Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9044
Gene name
LocationContig_63:41896..42304
Strand+
Gene length (bp)408
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0478 0.0809 0.813 0.4115 0.1103 0.0064 0.3916 0.0805 0.1556 0.0087

SignalP

SignalP signal predicted Location Score
Yes 1 - 15 0.999706

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10799
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9044 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9044
MRPSALLLLAVPALAQVPGDDLPESTSSSSSSLGGVATSSVSSSSTATTTSGSGTASGLPGGSGGLSNSSSTTTS
RSSSSRTALPSSTPSGGSSGGSGGSGSNGGSGSSGVSAAAVVPGTWLALSAVFAFAALQL*
Coding >Hirsu2|9044
ATGCGTCCCTCCGCACTCCTCCTCTTGGCCGTCCCTGCACTGGCCCAGGTTCCCGGTGATGATTTGCCTGAGTCC
ACGTCCAGCAGCAGCAGCAGCTTAGGAGGCGTGGCGACGTCGAGCGTCTCCTCCTCGTCCACAGCCACGACCACG
TCGGGATCCGGGACCGCCTCAGGCCTACCGGGTGGTTCGGGCGGCTTGTCCAACTCATCATCGACTACCACGTCA
CGAAGCTCCTCGTCGCGGACGGCCCTGCCATCTTCCACTCCCAGCGGCGGCTCTTCCGGAGGCAGTGGCGGTAGC
GGCAGCAACGGTGGCAGCGGCAGCTCGGGAGTTTCGGCCGCCGCCGTCGTCCCAGGCACCTGGCTGGCACTCAGC
GCCGTCTTCGCCTTTGCCGCATTGCAGCTTTGA
Transcript >Hirsu2|9044
ATGCGTCCCTCCGCACTCCTCCTCTTGGCCGTCCCTGCACTGGCCCAGGTTCCCGGTGATGATTTGCCTGAGTCC
ACGTCCAGCAGCAGCAGCAGCTTAGGAGGCGTGGCGACGTCGAGCGTCTCCTCCTCGTCCACAGCCACGACCACG
TCGGGATCCGGGACCGCCTCAGGCCTACCGGGTGGTTCGGGCGGCTTGTCCAACTCATCATCGACTACCACGTCA
CGAAGCTCCTCGTCGCGGACGGCCCTGCCATCTTCCACTCCCAGCGGCGGCTCTTCCGGAGGCAGTGGCGGTAGC
GGCAGCAACGGTGGCAGCGGCAGCTCGGGAGTTTCGGCCGCCGCCGTCGTCCCAGGCACCTGGCTGGCACTCAGC
GCCGTCTTCGCCTTTGCCGCATTGCAGCTTTGA
Gene >Hirsu2|9044
ATGCGTCCCTCCGCACTCCTCCTCTTGGCCGTCCCTGCACTGGCCCAGGTTCCCGGTGATGATTTGCCTGAGTCC
ACGTCCAGCAGCAGCAGCAGCTTAGGAGGCGTGGCGACGTCGAGCGTCTCCTCCTCGTCCACAGCCACGACCACG
TCGGGATCCGGGACCGCCTCAGGCCTACCGGGTGGTTCGGGCGGCTTGTCCAACTCATCATCGACTACCACGTCA
CGAAGCTCCTCGTCGCGGACGGCCCTGCCATCTTCCACTCCCAGCGGCGGCTCTTCCGGAGGCAGTGGCGGTAGC
GGCAGCAACGGTGGCAGCGGCAGCTCGGGAGTTTCGGCCGCCGCCGTCGTCCCAGGCACCTGGCTGGCACTCAGC
GCCGTCTTCGCCTTTGCCGCATTGCAGCTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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