Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9170
Gene name
LocationContig_649:4..211
Strand+
Gene length (bp)207
Transcript length (bp)207
Coding sequence length (bp)207
Protein length (aa) 69

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5991 0.6009 0.0911 0.0732 0.3234 0.0401 0.1607 0.2795 0.256 0.139

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup484
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1871
Ophiocordyceps australis map64 (Brazil) OphauB2|7347
Ophiocordyceps camponoti-floridani Ophcf2|05776
Ophiocordyceps camponoti-rufipedis Ophun1|1148
Ophiocordyceps kimflemingae Ophio5|5242
Ophiocordyceps subramaniannii Hirsu2|10824
Ophiocordyceps subramaniannii Hirsu2|8429
Ophiocordyceps subramaniannii Hirsu2|9170 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9170
LSGSVQVQFADPLVRQEDVPQVPRLPDDAWDRETLESFDMIIVTMRQVGLDFGLMRHLRDVEVEWWCV*
Coding >Hirsu2|9170
CTGTCCGGCAGCGTCCAGGTCCAGTTCGCCGACCCGCTGGTGCGGCAGGAGGATGTGCCGCAGGTGCCGCGGCTG
CCCGACGATGCCTGGGACCGCGAGACGCTCGAGTCGTTCGACATGATCATCGTCACCATGCGTCAGGTAGGACTC
GACTTTGGCCTCATGCGCCACCTCCGGGACGTCGAGGTCGAGTGGTGGTGCGTGTGA
Transcript >Hirsu2|9170
CTGTCCGGCAGCGTCCAGGTCCAGTTCGCCGACCCGCTGGTGCGGCAGGAGGATGTGCCGCAGGTGCCGCGGCTG
CCCGACGATGCCTGGGACCGCGAGACGCTCGAGTCGTTCGACATGATCATCGTCACCATGCGTCAGGTAGGACTC
GACTTTGGCCTCATGCGCCACCTCCGGGACGTCGAGGTCGAGTGGTGGTGCGTGTGA
Gene >Hirsu2|9170
CTGTCCGGCAGCGTCCAGGTCCAGTTCGCCGACCCGCTGGTGCGGCAGGAGGATGTGCCGCAGGTGCCGCGGCTG
CCCGACGATGCCTGGGACCGCGAGACGCTCGAGTCGTTCGACATGATCATCGTCACCATGCGTCAGGTAGGACTC
GACTTTGGCCTCATGCGCCACCTCCGGGACGTCGAGGTCGAGTGGTGGTGCGTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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