Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9157
Gene name
LocationContig_647:3240..4066
Strand-
Gene length (bp)826
Transcript length (bp)636
Coding sequence length (bp)636
Protein length (aa) 212

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 2.0E-47 22 204

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13770|YE98_SCHPO Uncharacterized membrane protein C17A5.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A5.08 PE=3 SV=1 1 209 4.0E-57
sp|Q12403|ERP3_YEAST Protein ERP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP3 PE=1 SV=1 20 211 4.0E-31
sp|Q12450|ERP4_YEAST Protein ERP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP4 PE=1 SV=1 27 211 1.0E-25
sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1 13 207 4.0E-25
sp|P39704|ERP2_YEAST Protein ERP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP2 PE=1 SV=1 1 211 5.0E-25
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Swissprot ID Swissprot Description Start End E-value
sp|O13770|YE98_SCHPO Uncharacterized membrane protein C17A5.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A5.08 PE=3 SV=1 1 209 4.0E-57
sp|Q12403|ERP3_YEAST Protein ERP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP3 PE=1 SV=1 20 211 4.0E-31
sp|Q12450|ERP4_YEAST Protein ERP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP4 PE=1 SV=1 27 211 1.0E-25
sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1 13 207 4.0E-25
sp|P39704|ERP2_YEAST Protein ERP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP2 PE=1 SV=1 1 211 5.0E-25
sp|O17528|TMED2_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1 14 204 3.0E-23
sp|Q9Y3B3|TMED7_HUMAN Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2 20 207 9.0E-22
sp|D3ZTX0|TMED7_RAT Transmembrane emp24 domain-containing protein 7 OS=Rattus norvegicus GN=Tmed7 PE=1 SV=1 23 207 3.0E-21
sp|Q54BN0|TMEDB_DICDI Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1 20 211 8.0E-21
sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1 28 207 6.0E-20
sp|Q63524|TMED2_RAT Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1 27 207 1.0E-19
sp|Q9R0Q3|TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1 27 207 1.0E-19
sp|Q15363|TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1 27 207 1.0E-19
sp|P49020|TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1 27 207 1.0E-19
sp|Q28BQ6|TMED1_XENTR Transmembrane emp24 domain-containing protein 1 OS=Xenopus tropicalis GN=tmed1 PE=2 SV=1 6 208 2.0E-17
sp|Q78IS1|TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 OS=Mus musculus GN=Tmed3 PE=1 SV=1 15 207 4.0E-16
sp|Q6AY25|TMED3_RAT Transmembrane emp24 domain-containing protein 3 OS=Rattus norvegicus GN=Tmed3 PE=1 SV=1 15 207 5.0E-16
sp|Q9Y3Q3|TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens GN=TMED3 PE=1 SV=1 23 207 5.0E-16
sp|Q9Y3A6|TMED5_HUMAN Transmembrane emp24 domain-containing protein 5 OS=Homo sapiens GN=TMED5 PE=1 SV=1 7 208 1.0E-14
sp|Q6AXN3|TMED5_RAT Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus GN=Tmed5 PE=2 SV=1 7 208 1.0E-14
sp|Q9CXE7|TMED5_MOUSE Transmembrane emp24 domain-containing protein 5 OS=Mus musculus GN=Tmed5 PE=1 SV=1 7 208 2.0E-14
sp|Q9I7K5|TMEDE_DROME Transmembrane emp24 domain-containing protein eca OS=Drosophila melanogaster GN=eca PE=2 SV=2 1 207 4.0E-14
sp|Q5R809|TMED5_PONAB Transmembrane emp24 domain-containing protein 5 OS=Pongo abelii GN=TMED5 PE=2 SV=1 7 208 4.0E-14
sp|B4QWH9|TMEDE_DROSI Transmembrane emp24 domain-containing protein eca OS=Drosophila simulans GN=eca PE=3 SV=1 1 207 6.0E-14
sp|B4HJV5|TMEDE_DROSE Transmembrane emp24 domain-containing protein eca OS=Drosophila sechellia GN=eca PE=3 SV=1 1 207 8.0E-14
sp|B3NZM5|TMEDE_DROER Transmembrane emp24 domain-containing protein eca OS=Drosophila erecta GN=eca PE=3 SV=1 1 207 3.0E-13
sp|B4PVC6|TMEDE_DROYA Transmembrane emp24 domain-containing protein eca OS=Drosophila yakuba GN=eca PE=3 SV=1 1 207 3.0E-13
sp|B4NKL0|TMEDE_DROWI Transmembrane emp24 domain-containing protein eca OS=Drosophila willistoni GN=eca PE=3 SV=1 1 207 5.0E-13
sp|B4KB41|TMEDE_DROMO Transmembrane emp24 domain-containing protein eca OS=Drosophila mojavensis GN=eca PE=3 SV=1 1 207 5.0E-13
sp|B4JG34|TMEDE_DROGR Transmembrane emp24 domain-containing protein eca OS=Drosophila grimshawi GN=eca PE=3 SV=1 1 207 5.0E-13
sp|B4LYB8|TMEDE_DROVI Transmembrane emp24 domain-containing protein eca OS=Drosophila virilis GN=eca PE=3 SV=1 1 207 1.0E-12
sp|Q2KJ84|TMED5_BOVIN Transmembrane emp24 domain-containing protein 5 OS=Bos taurus GN=TMED5 PE=2 SV=1 19 208 1.0E-12
sp|Q9BVK6|TMED9_HUMAN Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens GN=TMED9 PE=1 SV=2 10 207 3.0E-12
sp|B4GMC3|TMEDE_DROPE Transmembrane emp24 domain-containing protein eca OS=Drosophila persimilis GN=eca PE=3 SV=1 20 207 4.0E-12
sp|Q295B2|TMEDE_DROPS Transmembrane emp24 domain-containing protein eca OS=Drosophila pseudoobscura pseudoobscura GN=eca PE=3 SV=1 20 207 4.0E-12
sp|Q99KF1|TMED9_MOUSE Transmembrane emp24 domain-containing protein 9 OS=Mus musculus GN=Tmed9 PE=1 SV=2 20 207 8.0E-12
sp|Q5I0E7|TMED9_RAT Transmembrane emp24 domain-containing protein 9 OS=Rattus norvegicus GN=Tmed9 PE=1 SV=1 22 207 1.0E-11
sp|Q3T133|TMED9_BOVIN Transmembrane emp24 domain-containing protein 9 OS=Bos taurus GN=TMED9 PE=1 SV=1 22 207 1.0E-11
sp|B3MTS8|TMEDE_DROAN Transmembrane emp24 domain-containing protein eca OS=Drosophila ananassae GN=eca PE=3 SV=1 20 207 1.0E-11
sp|P32803|EMP24_YEAST Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP24 PE=1 SV=1 10 204 4.0E-11
sp|Q8R1V4|TMED4_MOUSE Transmembrane emp24 domain-containing protein 4 OS=Mus musculus GN=Tmed4 PE=1 SV=1 9 207 3.0E-10
sp|Q5R7E6|TMED1_PONAB Transmembrane emp24 domain-containing protein 1 OS=Pongo abelii GN=TMED1 PE=2 SV=1 24 113 4.0E-10
sp|Q13445|TMED1_HUMAN Transmembrane emp24 domain-containing protein 1 OS=Homo sapiens GN=TMED1 PE=1 SV=1 24 113 5.0E-10
sp|Q2TBK5|TMED1_BOVIN Transmembrane emp24 domain-containing protein 1 OS=Bos taurus GN=TMED1 PE=2 SV=1 24 113 6.0E-10
sp|Q3V009|TMED1_MOUSE Transmembrane emp24 domain-containing protein 1 OS=Mus musculus GN=Tmed1 PE=1 SV=1 24 113 7.0E-10
sp|Q5BK85|TMED1_RAT Transmembrane emp24 domain-containing protein 1 OS=Rattus norvegicus GN=Tmed1 PE=2 SV=1 24 113 8.0E-10
sp|Q9LIL4|P24B3_ARATH Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1 10 203 9.0E-10
sp|Q7Z7H5|TMED4_HUMAN Transmembrane emp24 domain-containing protein 4 OS=Homo sapiens GN=TMED4 PE=1 SV=1 20 207 1.0E-09
sp|Q9P7I9|EMP24_SCHPO Endosomal protein P24B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=emp24 PE=3 SV=1 8 207 6.0E-09
sp|Q9FVU0|P24D4_ARATH Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1 64 207 2.0E-08
sp|Q9S7M9|P24B2_ARATH Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana GN=At3g07680 PE=1 SV=1 34 204 6.0E-08
sp|Q6IDL4|P24D3_ARATH Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1 64 207 1.0E-07
sp|P38819|ERP5_YEAST Protein ERP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP5 PE=1 SV=1 6 203 1.0E-06
sp|Q6BTC2|TMEDA_DEBHA Endoplasmic reticulum vesicle protein 25 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ERV25 PE=3 SV=2 73 204 6.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum|Golgi apparatus Signal peptide|Transmembrane domain 0.0751 0.0443 0.0152 0.12 0.2318 0.1304 0.8813 0.2475 0.8137 0.0572

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999274

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 177 199 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4422
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6855
Ophiocordyceps australis map64 (Brazil) OphauB2|5982
Ophiocordyceps camponoti-floridani Ophcf2|05870
Ophiocordyceps camponoti-floridani Ophcf2|06451
Ophiocordyceps camponoti-floridani Ophcf2|07443
Ophiocordyceps kimflemingae Ophio5|5451
Ophiocordyceps subramaniannii Hirsu2|9157 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9157
MRLPTIAAGIIACLASNVVATALTYKVAAGEKACFYTDAKKENEKVAFYFAVQSGGSFDVDYLVEGPGGKIILEG
EKERQGDFVFTAQRTGEYSFCFDNEMSTFTEKMIDIEISSEHESRTAQLPSKQGTSPEQTSVLEESIFKISGQLS
TISRNQKYFRTRENRNFSTVNSTEKRIVNFSMIQIGLIVCMGALQVFIVRFFFQGARKGYV*
Coding >Hirsu2|9157
ATGAGACTGCCGACCATAGCAGCAGGCATCATTGCCTGTTTGGCCAGCAATGTTGTGGCCACAGCGTTGACCTAC
AAGGTGGCGGCGGGCGAGAAGGCGTGCTTCTACACGGATGCCAAGAAGGAAAACGAGAAGGTCGCCTTCTACTTT
GCCGTTCAATCTGGCGGCTCGTTCGACGTCGATTACCTCGTCGAGGGGCCGGGCGGCAAGATCATACTCGAGGGC
GAAAAGGAGCGCCAGGGTGACTTTGTGTTTACAGCGCAGCGAACCGGCGAATACTCATTCTGCTTCGACAATGAG
ATGAGCACTTTTACGGAGAAGATGATCGACATTGAGATCTCGAGCGAGCACGAGTCCCGCACAGCGCAACTGCCG
TCCAAGCAGGGCACGTCTCCCGAGCAGACATCGGTCTTGGAGGAGTCCATCTTCAAGATTTCTGGTCAATTGTCG
ACTATTTCGCGAAACCAGAAGTACTTCCGGACTCGCGAGAATCGGAACTTTAGCACCGTCAACAGCACGGAGAAG
CGCATTGTCAACTTTAGCATGATACAAATTGGCCTCATCGTTTGCATGGGCGCCCTGCAGGTCTTTATCGTCAGG
TTCTTCTTCCAGGGCGCACGCAAGGGCTACGTATAA
Transcript >Hirsu2|9157
ATGAGACTGCCGACCATAGCAGCAGGCATCATTGCCTGTTTGGCCAGCAATGTTGTGGCCACAGCGTTGACCTAC
AAGGTGGCGGCGGGCGAGAAGGCGTGCTTCTACACGGATGCCAAGAAGGAAAACGAGAAGGTCGCCTTCTACTTT
GCCGTTCAATCTGGCGGCTCGTTCGACGTCGATTACCTCGTCGAGGGGCCGGGCGGCAAGATCATACTCGAGGGC
GAAAAGGAGCGCCAGGGTGACTTTGTGTTTACAGCGCAGCGAACCGGCGAATACTCATTCTGCTTCGACAATGAG
ATGAGCACTTTTACGGAGAAGATGATCGACATTGAGATCTCGAGCGAGCACGAGTCCCGCACAGCGCAACTGCCG
TCCAAGCAGGGCACGTCTCCCGAGCAGACATCGGTCTTGGAGGAGTCCATCTTCAAGATTTCTGGTCAATTGTCG
ACTATTTCGCGAAACCAGAAGTACTTCCGGACTCGCGAGAATCGGAACTTTAGCACCGTCAACAGCACGGAGAAG
CGCATTGTCAACTTTAGCATGATACAAATTGGCCTCATCGTTTGCATGGGCGCCCTGCAGGTCTTTATCGTCAGG
TTCTTCTTCCAGGGCGCACGCAAGGGCTACGTATAA
Gene >Hirsu2|9157
ATGAGACTGCCGACCATAGCAGCAGGCATCATTGCCTGTTTGGCCAGCAATGTTGTGGCCACAGCGTTGACCTAC
AAGGTGGCGGCGGGCGAGAAGGCGTGCTTCTACACGGATGCCAAGAAGGAAAACGAGAAGGTCGCCTTCTACTTT
GCCGTGCGTGGCCCGAGCCTTTGGACATGATACGTGAATGCTTCTGACCGTTGCGCAATGCAGGTTCAATCTGGC
GGCTCGTTCGACGTCGATTACCTCGTCGAGGGGCCGGGCGGCAAGATCATACTCGAGGGCGAAAAGGAGCGCCAG
GGTGACTTTGTGTTTACAGCGCAGCGAACCGGCGAATACTCATTCTGCTTCGACAATGAGATGAGCACTTTTACG
GAGAAGATGATCGACATTGAGATCTCGGTCAGTCCCGCTGTCCGGACTGGGTGAAGGCAGGCAAATTGCTAACCC
GATCCTCGATGCAGAGCGAGCACGAGTCCCGCACAGCGCAACTGCCGTCCAAGCAGGGCACGTCTCCCGAGCAGA
CATCGGTCTTGGAGGAGTCCATCTTCAAGATTTCTGGTCAATTGTCGACTATTTCGCGAAACCAGAAGTACTTCC
GGACTCGCGAGAATCGGAACTTTAGCACCGTCAACAGCACGGAGAAGCGCATTGTCAACTTTAGCATGATACAAA
TTGGCCTCATCGTTTGCATGGGCGCCCTGCAGGTCTTTATCGTCAGGTTCTTCTTCCAGGTAGGCCTTGTCCCAT
ACTCGAGCCACGCCCCCGCATTGGCTGACTCGATTTTCCCTTTGCACTTCAGGGCGCACGCAAGGGCTACGTATA
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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