Protein ID | Hirsu2|9088 |
Gene name | |
Location | Contig_638:2048..3389 |
Strand | + |
Gene length (bp) | 1341 |
Transcript length (bp) | 1140 |
Coding sequence length (bp) | 1140 |
Protein length (aa) | 380 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01088 | Peptidase_C12 | Ubiquitin carboxyl-terminal hydrolase, family 1 | 2.0E-42 | 2 | 210 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9XSJ0|UCHL5_BOVIN | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus GN=UCHL5 PE=2 SV=1 | 6 | 225 | 1.0E-26 |
sp|Q54N38|UCHL5_DICDI | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium discoideum GN=uch2 PE=3 SV=1 | 6 | 239 | 2.0E-26 |
sp|Q06AT3|UCHL5_PIG | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1 | 6 | 225 | 3.0E-26 |
sp|Q9Y5K5|UCHL5_HUMAN | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3 | 6 | 225 | 4.0E-26 |
sp|Q9WUP7|UCHL5_MOUSE | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus GN=Uchl5 PE=1 SV=2 | 6 | 225 | 4.0E-26 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9XSJ0|UCHL5_BOVIN | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus GN=UCHL5 PE=2 SV=1 | 6 | 225 | 1.0E-26 |
sp|Q54N38|UCHL5_DICDI | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium discoideum GN=uch2 PE=3 SV=1 | 6 | 239 | 2.0E-26 |
sp|Q06AT3|UCHL5_PIG | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1 | 6 | 225 | 3.0E-26 |
sp|Q9Y5K5|UCHL5_HUMAN | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3 | 6 | 225 | 4.0E-26 |
sp|Q9WUP7|UCHL5_MOUSE | Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus GN=Uchl5 PE=1 SV=2 | 6 | 225 | 4.0E-26 |
sp|Q09444|UBH4_CAEEL | Probable ubiquitin carboxyl-terminal hydrolase ubh-4 OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2 | 4 | 226 | 8.0E-26 |
sp|Q9UUB6|UBLH2_SCHPO | Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1 | 8 | 227 | 1.0E-20 |
sp|D3ZHS6|BAP1_RAT | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus GN=Bap1 PE=1 SV=2 | 7 | 210 | 6.0E-17 |
sp|Q99PU7|BAP1_MOUSE | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1 PE=1 SV=1 | 7 | 210 | 1.0E-16 |
sp|A2VDM8|BAP1_BOVIN | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Bos taurus GN=BAP1 PE=2 SV=1 | 7 | 210 | 1.0E-16 |
sp|Q66JB6|BAP1_XENTR | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis GN=bap1 PE=2 SV=1 | 5 | 210 | 1.0E-16 |
sp|Q5F3N6|BAP1_CHICK | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus GN=BAP1 PE=2 SV=1 | 7 | 210 | 2.0E-16 |
sp|Q92560|BAP1_HUMAN | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2 | 7 | 210 | 2.0E-16 |
sp|Q52L14|BAP1_XENLA | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis GN=bap1 PE=2 SV=1 | 5 | 210 | 3.0E-16 |
sp|A1L2G3|BAP1_DANRE | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio GN=bap1 PE=2 SV=2 | 7 | 210 | 1.0E-15 |
sp|Q17N72|CALYP_AEDAE | Ubiquitin carboxyl-terminal hydrolase calypso OS=Aedes aegypti GN=calypso PE=3 SV=1 | 7 | 249 | 2.0E-15 |
sp|Q7K5N4|CALYP_DROME | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila melanogaster GN=calypso PE=1 SV=1 | 4 | 368 | 1.0E-14 |
sp|B4QHH0|CALYP_DROSI | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila simulans GN=calypso PE=3 SV=1 | 4 | 368 | 1.0E-14 |
sp|B4P6P6|CALYP_DROYA | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba GN=calypso PE=3 SV=1 | 4 | 368 | 1.0E-14 |
sp|B0W2R4|CALYP_CULQU | Ubiquitin carboxyl-terminal hydrolase calypso OS=Culex quinquefasciatus GN=calypso PE=3 SV=1 | 7 | 200 | 2.0E-14 |
sp|B3NPV7|CALYP_DROER | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta GN=calypso PE=3 SV=1 | 4 | 368 | 2.0E-14 |
sp|B3MIV9|CALYP_DROAN | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila ananassae GN=calypso PE=3 SV=1 | 4 | 368 | 2.0E-14 |
sp|C4A0D9|BAP1_BRAFL | Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae GN=BAP1 PE=3 SV=1 | 7 | 250 | 3.0E-14 |
sp|B4HST0|CALYP_DROSE | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila sechellia GN=calypso PE=3 SV=1 | 4 | 368 | 3.0E-14 |
sp|Q291J4|CALYP_DROPS | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila pseudoobscura pseudoobscura GN=calypso PE=3 SV=1 | 4 | 246 | 9.0E-14 |
sp|B4GAM2|CALYP_DROPE | Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila persimilis GN=calypso PE=3 SV=1 | 4 | 246 | 9.0E-14 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006511 | ubiquitin-dependent protein catabolic process | Yes |
GO:0004843 | cysteine-type deubiquitinase activity | Yes |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0016787 | hydrolase activity | No |
GO:0008150 | biological_process | No |
GO:0019538 | protein metabolic process | No |
GO:0006508 | proteolysis | No |
GO:0003824 | catalytic activity | No |
GO:0071704 | organic substance metabolic process | No |
GO:0009056 | catabolic process | No |
GO:0044260 | cellular macromolecule metabolic process | No |
GO:0009987 | cellular process | No |
GO:0008152 | metabolic process | No |
GO:0044248 | cellular catabolic process | No |
GO:0019941 | modification-dependent protein catabolic process | No |
GO:1901575 | organic substance catabolic process | No |
GO:0044265 | cellular macromolecule catabolic process | No |
GO:0101005 | deubiquitinase activity | No |
GO:0044238 | primary metabolic process | No |
GO:0008233 | peptidase activity | No |
GO:0009057 | macromolecule catabolic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0019783 | ubiquitin-like protein peptidase activity | No |
GO:0051603 | proteolysis involved in protein catabolic process | No |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0003674 | molecular_function | No |
GO:0044237 | cellular metabolic process | No |
GO:0043632 | modification-dependent macromolecule catabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0008234 | cysteine-type peptidase activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.4257 | 0.8124 | 0.0663 | 0.0156 | 0.0789 | 0.0199 | 0.1022 | 0.0515 | 0.0641 | 0.0009 |
Orthofinder run ID | 4 |
Orthogroup | 4387 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9088 LNFLPQPVFGLIFLFHYAPQLVDEEEEDGEEAPVWFANQTTNNSCASVALVNIVMNAEDVELGDELQNFKDLTKD LNSALRGYQIGANDFIRAAHNSFARRIDLLNADLCLANEVEAAQIEPPQKRLIKRRGATSRSGDKQKTAGPRTAA ARAKKKQPHVEYGFHFIAYVPAGGFVWELDGMRTKPRNIGGELTEKSWTDIVLPRIQHRIKEYGDSENGFSLLAL CRSPLDTHRSLIASRLSGLRSLNTKMMGDSSFTDLVAASPDACASVVEGLDEFGLSPPIVYATGIPPFVTEHMAR ADFDHHEAYSLRQQLATDVATSMTKYREEVLAVAEEERRVQERRKDYMPALHCWMSKLASKGVLEEVMDTLRSGP ADSP* |
Coding | >Hirsu2|9088 CTGAACTTCTTGCCCCAGCCAGTCTTCGGATTGATATTCCTCTTTCACTATGCCCCCCAGCTAGTTGATGAGGAG GAGGAAGACGGCGAGGAGGCTCCGGTTTGGTTTGCCAACCAGACAACCAACAATTCGTGCGCGTCGGTCGCCCTG GTCAACATTGTCATGAATGCCGAGGACGTGGAGCTCGGCGACGAGCTTCAGAACTTCAAAGACTTGACCAAGGAC CTGAACTCGGCCCTTCGTGGCTATCAGATCGGAGCCAACGACTTCATCAGAGCAGCGCACAACTCATTCGCGCGG CGAATCGACCTGCTGAATGCTGACCTGTGCTTGGCCAACGAGGTGGAGGCGGCCCAGATTGAACCGCCCCAGAAG CGTTTGATCAAGCGCAGAGGGGCGACGAGCAGGTCCGGCGACAAGCAGAAGACGGCAGGACCGAGGACCGCGGCG GCGAGAGCAAAGAAGAAGCAGCCCCATGTCGAATACGGATTTCACTTCATCGCGTATGTTCCTGCCGGTGGCTTC GTCTGGGAGCTTGACGGCATGAGAACGAAGCCTCGGAACATAGGAGGCGAGCTGACCGAGAAAAGTTGGACGGAC ATCGTGTTACCCCGGATCCAGCACCGCATCAAAGAGTATGGTGACAGCGAGAACGGCTTCAGCCTTCTGGCACTG TGCCGCAGCCCTCTCGACACGCACCGGAGTTTGATTGCCTCGAGACTGAGCGGACTCCGCTCCCTAAATACCAAA ATGATGGGCGACTCCTCGTTCACGGATCTCGTCGCCGCCAGCCCTGACGCTTGCGCCAGCGTAGTAGAAGGTCTT GACGAGTTTGGCCTCTCGCCGCCCATTGTGTACGCCACAGGAATCCCTCCCTTCGTCACGGAGCACATGGCGCGC GCCGACTTCGACCATCACGAAGCCTATAGCCTGCGCCAGCAACTTGCTACCGACGTCGCAACCTCCATGACTAAG TACCGCGAGGAGGTCCTGGCTGTAGCGGAGGAGGAACGGCGCGTACAGGAGCGAAGGAAGGATTACATGCCGGCG CTCCACTGCTGGATGTCCAAGCTGGCCAGTAAGGGAGTATTAGAGGAAGTGATGGACACATTGCGGTCAGGTCCT GCCGACTCGCCCTAG |
Transcript | >Hirsu2|9088 CTGAACTTCTTGCCCCAGCCAGTCTTCGGATTGATATTCCTCTTTCACTATGCCCCCCAGCTAGTTGATGAGGAG GAGGAAGACGGCGAGGAGGCTCCGGTTTGGTTTGCCAACCAGACAACCAACAATTCGTGCGCGTCGGTCGCCCTG GTCAACATTGTCATGAATGCCGAGGACGTGGAGCTCGGCGACGAGCTTCAGAACTTCAAAGACTTGACCAAGGAC CTGAACTCGGCCCTTCGTGGCTATCAGATCGGAGCCAACGACTTCATCAGAGCAGCGCACAACTCATTCGCGCGG CGAATCGACCTGCTGAATGCTGACCTGTGCTTGGCCAACGAGGTGGAGGCGGCCCAGATTGAACCGCCCCAGAAG CGTTTGATCAAGCGCAGAGGGGCGACGAGCAGGTCCGGCGACAAGCAGAAGACGGCAGGACCGAGGACCGCGGCG GCGAGAGCAAAGAAGAAGCAGCCCCATGTCGAATACGGATTTCACTTCATCGCGTATGTTCCTGCCGGTGGCTTC GTCTGGGAGCTTGACGGCATGAGAACGAAGCCTCGGAACATAGGAGGCGAGCTGACCGAGAAAAGTTGGACGGAC ATCGTGTTACCCCGGATCCAGCACCGCATCAAAGAGTATGGTGACAGCGAGAACGGCTTCAGCCTTCTGGCACTG TGCCGCAGCCCTCTCGACACGCACCGGAGTTTGATTGCCTCGAGACTGAGCGGACTCCGCTCCCTAAATACCAAA ATGATGGGCGACTCCTCGTTCACGGATCTCGTCGCCGCCAGCCCTGACGCTTGCGCCAGCGTAGTAGAAGGTCTT GACGAGTTTGGCCTCTCGCCGCCCATTGTGTACGCCACAGGAATCCCTCCCTTCGTCACGGAGCACATGGCGCGC GCCGACTTCGACCATCACGAAGCCTATAGCCTGCGCCAGCAACTTGCTACCGACGTCGCAACCTCCATGACTAAG TACCGCGAGGAGGTCCTGGCTGTAGCGGAGGAGGAACGGCGCGTACAGGAGCGAAGGAAGGATTACATGCCGGCG CTCCACTGCTGGATGTCCAAGCTGGCCAGTAAGGGAGTATTAGAGGAAGTGATGGACACATTGCGGTCAGGTCCT GCCGACTCGCCCTAG |
Gene | >Hirsu2|9088 CTGAACTTCTTGCCGTGAGTCTACCTTCAAGCTTCACTGAACCGTGTGCTGACAACTCTTCTCAACGTCTTTTGC AGCCAGCCAGTCTTCGGATTGATATTCCTCTTTCACTATGCCCCCCAGCTAGTTGATGAGGAGGAGGAAGACGGC GAGGAGGCTCCGGTTTGGTTTGCCAACCAGGTTGTAATCACCACCCAGCAAAGTCCCCGCCTCGCTGACCGTAAC TCGCTGATCGATGGCCTTGTTTAGACAACCAACAATTCGTGCGCGTCGGTCGCCCTGGTCAACATTGTCATGAAT GCCGAGGACGTGGAGCTCGGCGACGAGCTTCAGAACTTCAAAGACTTGACCAAGGACCTGAACTCGGCCCTTCGT GGCTATCAGATCGGAGCCAACGACTTCATCAGAGCAGCGCACAACTCATTCGCGCGGCGAATCGACCTGCTGAAT GCTGACCTGTGCTTGGCCAACGAGGTGGAGGCGGCCCAGATTGAACCGCCCCAGAAGCGTTTGATCAAGCGCAGA GGGGCGACGAGCAGGTCCGGCGACAAGCAGAAGACGGCAGGACCGAGGACCGCGGCGGCGAGAGCAAAGAAGAAG CAGCCCCATGTCGAATACGGATTTCACTTCATCGCGTATGTTCCTGCCGGTGGCTTCGTCTGGGAGCTTGACGGC ATGAGAACGAAGCCTCGGAACATAGGTGAGAAATCCACATCGTCTGCACAGAAAATAAAAATTGACCGTTGTGGT CGCTGACCTCCATCAGCAGGAGGCGAGCTGACCGAGAAAAGTTGGACGGACATCGTGTTACCCCGGATCCAGCAC CGCATCAAAGAGTATGGTGACAGCGAGAACGGCTTCAGCCTTCTGGCACTGTGCCGCAGCCCTCTCGACACGCAC CGGAGTTTGATTGCCTCGAGACTGAGCGGACTCCGCTCCCTAAATACCAAAATGATGGGCGACTCCTCGTTCACG GATCTCGTCGCCGCCAGCCCTGACGCTTGCGCCAGCGTAGTAGAAGGTCTTGACGAGTTTGGCCTCTCGCCGCCC ATTGTGTACGCCACAGGAATCCCTCCCTTCGTCACGGAGCACATGGCGCGCGCCGACTTCGACCATCACGAAGCC TATAGCCTGCGCCAGCAACTTGCTACCGACGTCGCAACCTCCATGACTAAGTACCGCGAGGAGGTCCTGGCTGTA GCGGAGGAGGAACGGCGCGTACAGGAGCGAAGGAAGGATTACATGCCGGCGCTCCACTGCTGGATGTCCAAGCTG GCCAGTAAGGGAGTATTAGAGGAAGTGATGGACACATTGCGGTCAGGTCCTGCCGACTCGCCCTAG |