© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9047 |
| Gene name | |
| Location | Contig_630:4627..5755 |
| Strand | + |
| Gene length (bp) | 1128 |
| Transcript length (bp) | 933 |
| Coding sequence length (bp) | 933 |
| Protein length (aa) | 311 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01670 | Glyco_hydro_12 | Glycosyl hydrolase family 12 | 1.0E-19 | 66 | 307 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|G4NAZ1|CE12A_MAGO7 | Endoglucanase cel12A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=cel12A PE=1 SV=1 | 64 | 308 | 2.0E-07 |
| sp|A1CRJ0|XGEA_ASPCL | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xgeA PE=3 SV=1 | 76 | 305 | 7.0E-07 |
| sp|Q2UK93|XGEA_ASPOR | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xgeA PE=3 SV=1 | 66 | 307 | 5.0E-06 |
| sp|B8N3L3|XGEA_ASPFN | Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=xgeA PE=3 SV=1 | 66 | 307 | 5.0E-06 |
| sp|P22669|GUN_ASPAC | Endoglucanase-1 OS=Aspergillus aculeatus PE=1 SV=1 | 64 | 308 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008810 | cellulase activity | Yes |
| GO:0000272 | polysaccharide catabolic process | Yes |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016052 | carbohydrate catabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0005976 | polysaccharide metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0009057 | macromolecule catabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9047 MFRWLVNVGFLALPVAATLGILLGLQMHRQSTGQAPLFGPPRDNKRVEKTYCQKSFGIHPDTRGLEYTLNPNQWA WDEGDPGFLCMNVTTNNNQTYASQTTAPPFRVFWQYPQATDGQPVHAFPNIKVEGDVLPAKLDSVKQMNIDMQWI MRLDNKTDAPTDVDELQTGNVNSNVAIDMFMDSDKSKAADSERAAYEVMVWFAAVGPATFAIGQKKGPIMSKILD GAHFYLYFDKNDRGQNVLTWKSSDIAHDFHGDISPLMNEILRTRREGFPSPSDYLGYFSFGSEAYHSDKPVTFSV PSLSIDIRKS* |
| Coding | >Hirsu2|9047 ATGTTCCGCTGGCTCGTCAACGTCGGCTTCCTGGCCCTGCCAGTGGCCGCCACGCTGGGCATCCTGCTGGGCCTC CAGATGCACCGCCAGTCCACCGGCCAGGCGCCGCTGTTCGGCCCGCCGCGGGACAACAAGAGGGTCGAGAAGACG TATTGTCAGAAGTCGTTTGGCATCCACCCCGACACGAGGGGCCTGGAATACACCCTAAACCCCAACCAATGGGCT TGGGACGAGGGCGACCCGGGCTTCCTGTGTATGAATGTGACGACGAACAACAACCAGACGTATGCGTCCCAGACG ACGGCGCCGCCGTTCCGAGTCTTCTGGCAATATCCCCAGGCCACCGACGGCCAGCCCGTGCACGCCTTCCCCAAC ATCAAGGTCGAGGGCGACGTGCTGCCGGCCAAGCTCGACAGCGTCAAGCAGATGAACATCGACATGCAGTGGATC ATGCGCCTCGACAACAAGACGGACGCCCCGACCGACGTCGACGAGCTGCAGACGGGCAACGTCAACTCCAACGTC GCCATCGACATGTTCATGGACAGCGACAAGTCCAAGGCGGCCGACAGCGAGCGCGCCGCCTACGAAGTCATGGTC TGGTTCGCCGCCGTCGGCCCGGCCACCTTTGCCATTGGCCAGAAAAAAGGCCCCATCATGTCCAAGATCCTGGAC GGAGCCCACTTTTATCTGTACTTTGACAAGAATGACCGGGGCCAGAACGTCCTGACCTGGAAATCGTCCGACATC GCCCACGACTTCCACGGCGACATCTCGCCCCTCATGAATGAGATTCTGCGCACCCGGAGGGAGGGCTTCCCCAGC CCCTCGGACTACCTCGGATACTTTAGTTTTGGCTCCGAAGCATACCACTCCGACAAGCCCGTCACATTTTCTGTA CCATCCCTGTCAATAGACATTCGCAAATCTTGA |
| Transcript | >Hirsu2|9047 ATGTTCCGCTGGCTCGTCAACGTCGGCTTCCTGGCCCTGCCAGTGGCCGCCACGCTGGGCATCCTGCTGGGCCTC CAGATGCACCGCCAGTCCACCGGCCAGGCGCCGCTGTTCGGCCCGCCGCGGGACAACAAGAGGGTCGAGAAGACG TATTGTCAGAAGTCGTTTGGCATCCACCCCGACACGAGGGGCCTGGAATACACCCTAAACCCCAACCAATGGGCT TGGGACGAGGGCGACCCGGGCTTCCTGTGTATGAATGTGACGACGAACAACAACCAGACGTATGCGTCCCAGACG ACGGCGCCGCCGTTCCGAGTCTTCTGGCAATATCCCCAGGCCACCGACGGCCAGCCCGTGCACGCCTTCCCCAAC ATCAAGGTCGAGGGCGACGTGCTGCCGGCCAAGCTCGACAGCGTCAAGCAGATGAACATCGACATGCAGTGGATC ATGCGCCTCGACAACAAGACGGACGCCCCGACCGACGTCGACGAGCTGCAGACGGGCAACGTCAACTCCAACGTC GCCATCGACATGTTCATGGACAGCGACAAGTCCAAGGCGGCCGACAGCGAGCGCGCCGCCTACGAAGTCATGGTC TGGTTCGCCGCCGTCGGCCCGGCCACCTTTGCCATTGGCCAGAAAAAAGGCCCCATCATGTCCAAGATCCTGGAC GGAGCCCACTTTTATCTGTACTTTGACAAGAATGACCGGGGCCAGAACGTCCTGACCTGGAAATCGTCCGACATC GCCCACGACTTCCACGGCGACATCTCGCCCCTCATGAATGAGATTCTGCGCACCCGGAGGGAGGGCTTCCCCAGC CCCTCGGACTACCTCGGATACTTTAGTTTTGGCTCCGAAGCATACCACTCCGACAAGCCCGTCACATTTTCTGTA CCATCCCTGTCAATAGACATTCGCAAATCTTGA |
| Gene | >Hirsu2|9047 ATGTTCCGCTGGCTCGTCAACGTCGGCTTCCTGGCCCTGCCAGTGGCCGCCACGCTGGGCATCCTGCTGGGCCTC CAGATGCACCGCCAGTCCACCGGCCAGGCGCCGCTGTTCGGCCCGCCGCGGGACAACAAGAGGGTCGAGAAGACG TATTGTCAGAAGTCGTTTGGCATCCACCCCGACACGAGGGGCCTGGAATACACCCGTCCGTCTCCCCCATCTTCC TCCGTCGCCTGGATTGCGCTGACCCGGCCGATGCTGCAGTAAACCCCAACCAATGGGCTTGGGACGAGGGCGACC CGGGCTTCCTGTGTATGAATGTGCGTGCAGAGGCCCCCCCCCTTGACCCCCTCGATGAGGCCGTGCTCAGACTCT TCAGGTGACGACGAACAACAACCAGACGTATGCGTCCCAGACGACGGCGCCGCCGTTCCGAGTCTTCTGGCAATA TCCCCAGGCCACCGACGGCCAGCCCGTGCACGCCTTCCCCAACATCAAGGTCGAGGGCGACGTGCTGCCGGCCAA GCTCGACAGCGTCAAGCAGATGAACATCGACATGCAGTGGATCATGCGCCTCGACAACAAGACGGACGCCCCGAC CGACGTCGACGAGCTGCAGACGGGCAACGTCAACTCCAACGTCGCCATCGACATGTTCATGGACAGCGACAAGTC CAAGGCGGCCGACAGCGAGCGCGCCGCCTACGAAGTCATGGTCTGGTTCGCCGCCGTCGGCCCGGCCACCTTTGC CATTGGCCAGAAAAAAGGCCCCATCATGTCCAAGATCCTGGACGGAGCCCACTTGTACGGCCGCCCCGTCCGCCC GCCCCCCCTCCCGTGCCCGTGCCGCGCCGGACGCTGACGATGCCTCCGCCCCGAAGTTATCTGTACTTTGACAAG AATGACCGGGGCCAGAACGTCCTGACCTGGAAATCGTCCGACATCGCCCACGACTTCCACGGCGACATCTCGCCC CTCATGAATGAGATTCTGCGCACCCGGAGGGAGGGCTTCCCCAGCCCCTCGGACTACCTCGGATACTTTAGTTTT GGCTCCGAAGCATACCACTCCGACAAGCCCGTCACATTTTCTGTACCATCCCTGTCAATAGACATTCGCAAATCT TGA |