Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9142
Gene name
LocationContig_643:14205..14842
Strand-
Gene length (bp)637
Transcript length (bp)462
Coding sequence length (bp)462
Protein length (aa) 154

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 2.1E-16 34 105

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 81 101 20
3 122 144 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9142
MAAPREAKDRAASTFGAAPLLGPLLFDNETSDARDHCANERTFLSYLRLAVYMAVLSVAMTLSFNLRHAPSHLER
RMARPLGLVFWALSVVMLLVGLGNYITTVNKYGRRAAIVQTGWRTQLVLAVLALCIIGTCAVLLVVPQLRSGDEA
ETS*
Coding >Hirsu2|9142
ATGGCGGCGCCGCGCGAGGCCAAGGACCGCGCTGCGTCGACGTTCGGCGCCGCGCCGCTGCTCGGCCCGCTGCTG
TTCGACAACGAGACGAGCGACGCGCGCGACCACTGCGCCAACGAGCGCACCTTCCTGTCCTACCTCCGCCTGGCC
GTCTACATGGCCGTGCTGTCCGTTGCCATGACGCTGTCCTTCAACCTGCGCCACGCGCCCAGCCACCTGGAGCGC
CGCATGGCTCGCCCGCTCGGCCTCGTCTTCTGGGCCCTGTCTGTTGTCATGCTGCTCGTCGGCCTCGGCAACTAC
ATCACGACCGTCAACAAGTACGGCCGCCGCGCGGCAATCGTGCAGACGGGCTGGAGGACGCAGCTCGTGCTGGCC
GTGCTGGCCCTCTGCATCATCGGCACCTGCGCCGTCTTGCTCGTCGTTCCCCAGCTTCGCTCCGGCGACGAGGCC
GAGACGTCCTGA
Transcript >Hirsu2|9142
ATGGCGGCGCCGCGCGAGGCCAAGGACCGCGCTGCGTCGACGTTCGGCGCCGCGCCGCTGCTCGGCCCGCTGCTG
TTCGACAACGAGACGAGCGACGCGCGCGACCACTGCGCCAACGAGCGCACCTTCCTGTCCTACCTCCGCCTGGCC
GTCTACATGGCCGTGCTGTCCGTTGCCATGACGCTGTCCTTCAACCTGCGCCACGCGCCCAGCCACCTGGAGCGC
CGCATGGCTCGCCCGCTCGGCCTCGTCTTCTGGGCCCTGTCTGTTGTCATGCTGCTCGTCGGCCTCGGCAACTAC
ATCACGACCGTCAACAAGTACGGCCGCCGCGCGGCAATCGTGCAGACGGGCTGGAGGACGCAGCTCGTGCTGGCC
GTGCTGGCCCTCTGCATCATCGGCACCTGCGCCGTCTTGCTCGTCGTTCCCCAGCTTCGCTCCGGCGACGAGGCC
GAGACGTCCTGA
Gene >Hirsu2|9142
ATGGCGGCGCCGCGCGAGGCCAAGGACCGCGCTGCGTCGACGTTCGGCGCCGCGCCGCTGCTCGGCCCGCTGCTG
TTCGACAACGAGACGAGCGACGCGCGCGACCACTGCGCCAACGAGCGCAGTCCGTCCTCCTCCCCCCCCTCGGCC
CTCGGCTGGTACGTGTTCGGCTGACGAGGCGCAGCCTTCCTGTCCTACCTCCGCCTGGCCGTCTACATGGCCGTG
CTGTCCGTTGCCATGACGCTGTCCTTCAACCTGCGCCACGCGCCCAGCCACCTGGAGCGCCGCATGGCTCGCCCG
CTCGGCCTCGTCTTCTGGGCCCTGTCTGTTGTCATGCTGCTCGTCGGCCTCGGCAACTACATCAGTGCGCGCGCC
GCTTCGTCTCCGTCGAGTGTGCGGCTGACCTGGGCAATCAAGCGACCGTCAACAAGTACGGCCGCCGCGCGGCAA
TCGTGCAGACGGGCTGGAGGACGCAGCTCGTCAGTCTTCTTTCTTCTTCCTCATCTTCTCGACGCCCGCCTGACG
CTCTGCTATATCCTAGGTGCTGGCCGTGCTGGCCCTCTGCATCATCGGCACCTGCGCCGTCTTGCTCGTCGTTCC
CCAGCTTCGCTCCGGCGACGAGGCCGAGACGTCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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