Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9069
Gene name
LocationContig_634:4705..5884
Strand+
Gene length (bp)1179
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00188 CAP Cysteine-rich secretory protein family 6.2E-06 172 308

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1128 0.0791 0.9248 0.0936 0.1193 0.0153 0.1455 0.167 0.1286 0.0024

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.998761

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10811
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9069 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9069
MRFGGFVLALPLAAAFPRSRQASSGSPGSVLTKAKRQVYELYDAEITDNEIPEDTFPIPIVSKGPARHRHGSQHG
ALHSKPQKLEVDIPNELYVPEDSAVASSKSASDTPSGTQLHSGANVGPSPTSGQGSINSSSSNGPFASMEALVES
VMKDEYKKLNTDVEFRHKVMLHCHNVVRKKFELPELAWGTAPTTDAANWAQTCSSDHPQTVQYNQNMAWPIMEKE
DLLDGTLTSCALWVIEVYILDFETQDVIKTGALEKLRSIVANMEQGKNVKVGHIENMLKRGPGSLGCDSYFCGDK
KMVTEVCNLDFDPEEREKPVTKPANLNLDTDMPLIYVLRGALEGAYAEHKSKTTA*
Coding >Hirsu2|9069
ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC
TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG
ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT
GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC
GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG
ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC
GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC
GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC
CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA
GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA
GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG
GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA
AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAAC
CTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTCCGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAG
TCCAAGACGACCGCCTAA
Transcript >Hirsu2|9069
ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC
TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG
ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT
GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC
GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG
ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC
GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC
GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC
CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA
GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA
GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG
GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA
AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAAC
CTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTCCGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAG
TCCAAGACGACCGCCTAA
Gene >Hirsu2|9069
ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC
TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG
ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT
GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC
GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG
ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC
GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC
GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC
CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA
GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA
GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG
GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA
AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGGTAAGCTCCCTTCATCATGTTTCCCTTGACCCTAA
TAACATCTCAAAACCCCCNNNNNCCCCCCCCCCCCCCCCCCCAAGCGAAATCGTTTCTGACAAAACCTGCGCACA
GAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAACCTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTC
CGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAGTCCAAGACGACCGCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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