA CGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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