Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9055
Gene name
LocationContig_632:1888..2463
Strand-
Gene length (bp)575
Transcript length (bp)369
Coding sequence length (bp)369
Protein length (aa) 123

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15932 DUF4748 Domain of unknown function (DUF4748) 4.8E-26 4 53

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 25 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9055
MNNVRSFWLGWGSLCVAGGGAYYFAKREINADRQAKLEQARKKQRDMRSLEYAPAEPSASAPSAAGDGGPAQTDS
AGSPSQEASHDPAPTRHAPATESQRVGEKSKYESSVPYRSPKGDRFS*
Coding >Hirsu2|9055
ATGAACAACGTCCGGTCCTTTTGGCTCGGCTGGGGCTCCCTGTGTGTCGCCGGAGGCGGAGCCTACTACTTCGCC
AAGCGCGAGATCAACGCCGACCGCCAGGCCAAGCTGGAGCAGGCGCGCAAGAAGCAGCGCGACATGCGATCGCTC
GAGTACGCGCCCGCCGAGCCCAGCGCGTCCGCCCCGTCCGCTGCCGGCGACGGCGGCCCCGCTCAGACCGACAGC
GCCGGCTCGCCCAGCCAAGAAGCCAGCCACGATCCGGCGCCGACAAGACACGCGCCCGCCACCGAGTCGCAGCGC
GTCGGCGAGAAGAGCAAGTACGAAAGCAGCGTGCCCTATCGCAGTCCGAAGGGCGACAGGTTCTCGTAG
Transcript >Hirsu2|9055
ATGAACAACGTCCGGTCCTTTTGGCTCGGCTGGGGCTCCCTGTGTGTCGCCGGAGGCGGAGCCTACTACTTCGCC
AAGCGCGAGATCAACGCCGACCGCCAGGCCAAGCTGGAGCAGGCGCGCAAGAAGCAGCGCGACATGCGATCGCTC
GAGTACGCGCCCGCCGAGCCCAGCGCGTCCGCCCCGTCCGCTGCCGGCGACGGCGGCCCCGCTCAGACCGACAGC
GCCGGCTCGCCCAGCCAAGAAGCCAGCCACGATCCGGCGCCGACAAGACACGCGCCCGCCACCGAGTCGCAGCGC
GTCGGCGAGAAGAGCAAGTACGAAAGCAGCGTGCCCTATCGCAGTCCGAAGGGCGACAGGTTCTCGTAG
Gene >Hirsu2|9055
ATGAACAACGTACGTGGCCGTTCGCCCCGGGTCTCCCGCTTACACGTACCGCAACACTGACCAGCACCAGGTCCG
GTCCTTTTGGTTCGCCGCCACCCTGCCTCTCTCCCCGTCGCCGCCTCGCTGACCGCCCGGATTCTGCGTCTCCGC
AGGCTCGGCTGGGGCTCCCTGTGTGTCGGTACGACGCCCCCTACCGTCCTCCCTCGCCTTCCCGGCGCATGCCCT
TGAGCCGATTCTGACGGCGCTCCGTCGCAGCCGGAGGCGGAGCCTACTACTTCGCCAAGCGCGAGATCAACGCCG
ACCGCCAGGCCAAGCTGGAGCAGGCGCGCAAGAAGCAGCGCGACATGCGATCGCTCGAGTACGCGCCCGCCGAGC
CCAGCGCGTCCGCCCCGTCCGCTGCCGGCGACGGCGGCCCCGCTCAGACCGACAGCGCCGGCTCGCCCAGCCAAG
AAGCCAGCCACGATCCGGCGCCGACAAGACACGCGCCCGCCACCGAGTCGCAGCGCGTCGGCGAGAAGAGCAAGT
ACGAAAGCAGCGTGCCCTATCGCAGTCCGAAGGGCGACAGGTTCTCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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