Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9054
Gene name
LocationContig_632:317..1348
Strand-
Gene length (bp)1031
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04818 CTD_bind RNA polymerase II-binding domain. 2.3E-11 95 158

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9054
MVTTPDLAIAKAALTATLLRADPTSLSRAAIAEFLQLLDNTLDECSRPNVQKCKNWIVANAAASSGRNATLGKYL
VALSESMETDFDRPSVRRRRLHVLYVASDVLHHVVTRQGLRDFSRAWEAHLPAVVAAASTFEKYPRHLAKVRDLI
ALWEERAYVPPALVTRIREAFTRASDKDSGTRIQMSSEALKLAKEAPFVLPASHGDASAPWSDLPAASWLAHLDP
NSAMPMSRSLLRPIQLRPGPAKEALAKLVKATLSDADDLYRKGRLQERAAVDFTLLGEMRKPREASSATGLADAN
TEVP*
Coding >Hirsu2|9054
ATGGTGACGACTCCGGACCTCGCCATCGCCAAGGCCGCGCTCACGGCCACGCTTCTTCGCGCCGATCCCACGTCG
CTGAGTCGCGCCGCCATCGCCGAGTTCCTGCAGCTGCTCGACAACACGCTGGACGAGTGTTCGCGTCCCAACGTT
CAGAAATGTAAGAACTGGATTGTCGCCAACGCGGCGGCCTCGAGTGGCCGGAATGCCACCCTGGGCAAGTATCTC
GTCGCTCTCTCCGAGAGCATGGAGACGGACTTTGACCGGCCGAGCGTCCGCCGCCGGAGGCTGCACGTGCTCTAC
GTCGCCAGCGATGTGCTGCACCACGTCGTCACCCGCCAGGGGCTCCGTGACTTCTCCCGGGCCTGGGAGGCTCAC
CTGCCCGCCGTCGTGGCCGCCGCCTCCACCTTCGAAAAGTACCCCAGGCACTTGGCCAAGGTGCGTGACCTGATT
GCGCTCTGGGAGGAGCGTGCCTACGTCCCGCCCGCCCTCGTGACCCGGATCCGAGAAGCCTTCACCCGTGCCTCG
GACAAGGACTCGGGAACCCGCATCCAGATGTCCTCCGAGGCCCTCAAGCTCGCCAAGGAGGCCCCCTTCGTCCTC
CCCGCCTCGCACGGCGACGCCTCGGCGCCCTGGAGCGACCTGCCCGCCGCCTCCTGGCTGGCGCATCTGGATCCC
AACTCTGCCATGCCCATGAGCCGCTCTCTGCTGCGCCCCATCCAGCTCAGGCCGGGGCCTGCCAAGGAGGCGCTG
GCCAAGCTGGTCAAGGCCACGCTCTCGGACGCCGACGACCTGTACCGAAAGGGGCGCCTGCAGGAGAGGGCGGCC
GTCGACTTCACCCTCCTCGGCGAGATGCGCAAGCCGCGCGAGGCGTCCTCGGCCACGGGCCTTGCCGACGCCAAC
ACAGAAGTGCCATGA
Transcript >Hirsu2|9054
ATGGTGACGACTCCGGACCTCGCCATCGCCAAGGCCGCGCTCACGGCCACGCTTCTTCGCGCCGATCCCACGTCG
CTGAGTCGCGCCGCCATCGCCGAGTTCCTGCAGCTGCTCGACAACACGCTGGACGAGTGTTCGCGTCCCAACGTT
CAGAAATGTAAGAACTGGATTGTCGCCAACGCGGCGGCCTCGAGTGGCCGGAATGCCACCCTGGGCAAGTATCTC
GTCGCTCTCTCCGAGAGCATGGAGACGGACTTTGACCGGCCGAGCGTCCGCCGCCGGAGGCTGCACGTGCTCTAC
GTCGCCAGCGATGTGCTGCACCACGTCGTCACCCGCCAGGGGCTCCGTGACTTCTCCCGGGCCTGGGAGGCTCAC
CTGCCCGCCGTCGTGGCCGCCGCCTCCACCTTCGAAAAGTACCCCAGGCACTTGGCCAAGGTGCGTGACCTGATT
GCGCTCTGGGAGGAGCGTGCCTACGTCCCGCCCGCCCTCGTGACCCGGATCCGAGAAGCCTTCACCCGTGCCTCG
GACAAGGACTCGGGAACCCGCATCCAGATGTCCTCCGAGGCCCTCAAGCTCGCCAAGGAGGCCCCCTTCGTCCTC
CCCGCCTCGCACGGCGACGCCTCGGCGCCCTGGAGCGACCTGCCCGCCGCCTCCTGGCTGGCGCATCTGGATCCC
AACTCTGCCATGCCCATGAGCCGCTCTCTGCTGCGCCCCATCCAGCTCAGGCCGGGGCCTGCCAAGGAGGCGCTG
GCCAAGCTGGTCAAGGCCACGCTCTCGGACGCCGACGACCTGTACCGAAAGGGGCGCCTGCAGGAGAGGGCGGCC
GTCGACTTCACCCTCCTCGGCGAGATGCGCAAGCCGCGCGAGGCGTCCTCGGCCACGGGCCTTGCCGACGCCAAC
ACAGAAGTGCCATGA
Gene >Hirsu2|9054
ATGGTGACGACTCCGGACCTCGCCATCGCCAAGGCCGCGCTCACGGCCACGCTTCTTCGCGCCGATCCCACGTCG
CTGAGTCGCGCCGCCATCGCCGAGTTCCTGCAGCTGCTCGACAACACGCTGGACGAGTGTTCGCGTCCCAACGTT
CAGGTTTGCTTCATGGCTCGACAGCCGCACCCGTTCGCCCTGGCCTGTTGACTAAATTGGACCCGCACAGAAATG
TAAGAACTGGATTGTCGCCAACGCGGCGGCCTCGAGTGGCCGGAATGCCACCCTGGGCAAGTATCTCGTCGCTCT
CTCCGAGAGCATGGAGACGGACTTTGACCGGCCGAGCGTCCGCCGCCGGAGGCTGCACGTGCTCTACGTCGCCAG
CGATGTGCTGCACCACGTCGTCACCCGCCAGGGGCTCCGTGACTTCTCCCGGGCCTGGGAGGCTCACCTGCCCGC
CGTCGTGGCCGCCGCCTCCACCTTCGAAAAGTACCCCAGGCACTTGGCCAAGGTGCGTGACCTGATTGCGCTCTG
GGAGGAGCGTGCCTACGTCCCGCCCGCCCTCGTGACCCGGATCCGAGAAGCCTTCACCCGTGCCTCGGACAAGGA
CTCGGGAACCCGCATCCAGATGTCCTCCGAGGCCCTCAAGCTCGCCAAGGAGGCCCCCTTCGTCCTCCCCGCCTC
GCACGGCGACGCCTCGGCGCCCTGGAGCGACCTGCCCGCCGCCTCCTGGCTGGCGCATCTGGATCCCAACTCTGC
CATGCCCATGAGCCGCTCTCTGCTGCGCCCCATCCAGCTCAGGCCGGGGCCTGCCAAGGAGGCGCTGGCCAAGCT
GGTCAAGGCCACGCTCTCGGACGCCGACGACCTGTACCGAAAGGGGCGCCTGCAGGAGAGGGCGGCCGTCGACTT
CACCCTCCTCGGCGAGATGCGCAAGCCGCGCGAGGCGTCCTCGGCCACGGGCCTTGCCGACGCCAACACGTACTG
GGGCTGGTCGCCGCAGCTCTGCTGCCGCATGAAGGAGCGGCAGAGAAGTGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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