Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9183
Gene name
LocationContig_65:27927..28564
Strand+
Gene length (bp)637
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08881 CVNH CVNH domain 5.0E-15 32 131

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0967 0.054 0.9567 0.0551 0.0827 0.0348 0.1487 0.2463 0.1181 0.0162

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999811

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10838
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9183 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9183
MKVHVVSSLVVLVPLALAVPQLLPMFPRRGGFYETCLRFWLKEARRNLLEADCHNDTGKMVRSTLDLNQCLAFRK
GLLKGAPYGEFSEHCDKTSCTLKSTSYQCKCNIGHKAWRVSAVDLNEVVSNKNGFLLCYGLEGD*
Coding >Hirsu2|9183
ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG
TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA
GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA
GGCCTCTTGAAGGGCGCTCCATACGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACC
AGTTATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAACGAGGTGGTCTCC
AACAAGAACGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA
Transcript >Hirsu2|9183
ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG
TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA
GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA
GGCCTCTTGAAGGGCGCTCCATACGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACC
AGTTATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAACGAGGTGGTCTCC
AACAAGAACGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA
Gene >Hirsu2|9183
ATGAAAGTCCATGTCGTCTCGTCACTCGTCGTGCTCGTGCCTCTGGCGCTGGCCGTGCCCCAGCTGCTGCCCATG
TTCCCGAGACGGGGCGGCTTCTACGAAACCTGCCTGCGTTTCTGGCTGAAGGAAGCCCGTCGTAACCTCCTGGAA
GCCGATTGCCACAACGACACGGGCAAGATGGTACGCAGCACTCTCGACCTTAATCAATGCCTGGCCTTCCGGAAA
GGCCTCTTGAAGGGCGCTCCATAGTAAGTTGGCCCGAAGACGAGGTTTTGCCTGCTCCGAGCAACTGGGGACGCA
GAGAAGGAGAACGGGCCTGGAACGCAGAGCTCGGCCGGGGGCTCAACTCAGCTGCCGGACGCGCATGCTGACAAT
GGGCGATTTCCAACCTCTAGCGGCGAATTCTCCGAGCATTGTGACAAGACCAGCTGCACATTGAAGAGCACCAGT
TATCAGTGCAAGTGCAACATTGGCCACAAGGCCTGGAGGGTCTCTGCCGTTGATCTCAGTACGTCGCCCCGACGA
CACTTGATATTGAGGGCTTGGTCATCCCGCTGACCGGCGAGATGAGATTCCAGACGAGGTGGTCTCCAACAAGAA
CGGCTTCCTGCTATGCTACGGCTTAGAAGGGGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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