Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9178
Gene name
LocationContig_65:8988..9540
Strand+
Gene length (bp)552
Transcript length (bp)552
Coding sequence length (bp)552
Protein length (aa) 184

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1747 0.0922 0.8447 0.2885 0.2324 0.0365 0.2391 0.2062 0.1917 0.0059

SignalP

SignalP signal predicted Location Score
Yes 1 - 14 0.589531

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup171
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2453
Ophiocordyceps australis 1348a (Ghana) OphauG2|5209
Ophiocordyceps australis 1348a (Ghana) OphauG2|6873
Ophiocordyceps australis map64 (Brazil) OphauB2|6831
Ophiocordyceps australis map64 (Brazil) OphauB2|7159
Ophiocordyceps kimflemingae Ophio5|5336
Ophiocordyceps kimflemingae Ophio5|7312
Ophiocordyceps subramaniannii Hirsu2|186
Ophiocordyceps subramaniannii Hirsu2|260
Ophiocordyceps subramaniannii Hirsu2|2751
Ophiocordyceps subramaniannii Hirsu2|9178 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9178
MLLAVLATLPQALALCRSMGRYRSDGIFFPAEPELEVLAEEQERRGEYRFSKYVKEECRWEGEAPGCGTTDRQLG
DVDNGWVFVAHTKYSQYSDICINNMHDLYHGQECCESYGAFCWSGFKRLWCKKTHVRRRKDRQDVAQPGDPGPTD
IKNYYDSGQNKRKSEGEATRLPAARKKKTHQPY*
Coding >Hirsu2|9178
ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC
GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC
AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA
GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG
CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG
TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT
ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA
AAGAAAAAAACACACCAGCCATATTGA
Transcript >Hirsu2|9178
ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC
GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC
AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA
GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG
CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG
TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT
ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA
AAGAAAAAAACACACCAGCCATATTGA
Gene >Hirsu2|9178
ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC
GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC
AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA
GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG
CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG
TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT
ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA
AAGAAAAAAACACACCAGCCATATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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