© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9069 |
| Gene name | |
| Location | Contig_634:4705..5884 |
| Strand | + |
| Gene length (bp) | 1179 |
| Transcript length (bp) | 1068 |
| Coding sequence length (bp) | 1068 |
| Protein length (aa) | 356 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00188 | CAP | Cysteine-rich secretory protein family | 6.2E-06 | 172 | 308 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1128 | 0.0791 | 0.9248 | 0.0936 | 0.1193 | 0.0153 | 0.1455 | 0.167 | 0.1286 | 0.0024 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.998761 |
| Orthofinder run ID | 4 |
| Orthogroup | 10811 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|9069 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9069 MRFGGFVLALPLAAAFPRSRQASSGSPGSVLTKAKRQVYELYDAEITDNEIPEDTFPIPIVSKGPARHRHGSQHG ALHSKPQKLEVDIPNELYVPEDSAVASSKSASDTPSGTQLHSGANVGPSPTSGQGSINSSSSNGPFASMEALVES VMKDEYKKLNTDVEFRHKVMLHCHNVVRKKFELPELAWGTAPTTDAANWAQTCSSDHPQTVQYNQNMAWPIMEKE DLLDGTLTSCALWVIEVYILDFETQDVIKTGALEKLRSIVANMEQGKNVKVGHIENMLKRGPGSLGCDSYFCGDK KMVTEVCNLDFDPEEREKPVTKPANLNLDTDMPLIYVLRGALEGAYAEHKSKTTA* |
| Coding | >Hirsu2|9069 ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAAC CTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTCCGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAG TCCAAGACGACCGCCTAA |
| Transcript | >Hirsu2|9069 ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAAC CTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTCCGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAG TCCAAGACGACCGCCTAA |
| Gene | >Hirsu2|9069 ATGCGTTTCGGTGGCTTCGTCTTGGCCCTTCCTCTGGCCGCGGCCTTCCCTCGGTCCCGCCAGGCGTCGTCGGGC TCGCCAGGATCGGTCTTGACCAAGGCCAAGCGCCAGGTCTATGAACTGTACGACGCCGAGATCACCGATAACGAG ATCCCCGAGGACACATTCCCTATCCCGATCGTCAGCAAAGGCCCGGCACGTCACAGGCATGGCAGCCAGCACGGT GCCCTGCACAGCAAGCCGCAGAAGCTAGAAGTGGATATACCGAACGAGTTGTATGTCCCTGAAGACTCGGCCGTC GCCAGCTCCAAGTCGGCCAGCGACACGCCCAGCGGGACGCAGCTGCATTCGGGAGCCAACGTCGGGCCGTCCCCG ACCTCCGGGCAGGGCTCCATAAACTCGTCCTCCTCGAACGGCCCGTTCGCGAGCATGGAGGCCCTCGTGGAAAGC GTCATGAAGGACGAGTACAAAAAGTTGAATACCGATGTGGAGTTCCGCCACAAGGTCATGCTCCACTGCCACAAC GTGGTGCGCAAGAAGTTCGAGCTCCCCGAACTCGCCTGGGGGACAGCGCCGACCACCGACGCGGCCAATTGGGCC CAGACGTGCTCCTCCGATCACCCCCAAACGGTCCAGTACAACCAGAACATGGCCTGGCCCATTATGGAAAAGGAA GACTTGCTGGATGGCACGCTCACGAGCTGCGCCCTGTGGGTGATTGAGGTGTACATCCTCGACTTCGAAACGCAA GACGTCATCAAGACCGGCGCGCTGGAGAAACTGCGGTCCATAGTCGCCAACATGGAGCAAGGGAAGAACGTCAAG GTCGGCCACATCGAAAACATGCTCAAGCGCGGCCCCGGCAGTCTTGGCTGCGACTCGTACTTCTGCGGCGACAAA AAGATGGTCACCGAGGTCTGCAACCTGGACTTCGACCCGGGTAAGCTCCCTTCATCATGTTTCCCTTGACCCTAA TAACATCTCAAAACCCCCNNNNNCCCCCCCCCCCCCCCCCCCAAGCGAAATCGTTTCTGACAAAACCTGCGCACA GAGGAACGAGAAAAGCCCGTGACCAAGCCGGCGAACCTGAACCTCGATACCGACATGCCCCTCATCTACGTCCTC CGAGGCGCGCTGGAGGGGGCTTATGCGGAGCACAAGTCCAAGACGACCGCCTAA |