Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9118
Gene name
LocationContig_64:36851..37496
Strand-
Gene length (bp)645
Transcript length (bp)645
Coding sequence length (bp)645
Protein length (aa) 215

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13857 Ank_5 Ankyrin repeats (many copies) 2.7E-08 21 74
PF13637 Ank_4 Ankyrin repeats (many copies) 2.0E-05 37 75

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UU77|YQMA_SCHPO Ankyrin repeat-containing protein P1E11.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCP1E11.10 PE=3 SV=1 30 124 4.0E-21
sp|P25631|YCU1_YEAST Ankyrin repeat-containing protein YCR051W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR051W PE=1 SV=1 6 202 3.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9118
MAQGQNPFLLAADNSPALLPLLRQDPSQASAQDEHGYSLVHAAASYNHLDLLRALVLDFKVDVNLRDEDDETPLF
VVETVEAAKVLVEELAADVRHTGSDGLTAADKIEADGDFPAVAAYLKTLESAGRADHVSASVPDVAEPSAQGIEF
TLGTLDPTHDIPDEVDPEFRRRIEELAQKDLNTPSGQADLRQLVEDAISNQGLADERHTRPRHA*
Coding >Hirsu2|9118
ATGGCGCAAGGGCAAAACCCGTTTCTCCTCGCTGCCGACAACAGTCCTGCGCTGCTGCCGCTTCTCCGCCAAGAT
CCTTCTCAGGCGTCCGCGCAGGACGAGCACGGCTACTCCCTCGTCCACGCCGCCGCCAGCTACAACCATCTGGAT
CTACTGCGAGCTCTCGTGCTCGACTTCAAAGTCGACGTCAACCTGAGGGACGAGGACGACGAAACTCCCCTCTTC
GTCGTCGAGACCGTGGAAGCCGCAAAAGTCCTGGTCGAGGAGCTGGCCGCCGACGTTCGCCATACCGGCTCCGAC
GGATTGACGGCGGCAGACAAGATCGAGGCCGATGGCGACTTCCCGGCCGTTGCAGCCTATCTGAAGACGCTCGAA
TCTGCCGGACGGGCGGACCATGTATCCGCGTCCGTTCCCGACGTCGCCGAGCCTTCCGCCCAGGGCATCGAGTTC
ACTCTTGGCACACTGGATCCGACCCACGACATCCCAGACGAGGTCGATCCCGAGTTCCGCCGCCGGATCGAAGAA
CTTGCCCAGAAAGATCTCAACACCCCCAGTGGGCAGGCCGATCTGCGGCAGCTGGTCGAGGACGCCATCTCAAAC
CAAGGTCTGGCCGACGAGCGCCACACTCGCCCACGGCACGCTTAA
Transcript >Hirsu2|9118
ATGGCGCAAGGGCAAAACCCGTTTCTCCTCGCTGCCGACAACAGTCCTGCGCTGCTGCCGCTTCTCCGCCAAGAT
CCTTCTCAGGCGTCCGCGCAGGACGAGCACGGCTACTCCCTCGTCCACGCCGCCGCCAGCTACAACCATCTGGAT
CTACTGCGAGCTCTCGTGCTCGACTTCAAAGTCGACGTCAACCTGAGGGACGAGGACGACGAAACTCCCCTCTTC
GTCGTCGAGACCGTGGAAGCCGCAAAAGTCCTGGTCGAGGAGCTGGCCGCCGACGTTCGCCATACCGGCTCCGAC
GGATTGACGGCGGCAGACAAGATCGAGGCCGATGGCGACTTCCCGGCCGTTGCAGCCTATCTGAAGACGCTCGAA
TCTGCCGGACGGGCGGACCATGTATCCGCGTCCGTTCCCGACGTCGCCGAGCCTTCCGCCCAGGGCATCGAGTTC
ACTCTTGGCACACTGGATCCGACCCACGACATCCCAGACGAGGTCGATCCCGAGTTCCGCCGCCGGATCGAAGAA
CTTGCCCAGAAAGATCTCAACACCCCCAGTGGGCAGGCCGATCTGCGGCAGCTGGTCGAGGACGCCATCTCAAAC
CAAGGTCTGGCCGACGAGCGCCACACTCGCCCACGGCACGCTTAA
Gene >Hirsu2|9118
ATGGCGCAAGGGCAAAACCCGTTTCTCCTCGCTGCCGACAACAGTCCTGCGCTGCTGCCGCTTCTCCGCCAAGAT
CCTTCTCAGGCGTCCGCGCAGGACGAGCACGGCTACTCCCTCGTCCACGCCGCCGCCAGCTACAACCATCTGGAT
CTACTGCGAGCTCTCGTGCTCGACTTCAAAGTCGACGTCAACCTGAGGGACGAGGACGACGAAACTCCCCTCTTC
GTCGTCGAGACCGTGGAAGCCGCAAAAGTCCTGGTCGAGGAGCTGGCCGCCGACGTTCGCCATACCGGCTCCGAC
GGATTGACGGCGGCAGACAAGATCGAGGCCGATGGCGACTTCCCGGCCGTTGCAGCCTATCTGAAGACGCTCGAA
TCTGCCGGACGGGCGGACCATGTATCCGCGTCCGTTCCCGACGTCGCCGAGCCTTCCGCCCAGGGCATCGAGTTC
ACTCTTGGCACACTGGATCCGACCCACGACATCCCAGACGAGGTCGATCCCGAGTTCCGCCGCCGGATCGAAGAA
CTTGCCCAGAAAGATCTCAACACCCCCAGTGGGCAGGCCGATCTGCGGCAGCTGGTCGAGGACGCCATCTCAAAC
CAAGGTCTGGCCGACGAGCGCCACACTCGCCCACGGCACGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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