Protein ID | Hirsu2|9108 |
Gene name | |
Location | Contig_64:19502..19784 |
Strand | - |
Gene length (bp) | 282 |
Transcript length (bp) | 228 |
Coding sequence length (bp) | 228 |
Protein length (aa) | 76 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1394 | 0.1798 | 0.3223 | 0.1691 | 0.9271 | 0.4455 | 0.3093 | 0.2091 | 0.2291 | 0.1185 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.829085 |
Orthofinder run ID | 4 |
Orthogroup | 5735 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9108 MPFRWFVSIAALSGAAFAAKVWLDGAVERRDENAQRAEREAAERQRRNDALMDVYGDRSSLAALEQAVKFYEKKQ * |
Coding | >Hirsu2|9108 ATGCCGTTCCGCTGGTTCGTGTCCATCGCCGCCCTCTCCGGCGCCGCCTTCGCCGCCAAGGTCTGGCTCGACGGC GCCGTGGAGCGCCGCGACGAAAATGCCCAACGCGCCGAGCGCGAGGCAGCCGAGCGACAGAGACGCAACGACGCC CTGATGGACGTCTACGGCGATCGCTCCAGCCTGGCCGCGCTCGAGCAGGCCGTCAAGTTTTACGAGAAGAAACAA TAG |
Transcript | >Hirsu2|9108 ATGCCGTTCCGCTGGTTCGTGTCCATCGCCGCCCTCTCCGGCGCCGCCTTCGCCGCCAAGGTCTGGCTCGACGGC GCCGTGGAGCGCCGCGACGAAAATGCCCAACGCGCCGAGCGCGAGGCAGCCGAGCGACAGAGACGCAACGACGCC CTGATGGACGTCTACGGCGATCGCTCCAGCCTGGCCGCGCTCGAGCAGGCCGTCAAGTTTTACGAGAAGAAACAA TAG |
Gene | >Hirsu2|9108 ATGCCGTTCCGCTGGTGAGTCGTGCCGGTGACCAGGCCCGAGAAGCATACTGAAGCCGAGAGCCCCAGGTTCGTG TCCATCGCCGCCCTCTCCGGCGCCGCCTTCGCCGCCAAGGTCTGGCTCGACGGCGCCGTGGAGCGCCGCGACGAA AATGCCCAACGCGCCGAGCGCGAGGCAGCCGAGCGACAGAGACGCAACGACGCCCTGATGGACGTCTACGGCGAT CGCTCCAGCCTGGCCGCGCTCGAGCAGGCCGTCAAGTTTTACGAGAAGAAACAATAG |