© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9160 |
| Gene name | |
| Location | Contig_647:8341..8818 |
| Strand | - |
| Gene length (bp) | 477 |
| Transcript length (bp) | 366 |
| Coding sequence length (bp) | 366 |
| Protein length (aa) | 122 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00111 | Fer2 | 2Fe-2S iron-sulfur cluster binding domain | 2.9E-15 | 15 | 98 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12184|ADRX_YEAST | Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAH1 PE=1 SV=1 | 3 | 121 | 4.0E-58 |
| sp|Q8S904|MFDX2_ARATH | Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1 | 7 | 120 | 2.0E-43 |
| sp|Q9M0V0|MFDX1_ARATH | Adrenodoxin-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=MFDX1 PE=1 SV=1 | 7 | 120 | 4.0E-40 |
| sp|Q9AKM6|FER2_RICMO | 2Fe-2S ferredoxin OS=Rickettsia montanensis GN=fdxB PE=3 SV=1 | 8 | 116 | 2.0E-38 |
| sp|Q92J08|FER2_RICCN | 2Fe-2S ferredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=fdxB PE=3 SV=1 | 8 | 116 | 8.0E-38 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12184|ADRX_YEAST | Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAH1 PE=1 SV=1 | 3 | 121 | 4.0E-58 |
| sp|Q8S904|MFDX2_ARATH | Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1 | 7 | 120 | 2.0E-43 |
| sp|Q9M0V0|MFDX1_ARATH | Adrenodoxin-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=MFDX1 PE=1 SV=1 | 7 | 120 | 4.0E-40 |
| sp|Q9AKM6|FER2_RICMO | 2Fe-2S ferredoxin OS=Rickettsia montanensis GN=fdxB PE=3 SV=1 | 8 | 116 | 2.0E-38 |
| sp|Q92J08|FER2_RICCN | 2Fe-2S ferredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=fdxB PE=3 SV=1 | 8 | 116 | 8.0E-38 |
| sp|Q4UKL2|FER2_RICFE | 2Fe-2S ferredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=fdxB PE=3 SV=1 | 8 | 116 | 8.0E-38 |
| sp|Q9AKH1|FER2_RICRI | 2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1 | 8 | 116 | 2.0E-37 |
| sp|Q9ZDW6|FER2_RICPR | 2Fe-2S ferredoxin OS=Rickettsia prowazekii (strain Madrid E) GN=fdxB PE=3 SV=1 | 8 | 116 | 8.0E-37 |
| sp|Q9AKC4|FER2_RICTY | 2Fe-2S ferredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=fdxB PE=3 SV=1 | 8 | 121 | 9.0E-37 |
| sp|Q1RJ69|FER2_RICBR | 2Fe-2S ferredoxin OS=Rickettsia bellii (strain RML369-C) GN=fdxB PE=3 SV=1 | 9 | 116 | 2.0E-32 |
| sp|Q6P4F2|ADXL_HUMAN | Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L PE=1 SV=1 | 2 | 115 | 2.0E-30 |
| sp|Q05B51|ADXL_BOVIN | Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2 SV=1 | 2 | 115 | 3.0E-30 |
| sp|Q08C57|ADXL_DANRE | Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l PE=2 SV=1 | 9 | 115 | 7.0E-30 |
| sp|Q10361|ETP1_SCHPO | Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=etp1 PE=1 SV=2 | 3 | 116 | 2.0E-29 |
| sp|Q9CPW2|ADXL_MOUSE | Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l PE=1 SV=1 | 2 | 115 | 9.0E-29 |
| sp|Q5FWQ0|ADXL_XENLA | Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l PE=2 SV=1 | 7 | 115 | 4.0E-28 |
| sp|P37193|ADXH_DROME | Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster GN=Fdxh PE=2 SV=3 | 2 | 115 | 7.0E-28 |
| sp|P29330|ADX_SHEEP | Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2 | 7 | 118 | 5.0E-26 |
| sp|P10109|ADX_HUMAN | Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1 | 7 | 118 | 6.0E-26 |
| sp|P46656|ADX_MOUSE | Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1 PE=1 SV=1 | 7 | 118 | 2.0E-25 |
| sp|P00257|ADX_BOVIN | Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 PE=1 SV=2 | 7 | 109 | 2.0E-25 |
| sp|P00258|ADX_PIG | Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 PE=1 SV=2 | 7 | 109 | 2.0E-25 |
| sp|P24483|ADX_RAT | Adrenodoxin, mitochondrial OS=Rattus norvegicus GN=Fdx1 PE=2 SV=1 | 7 | 118 | 3.0E-25 |
| sp|Q8SV19|ADRX_ENCCU | Adrenodoxin homolog OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU07_0600 PE=3 SV=1 | 28 | 121 | 4.0E-25 |
| sp|P13216|ADX_CHICK | Adrenodoxin, mitochondrial (Fragment) OS=Gallus gallus GN=FDX1 PE=1 SV=1 | 7 | 118 | 6.0E-25 |
| sp|P80306|FER6_RHOCA | Ferredoxin-6 OS=Rhodobacter capsulatus GN=fdxE PE=1 SV=2 | 11 | 109 | 8.0E-20 |
| sp|P37098|FER2_CAUCR | 2Fe-2S ferredoxin OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=fdxB PE=3 SV=1 | 11 | 109 | 4.0E-19 |
| sp|P0A9R6|FER_SHIFL | 2Fe-2S ferredoxin OS=Shigella flexneri GN=fdx PE=3 SV=2 | 23 | 114 | 1.0E-18 |
| sp|P0A9R4|FER_ECOLI | 2Fe-2S ferredoxin OS=Escherichia coli (strain K12) GN=fdx PE=1 SV=2 | 23 | 114 | 1.0E-18 |
| sp|P0A9R5|FER_ECO57 | 2Fe-2S ferredoxin OS=Escherichia coli O157:H7 GN=fdx PE=3 SV=2 | 23 | 114 | 1.0E-18 |
| sp|P00259|PUTX_PSEPU | Putidaredoxin OS=Pseudomonas putida GN=camB PE=1 SV=3 | 11 | 109 | 2.0E-17 |
| sp|P44428|FER_HAEIN | 2Fe-2S ferredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fdx PE=3 SV=2 | 24 | 114 | 4.0E-17 |
| sp|P43493|THCC_RHOER | Rhodocoxin OS=Rhodococcus erythropolis GN=thcC PE=1 SV=2 | 11 | 109 | 3.0E-16 |
| sp|Q51383|FER_PSEAE | 2Fe-2S ferredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=fdx PE=3 SV=2 | 23 | 114 | 4.0E-16 |
| sp|P33007|TERPB_PSESP | Terpredoxin OS=Pseudomonas sp. GN=terPB PE=1 SV=2 | 10 | 109 | 1.0E-14 |
| sp|O51882|FER_BUCAP | 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=fdx PE=3 SV=1 | 23 | 114 | 7.0E-14 |
| sp|D5IGG4|CARAC_SPHSX | Ferredoxin CarAc OS=Sphingomonas sp. GN=carAc PE=1 SV=1 | 8 | 109 | 8.0E-13 |
| sp|Q89A15|FER_BUCBP | 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=fdx PE=3 SV=1 | 23 | 114 | 3.0E-12 |
| sp|P57661|FER_BUCAI | 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=fdx PE=3 SV=1 | 24 | 100 | 1.0E-11 |
| sp|P59799|FER5_AQUAE | 2Fe-2S ferredoxin-5 OS=Aquifex aeolicus (strain VF5) GN=fdx5 PE=1 SV=2 | 22 | 109 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051536 | iron-sulfur cluster binding | Yes |
| GO:0009055 | electron transfer activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0048037 | cofactor binding | No |
| GO:0051540 | metal cluster binding | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9160 MPPKPGEELHVTFVDKDGQEYKFEVAEGDNLLDIAQANDLEMEGACGGSCACSTCHVIVADESYYDKMPEPEDDE NDMLDLAFGLTETSRLGCQVKMTKDLDGLVVKLPSMTRNMQASDFQ* |
| Coding | >Hirsu2|9160 ATGCCGCCCAAGCCCGGGGAAGAGCTCCATGTCACCTTTGTCGACAAGGACGGCCAAGAGTACAAGTTCGAAGTC GCCGAGGGCGACAACCTGCTAGACATTGCCCAGGCCAACGACTTGGAAATGGAGGGCGCGTGCGGCGGGTCCTGC GCGTGCTCGACATGCCATGTCATCGTCGCGGACGAGTCCTACTACGACAAGATGCCCGAGCCCGAAGACGACGAG AACGACATGTTGGACCTGGCTTTTGGCCTGACGGAGACGAGCCGCCTGGGCTGCCAGGTGAAGATGACCAAGGAC CTCGACGGCCTCGTCGTCAAGCTTCCCTCGATGACGAGAAATATGCAGGCCAGTGACTTCCAATGA |
| Transcript | >Hirsu2|9160 ATGCCGCCCAAGCCCGGGGAAGAGCTCCATGTCACCTTTGTCGACAAGGACGGCCAAGAGTACAAGTTCGAAGTC GCCGAGGGCGACAACCTGCTAGACATTGCCCAGGCCAACGACTTGGAAATGGAGGGCGCGTGCGGCGGGTCCTGC GCGTGCTCGACATGCCATGTCATCGTCGCGGACGAGTCCTACTACGACAAGATGCCCGAGCCCGAAGACGACGAG AACGACATGTTGGACCTGGCTTTTGGCCTGACGGAGACGAGCCGCCTGGGCTGCCAGGTGAAGATGACCAAGGAC CTCGACGGCCTCGTCGTCAAGCTTCCCTCGATGACGAGAAATATGCAGGCCAGTGACTTCCAATGA |
| Gene | >Hirsu2|9160 ATGGTCCGCGCGCCACTTGACGACCACGGCGCCACAACGTCATGGGCACGTCCAGCCGCCCAAGCCCGGGGAAGA GTAAGTCCTCGACGGGCTGGCCGGCTTCGGCTTTCCACCTGCTGACGAGCGCCGCGCAGGCTCCATGTCACCTTT GTCGACAAGGACGGCCAAGAGTACAAGTTCGAAGTCGCCGAGGGCGACAACCTGCTAGACATTGCCCAGGCCAAC GACTTGGAAATGGAGGGCGCGTGCGGCGGGTCCTGCGCGTGCTCGACATGCCATGTCATCGTCGCGGACGAGTCC TACTACGACAAGATGCCCGAGCCCGAAGACGACGAGAACGACATGTTGGACCTGGCTTTTGGCCTGACGGAGACG AGCCGCCTGGGCTGCCAGGTGAAGATGACCAAGGACCTCGACGGCCTCGTCGTCAAGCTTCCCTCGATGACGAGA AATATGCAGGCCAGTGACTTCCAATGA |