Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|916
Gene name
LocationContig_1190:7649..8154
Strand+
Gene length (bp)505
Transcript length (bp)393
Coding sequence length (bp)393
Protein length (aa) 131

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q00371|CAP22_COLGL Protein CAP22 OS=Colletotrichum gloeosporioides GN=CAP22 PE=2 SV=1 4 101 4.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|916
MPAKSSVTALAVLAAVPLFVSAQNQNNRSNEVDIEMDDVPMPCRTICGPVVELARRCKTDLRGDNNDADEDRLEA
QCYCRNTSFDVGKISGLCADCMHKTVNQPGGGGNNNDDDDDNKARADADDKSTPS*
Coding >Hirsu2|916
ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG
AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC
GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC
CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG
GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT
AAATCGACACCGTCCTGA
Transcript >Hirsu2|916
ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG
AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC
GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC
CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG
GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT
AAATCGACACCGTCCTGA
Gene >Hirsu2|916
ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG
AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC
GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC
CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG
GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT
GTGGCGAGTAAGATGCCCCGGCTTCCTCGTCGATGCCGTTTGTGCTCGTCCTTGCACCTCGTCAACGCAGAGCAG
GTAGCGAGAGAGAGATTGCTAACAAAGTCCGGCCAAGAAATCGACACCGTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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