Protein ID | Hirsu2|9166 |
Gene name | |
Location | Contig_648:5259..7502 |
Strand | - |
Gene length (bp) | 2243 |
Transcript length (bp) | 2184 |
Coding sequence length (bp) | 2184 |
Protein length (aa) | 728 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00498 | FHA | FHA domain | 7.1E-17 | 154 | 231 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 129 | 251 | 1.0E-29 |
sp|Q03944|VPS64_YEAST | Vacuolar protein sorting-associated protein 64 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1 SV=1 | 123 | 265 | 2.0E-21 |
sp|Q06001|FAR10_YEAST | Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAR10 PE=1 SV=1 | 129 | 252 | 1.0E-19 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 148 | 251 | 6.0E-14 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 148 | 251 | 7.0E-14 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74388|YNVD_SCHPO | Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1 | 129 | 251 | 1.0E-29 |
sp|Q03944|VPS64_YEAST | Vacuolar protein sorting-associated protein 64 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1 SV=1 | 123 | 265 | 2.0E-21 |
sp|Q06001|FAR10_YEAST | Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAR10 PE=1 SV=1 | 129 | 252 | 1.0E-19 |
sp|P0C219|SLMAP_RAT | Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=1 SV=1 | 148 | 251 | 6.0E-14 |
sp|Q28623|SLMAP_RABIT | Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2 | 148 | 251 | 7.0E-14 |
sp|Q14BN4|SLMAP_HUMAN | Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1 | 148 | 251 | 9.0E-14 |
sp|Q3URD3|SLMAP_MOUSE | Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap PE=1 SV=2 | 148 | 251 | 4.0E-13 |
sp|Q10322|DMA1_SCHPO | Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 | 153 | 233 | 6.0E-09 |
sp|P38823|DMA1_YEAST | E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1 | 172 | 252 | 3.0E-07 |
sp|A6ZRW7|DMA2_YEAS7 | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DMA2 PE=3 SV=1 | 172 | 234 | 4.0E-07 |
sp|P53924|DMA2_YEAST | E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1 | 172 | 234 | 5.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | 0.3544 | 0.3602 | 0.0504 | 0.1942 | 0.2933 | 0.0115 | 0.4461 | 0.1001 | 0.3162 | 0.0196 |
Orthofinder run ID | 4 |
Orthogroup | 4424 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9166 MNPDEVRGMFAPRKQLARTNSSSSISSSSSSTTVATNGSQSNGTSLSAGSDLSQWPGNAGPRKRPQPKNPWPLGK ADVSSDFSRMPAGRPNSMVPHHNPLQPGPGQPQMAQQTAMRPMASEQFSPGQPVLYLLSLNGTFERKTIAVPFAP DSLRIGRQTNQKTVPTPTNGFFDSKVLSRQHAEIYAERNGKIYIRDVKSSNGTFVNGTRLSQENRESEPHELQTA DHLELGIDIVSEDQKTVVHHKVAAKVEHAGFLSNTNNVLDMNFGDLDPANGTMMVPNGPLQMRGRAGSNASVGNN GGRMMPNAGAMGSHINGMAPQRPFFLSPIATDQILKRLASEMRNARVQAQDLNRTKHFINTLLSKDDIKDLEKPD VPEPSKAQPMVNGAPGISFRSDPKARFSDPPAPPPQQPLPEKPDVPSLKRGSVDRPKSGPPNPAPVRQENVNQII QLTEALNNAKRDMDSQTARMRELETMLQREREARELAEDVARRLEETANAAQANGSSPGAAHAPADVAPEPLPDD DDTVVVVAAESGAADDAAEADAAHEAAAHLQSRIDAMDEQMRSLREQVETWKQRCESAETERDEGRRTLADMVVQ LRAEEARRASSRARRRSRSRRSRSGQRETGSSEVRAPGADGTGPGPSKKRAGDEVEDEGETEDGPTISRASTATP GTSAEGAPGRSAGDLVQAGLPYASMLSVVLIGMGLMVYINGWQTPPPPPLER* |
Coding | >Hirsu2|9166 ATGAACCCCGACGAAGTCAGAGGCATGTTCGCGCCTCGCAAGCAGCTCGCGCGGACGAACTCGTCGTCGTCCATC TCGTCGAGCTCCTCCAGCACCACCGTCGCCACCAACGGCTCGCAATCCAATGGCACCTCGCTATCTGCCGGCTCG GATCTGAGTCAATGGCCGGGCAACGCGGGGCCTCGGAAGCGTCCACAGCCTAAGAACCCGTGGCCGCTCGGCAAG GCCGACGTGTCGTCCGACTTCTCGAGGATGCCGGCCGGACGCCCCAACAGCATGGTGCCCCATCACAACCCTCTG CAGCCGGGCCCCGGCCAGCCGCAGATGGCGCAGCAGACGGCCATGAGGCCGATGGCGTCGGAGCAGTTTTCCCCC GGCCAGCCCGTCCTCTACCTGCTCTCGCTCAACGGCACCTTTGAGCGAAAGACCATCGCCGTCCCCTTCGCCCCC GACAGCCTGCGGATCGGCCGCCAGACCAACCAGAAGACGGTCCCGACGCCGACCAACGGCTTCTTCGACAGTAAA GTGCTGTCGAGGCAGCACGCCGAGATTTACGCCGAGCGCAACGGCAAGATCTACATCCGCGACGTCAAGTCGTCC AACGGCACCTTTGTCAACGGCACCCGCCTGTCGCAGGAAAATAGGGAGTCCGAGCCGCACGAGCTGCAGACGGCT GACCATCTCGAGCTGGGCATCGACATCGTCAGCGAGGACCAGAAGACGGTCGTCCACCACAAGGTGGCCGCCAAG GTCGAGCATGCCGGCTTCTTGAGCAACACCAACAACGTGCTGGACATGAACTTTGGCGACCTGGACCCGGCCAAC GGCACCATGATGGTCCCCAACGGGCCGCTCCAGATGCGTGGCAGGGCGGGCAGCAACGCGTCCGTGGGCAACAAC GGCGGCCGCATGATGCCCAACGCCGGGGCCATGGGCTCACATATTAACGGCATGGCGCCGCAACGGCCCTTTTTC CTCTCACCCATCGCCACGGACCAGATCCTCAAGCGGCTGGCGAGCGAGATGCGCAATGCCCGGGTGCAGGCCCAG GACCTGAACCGCACCAAGCACTTCATCAACACGCTGCTGTCCAAGGACGACATCAAGGACCTTGAAAAGCCCGAC GTCCCGGAGCCGTCGAAAGCGCAGCCGATGGTTAATGGCGCCCCCGGCATCTCCTTCCGATCCGATCCCAAAGCT CGCTTCTCCGATCCGCCCGCTCCCCCCCCGCAGCAGCCTCTCCCCGAAAAGCCCGACGTGCCGTCGCTCAAGCGG GGATCGGTCGATCGGCCGAAATCCGGGCCGCCCAACCCTGCGCCGGTCCGCCAGGAGAACGTGAACCAGATCATC CAGCTGACGGAGGCGCTGAACAATGCCAAGCGAGACATGGACAGCCAAACGGCCCGCATGCGCGAGCTGGAAACG ATGCTGCAGAGGGAGCGGGAAGCGCGCGAGCTGGCCGAAGACGTTGCCAGGCGCCTCGAGGAGACGGCCAACGCC GCCCAGGCTAACGGCTCGTCGCCGGGAGCAGCCCACGCACCGGCCGACGTCGCGCCGGAACCGCTGCCGGACGAT GACGATACAGTGGTCGTGGTGGCCGCGGAGTCGGGTGCGGCCGATGACGCGGCCGAGGCAGACGCCGCCCACGAA GCGGCCGCCCACCTGCAGTCACGCATCGACGCTATGGACGAACAGATGCGCAGCCTCCGAGAGCAGGTGGAGACG TGGAAGCAGCGGTGCGAGTCGGCCGAGACGGAGCGCGACGAAGGGCGGCGAACGCTGGCCGACATGGTGGTGCAG CTCAGGGCCGAGGAGGCCAGACGAGCGTCGTCGCGGGCGAGGCGGCGCTCCCGGTCGAGGAGGAGCCGGTCCGGC CAACGCGAGACGGGCAGCTCGGAGGTCAGGGCGCCGGGAGCGGACGGCACGGGGCCCGGGCCCAGCAAGAAGCGG GCCGGTGACGAGGTCGAGGACGAGGGCGAGACCGAGGACGGCCCGACGATATCGAGAGCCAGCACGGCGACGCCG GGCACGTCGGCGGAAGGCGCACCGGGGCGAAGCGCAGGCGACTTGGTGCAGGCCGGCCTGCCATACGCATCGATG CTCAGCGTGGTGCTCATCGGCATGGGCTTGATGGTTTACATAAACGGCTGGCAGACTCCTCCGCCGCCGCCGCTA GAAAGATGA |
Transcript | >Hirsu2|9166 ATGAACCCCGACGAAGTCAGAGGCATGTTCGCGCCTCGCAAGCAGCTCGCGCGGACGAACTCGTCGTCGTCCATC TCGTCGAGCTCCTCCAGCACCACCGTCGCCACCAACGGCTCGCAATCCAATGGCACCTCGCTATCTGCCGGCTCG GATCTGAGTCAATGGCCGGGCAACGCGGGGCCTCGGAAGCGTCCACAGCCTAAGAACCCGTGGCCGCTCGGCAAG GCCGACGTGTCGTCCGACTTCTCGAGGATGCCGGCCGGACGCCCCAACAGCATGGTGCCCCATCACAACCCTCTG CAGCCGGGCCCCGGCCAGCCGCAGATGGCGCAGCAGACGGCCATGAGGCCGATGGCGTCGGAGCAGTTTTCCCCC GGCCAGCCCGTCCTCTACCTGCTCTCGCTCAACGGCACCTTTGAGCGAAAGACCATCGCCGTCCCCTTCGCCCCC GACAGCCTGCGGATCGGCCGCCAGACCAACCAGAAGACGGTCCCGACGCCGACCAACGGCTTCTTCGACAGTAAA GTGCTGTCGAGGCAGCACGCCGAGATTTACGCCGAGCGCAACGGCAAGATCTACATCCGCGACGTCAAGTCGTCC AACGGCACCTTTGTCAACGGCACCCGCCTGTCGCAGGAAAATAGGGAGTCCGAGCCGCACGAGCTGCAGACGGCT GACCATCTCGAGCTGGGCATCGACATCGTCAGCGAGGACCAGAAGACGGTCGTCCACCACAAGGTGGCCGCCAAG GTCGAGCATGCCGGCTTCTTGAGCAACACCAACAACGTGCTGGACATGAACTTTGGCGACCTGGACCCGGCCAAC GGCACCATGATGGTCCCCAACGGGCCGCTCCAGATGCGTGGCAGGGCGGGCAGCAACGCGTCCGTGGGCAACAAC GGCGGCCGCATGATGCCCAACGCCGGGGCCATGGGCTCACATATTAACGGCATGGCGCCGCAACGGCCCTTTTTC CTCTCACCCATCGCCACGGACCAGATCCTCAAGCGGCTGGCGAGCGAGATGCGCAATGCCCGGGTGCAGGCCCAG GACCTGAACCGCACCAAGCACTTCATCAACACGCTGCTGTCCAAGGACGACATCAAGGACCTTGAAAAGCCCGAC GTCCCGGAGCCGTCGAAAGCGCAGCCGATGGTTAATGGCGCCCCCGGCATCTCCTTCCGATCCGATCCCAAAGCT CGCTTCTCCGATCCGCCCGCTCCCCCCCCGCAGCAGCCTCTCCCCGAAAAGCCCGACGTGCCGTCGCTCAAGCGG GGATCGGTCGATCGGCCGAAATCCGGGCCGCCCAACCCTGCGCCGGTCCGCCAGGAGAACGTGAACCAGATCATC CAGCTGACGGAGGCGCTGAACAATGCCAAGCGAGACATGGACAGCCAAACGGCCCGCATGCGCGAGCTGGAAACG ATGCTGCAGAGGGAGCGGGAAGCGCGCGAGCTGGCCGAAGACGTTGCCAGGCGCCTCGAGGAGACGGCCAACGCC GCCCAGGCTAACGGCTCGTCGCCGGGAGCAGCCCACGCACCGGCCGACGTCGCGCCGGAACCGCTGCCGGACGAT GACGATACAGTGGTCGTGGTGGCCGCGGAGTCGGGTGCGGCCGATGACGCGGCCGAGGCAGACGCCGCCCACGAA GCGGCCGCCCACCTGCAGTCACGCATCGACGCTATGGACGAACAGATGCGCAGCCTCCGAGAGCAGGTGGAGACG TGGAAGCAGCGGTGCGAGTCGGCCGAGACGGAGCGCGACGAAGGGCGGCGAACGCTGGCCGACATGGTGGTGCAG CTCAGGGCCGAGGAGGCCAGACGAGCGTCGTCGCGGGCGAGGCGGCGCTCCCGGTCGAGGAGGAGCCGGTCCGGC CAACGCGAGACGGGCAGCTCGGAGGTCAGGGCGCCGGGAGCGGACGGCACGGGGCCCGGGCCCAGCAAGAAGCGG GCCGGTGACGAGGTCGAGGACGAGGGCGAGACCGAGGACGGCCCGACGATATCGAGAGCCAGCACGGCGACGCCG GGCACGTCGGCGGAAGGCGCACCGGGGCGAAGCGCAGGCGACTTGGTGCAGGCCGGCCTGCCATACGCATCGATG CTCAGCGTGGTGCTCATCGGCATGGGCTTGATGGTTTACATAAACGGCTGGCAGACTCCTCCGCCGCCGCCGCTA GAAAGATGA |
Gene | >Hirsu2|9166 ATGAACCCCGACGAAGTCAGAGGCATGTTCGCGCCTCGCAAGCAGCTCGCGCGGACGAACTCGTCGTCGTCCATC TCGTCGAGCTCCTCCAGCACCACCGTCGCCACCAACGGCTCGCAATCCAATGGCACCTCGCTATCTGCCGGCTCG GATCTGAGTCAATGGCCGGGCAACGCGGGGCCTCGGAAGCGTCCACAGCCTAAGAACCCGTGGCCGCTCGGCAAG GCCGACGTGTCGTCCGACTTCTCGAGGATGCCGGCCGGACGCCCCAACAGCATGGTGCCCCATCACAACCCTCTG CAGCCGGGCCCCGGCCAGCCGCAGATGGCGCAGCAGACGGCCATGAGGCCGATGGCGTCGGAGCAGTTTTCCCCC GGCCAGCCCGTCCTCTACCTGCTCTCGCTCAACGGCACCTTTGAGCGAAAGACCATCGCCGTCCCCTTCGCCCCC GACAGCCTGCGGATCGGCCGCCAGACCAACCAGAAGACGGTCCCGACGCCGACCAACGGCTTCTTCGACAGTAAA GTGCTGTCGAGGCAGCACGCCGAGATTTACGCCGAGCGCAACGGCAAGATCTACATCCGCGACGTCAAGTCGTCC AACGGCACCTTTGTCAACGGCACCCGCCTGTCGCAGGAAAATAGGGAGTCCGAGCCGCACGAGCTGCAGACGGCT GACCATCTCGAGCTGGGCATCGACATCGTCAGCGAGGACCAGAAGACGGTCGTCCACCACAAGGTGGCCGCCAAG GTCGAGCATGCCGGCTTCTTGAGCAACACCAACAACGTGCTGGACATGAACTTTGGCGACCTGGACCCGGCCAAC GGCACCATGATGGTCCCCAACGGGCCGCTCCAGATGCGTGGCAGGGCGGGCAGCAACGCGTCCGTGGGCAACAAC GGCGGCCGCATGATGCCCAACGCCGGGGCCATGGGCTCACATATTAACGGCATGGCGCCGCAACGGCCCTTTTTC CTCTCACCCATCGCCACGGACCAGATCCTCAAGCGGCTGGCGGTAAGTGCTTGGGCTCTGCGGTCGACGCCTACG CCCCGACAGATTCTGACGCGAACCAGAGCGAGATGCGCAATGCCCGGGTGCAGGCCCAGGACCTGAACCGCACCA AGCACTTCATCAACACGCTGCTGTCCAAGGACGACATCAAGGACCTTGAAAAGCCCGACGTCCCGGAGCCGTCGA AAGCGCAGCCGATGGTTAATGGCGCCCCCGGCATCTCCTTCCGATCCGATCCCAAAGCTCGCTTCTCCGATCCGC CCGCTCCCCCCCCGCAGCAGCCTCTCCCCGAAAAGCCCGACGTGCCGTCGCTCAAGCGGGGATCGGTCGATCGGC CGAAATCCGGGCCGCCCAACCCTGCGCCGGTCCGCCAGGAGAACGTGAACCAGATCATCCAGCTGACGGAGGCGC TGAACAATGCCAAGCGAGACATGGACAGCCAAACGGCCCGCATGCGCGAGCTGGAAACGATGCTGCAGAGGGAGC GGGAAGCGCGCGAGCTGGCCGAAGACGTTGCCAGGCGCCTCGAGGAGACGGCCAACGCCGCCCAGGCTAACGGCT CGTCGCCGGGAGCAGCCCACGCACCGGCCGACGTCGCGCCGGAACCGCTGCCGGACGATGACGATACAGTGGTCG TGGTGGCCGCGGAGTCGGGTGCGGCCGATGACGCGGCCGAGGCAGACGCCGCCCACGAAGCGGCCGCCCACCTGC AGTCACGCATCGACGCTATGGACGAACAGATGCGCAGCCTCCGAGAGCAGGTGGAGACGTGGAAGCAGCGGTGCG AGTCGGCCGAGACGGAGCGCGACGAAGGGCGGCGAACGCTGGCCGACATGGTGGTGCAGCTCAGGGCCGAGGAGG CCAGACGAGCGTCGTCGCGGGCGAGGCGGCGCTCCCGGTCGAGGAGGAGCCGGTCCGGCCAACGCGAGACGGGCA GCTCGGAGGTCAGGGCGCCGGGAGCGGACGGCACGGGGCCCGGGCCCAGCAAGAAGCGGGCCGGTGACGAGGTCG AGGACGAGGGCGAGACCGAGGACGGCCCGACGATATCGAGAGCCAGCACGGCGACGCCGGGCACGTCGGCGGAAG GCGCACCGGGGCGAAGCGCAGGCGACTTGGTGCAGGCCGGCCTGCCATACGCATCGATGCTCAGCGTGGTGCTCA TCGGCATGGGCTTGATGGTTTACATAAACGGCTGGCAGACTCCTCCGCCGCCGCCGCTAGAAAGATGA |