Protein ID | Hirsu2|9178 |
Gene name | |
Location | Contig_65:8988..9540 |
Strand | + |
Gene length (bp) | 552 |
Transcript length (bp) | 552 |
Coding sequence length (bp) | 552 |
Protein length (aa) | 184 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1747 | 0.0922 | 0.8447 | 0.2885 | 0.2324 | 0.0365 | 0.2391 | 0.2062 | 0.1917 | 0.0059 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 14 | 0.589531 |
Orthofinder run ID | 4 |
Orthogroup | 171 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9178 MLLAVLATLPQALALCRSMGRYRSDGIFFPAEPELEVLAEEQERRGEYRFSKYVKEECRWEGEAPGCGTTDRQLG DVDNGWVFVAHTKYSQYSDICINNMHDLYHGQECCESYGAFCWSGFKRLWCKKTHVRRRKDRQDVAQPGDPGPTD IKNYYDSGQNKRKSEGEATRLPAARKKKTHQPY* |
Coding | >Hirsu2|9178 ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA AAGAAAAAAACACACCAGCCATATTGA |
Transcript | >Hirsu2|9178 ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA AAGAAAAAAACACACCAGCCATATTGA |
Gene | >Hirsu2|9178 ATGCTCCTGGCAGTCCTCGCCACCCTCCCGCAAGCTCTTGCCCTTTGCCGCAGCATGGGGCGATACCGGAGCGAC GGCATCTTCTTCCCAGCAGAGCCAGAGCTGGAGGTCCTCGCAGAGGAGCAGGAGAGGCGCGGAGAGTATCGCTTC AGCAAATACGTCAAGGAAGAATGCCGATGGGAGGGAGAGGCGCCCGGGTGCGGAACTACCGATCGGCAGCTCGGA GACGTCGACAACGGTTGGGTTTTTGTCGCCCATACCAAATATTCGCAGTATTCCGACATATGCATAAACAACATG CATGACCTGTACCACGGCCAGGAATGCTGCGAGTCCTACGGCGCGTTCTGCTGGTCGGGCTTCAAGAGGCTCTGG TGCAAAAAGACGCATGTTCGACGGAGGAAGGACAGACAAGACGTTGCGCAGCCTGGCGATCCCGGGCCAACCGAT ATCAAGAATTACTACGACAGCGGTCAAAACAAGAGGAAGTCGGAAGGCGAGGCCACGAGGCTACCAGCTGCACGA AAGAAAAAAACACACCAGCCATATTGA |