Protein ID | Hirsu2|916 |
Gene name | |
Location | Contig_1190:7649..8154 |
Strand | + |
Gene length (bp) | 505 |
Transcript length (bp) | 393 |
Coding sequence length (bp) | 393 |
Protein length (aa) | 131 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q00371|CAP22_COLGL | Protein CAP22 OS=Colletotrichum gloeosporioides GN=CAP22 PE=2 SV=1 | 4 | 101 | 4.0E-08 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0762 | 0.0475 | 0.957 | 0.1254 | 0.128 | 0.0234 | 0.2847 | 0.1426 | 0.2218 | 0.0071 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.999777 |
Orthofinder run ID | 4 |
Orthogroup | 4423 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|916 MPAKSSVTALAVLAAVPLFVSAQNQNNRSNEVDIEMDDVPMPCRTICGPVVELARRCKTDLRGDNNDADEDRLEA QCYCRNTSFDVGKISGLCADCMHKTVNQPGGGGNNNDDDDDNKARADADDKSTPS* |
Coding | >Hirsu2|916 ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT AAATCGACACCGTCCTGA |
Transcript | >Hirsu2|916 ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT AAATCGACACCGTCCTGA |
Gene | >Hirsu2|916 ATGCCAGCCAAGTCCTCCGTCACGGCCCTCGCCGTCCTGGCGGCCGTGCCGCTGTTCGTCTCGGCCCAGAACCAG AACAACCGGAGCAACGAGGTCGACATCGAGATGGACGACGTGCCGATGCCGTGCCGCACCATCTGCGGCCCCGTC GTCGAGCTCGCCCGCCGGTGCAAGACGGACCTGCGCGGCGACAACAACGACGCCGACGAAGACAGGCTTGAGGCC CAGTGCTACTGCAGGAACACGAGCTTCGACGTCGGCAAGATCAGCGGCCTCTGCGCCGACTGCATGCACAAGACG GTCAACCAGCCCGGCGGCGGCGGGAACAACAACGACGACGACGACGATAACAAGGCCCGGGCCGATGCCGATGAT GTGGCGAGTAAGATGCCCCGGCTTCCTCGTCGATGCCGTTTGTGCTCGTCCTTGCACCTCGTCAACGCAGAGCAG GTAGCGAGAGAGAGATTGCTAACAAAGTCCGGCCAAGAAATCGACACCGTCCTGA |