Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9147
Gene name
LocationContig_645:2202..2805
Strand+
Gene length (bp)603
Transcript length (bp)477
Coding sequence length (bp)477
Protein length (aa) 159

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 3.9E-10 12 127

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 73 91 18
4 111 133 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9147
MLRFLILGSHFMIFLSSLIVTALLSYFIHTNSFRGAHLIYQEVIATVTLAIYLFGMLLPLIDSYRGYLMPMNLIL
SYLWLTSFIFTAQDWGGGRCIFSPPNFGECRKKHAAEAFTFLAFFFLICNTVAEGYLLRTHGSNKGLTKERTDRA
ADNSANVV*
Coding >Hirsu2|9147
ATGTTGCGCTTCTTGATCCTCGGCAGCCACTTCATGATCTTCCTCTCGTCCTTGATAGTTACAGCGTTACTTTCA
TACTTCATCCACACCAACTCGTTCCGCGGCGCGCATCTCATCTACCAGGAAGTCATTGCTACAGTTACTCTAGCC
ATTTATCTGTTTGGCATGCTCCTCCCACTGATCGACAGCTACCGGGGTTACTTGATGCCGATGAACCTGATCTTG
TCCTATCTCTGGCTCACATCATTCATCTTCACCGCTCAGGACTGGGGCGGTGGCCGCTGCATCTTCAGCCCGCCC
AACTTTGGCGAATGTCGGAAGAAGCACGCGGCTGAAGCCTTCACTTTCCTTGCCTTCTTCTTCCTCATCTGCAAC
ACCGTAGCCGAGGGCTACCTGTTGAGGACGCATGGATCCAACAAAGGCCTTACCAAGGAGAGGACTGATCGCGCC
GCCGACAACTCCGCTAACGTTGTCTAG
Transcript >Hirsu2|9147
ATGTTGCGCTTCTTGATCCTCGGCAGCCACTTCATGATCTTCCTCTCGTCCTTGATAGTTACAGCGTTACTTTCA
TACTTCATCCACACCAACTCGTTCCGCGGCGCGCATCTCATCTACCAGGAAGTCATTGCTACAGTTACTCTAGCC
ATTTATCTGTTTGGCATGCTCCTCCCACTGATCGACAGCTACCGGGGTTACTTGATGCCGATGAACCTGATCTTG
TCCTATCTCTGGCTCACATCATTCATCTTCACCGCTCAGGACTGGGGCGGTGGCCGCTGCATCTTCAGCCCGCCC
AACTTTGGCGAATGTCGGAAGAAGCACGCGGCTGAAGCCTTCACTTTCCTTGCCTTCTTCTTCCTCATCTGCAAC
ACCGTAGCCGAGGGCTACCTGTTGAGGACGCATGGATCCAACAAAGGCCTTACCAAGGAGAGGACTGATCGCGCC
GCCGACAACTCCGCTAACGTTGTCTAG
Gene >Hirsu2|9147
ATGTTGCGCTTCTTGATCCTCGGCAGCCACTTCATGATCTTCCTCTCGTCCTTGATAGTTACAGCGTTACTTTCA
TACTTCATCCACACCAACTCGTTCCGCGGCGCGCATCTCATCTACCAGGAAGTCATTGTCAGTCTTGAGGGAATC
TGGGGACGTCAACTGTCCCGGCTTATCTGACTCTTCCTCCCAGGCTACAGTTACTCTAGCCATTTATCTGTTTGG
CATGCTCCTCCCACTGATCGACAGCTACCGGGGTTACTTGATGCCGATGAACCTGATCTTGTCCTATCTCTGGCT
CACATCATTCATCTTCACCGCTCAGGACTGGGGCGGTGGCCGCTGCATCTTCAGCCCGCCCAACTTTGGCGAATG
TCGGAAGAAGCACGCGGCTGAAGCCTTCACTTTCCTTGCCTTGTTAGTGGAATCCCACTCCCCAATTATCGCGGA
CCACGACACACTGACTGGCACGCATTACGTAGCTTCTTCCTCATCTGCAACACCGTAGCCGAGGGCTACCTGTTG
AGGACGCATGGATCCAACAAAGGCCTTACCAAGGAGAGGACTGATCGCGCCGCCGACAACTCCGCTAACGTTGTC
TAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail