© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|9039 |
| Gene name | |
| Location | Contig_63:21835..23644 |
| Strand | - |
| Gene length (bp) | 1809 |
| Transcript length (bp) | 1671 |
| Coding sequence length (bp) | 1671 |
| Protein length (aa) | 557 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.3E-33 | 113 | 481 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 93 | 527 | 5.0E-63 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 96 | 546 | 2.0E-58 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 66 | 554 | 8.0E-56 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 93 | 554 | 1.0E-55 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 68 | 545 | 2.0E-54 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 93 | 527 | 5.0E-63 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 96 | 546 | 2.0E-58 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 66 | 554 | 8.0E-56 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 93 | 554 | 1.0E-55 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 68 | 545 | 2.0E-54 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 93 | 554 | 5.0E-37 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 97 | 533 | 9.0E-35 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 54 | 555 | 3.0E-34 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 108 | 481 | 3.0E-33 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 97 | 317 | 4.0E-33 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 66 | 554 | 6.0E-32 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 53 | 554 | 2.0E-30 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 53 | 546 | 8.0E-28 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 98 | 304 | 9.0E-27 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 72 | 529 | 5.0E-26 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 97 | 311 | 1.0E-25 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 53 | 527 | 3.0E-25 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 94 | 527 | 6.0E-22 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 80 | 422 | 2.0E-19 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 65 | 549 | 3.0E-17 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 96 | 330 | 3.0E-17 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 58 | 354 | 3.0E-15 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 98 | 283 | 3.0E-14 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 97 | 354 | 9.0E-14 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 99 | 525 | 2.0E-12 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 53 | 313 | 6.0E-10 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 203 | 311 | 4.0E-09 |
| sp|Q0K843|SAUU_CUPNH | Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 | 99 | 303 | 2.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 106 | 125 | 19 |
| 2 | 145 | 167 | 22 |
| 3 | 174 | 196 | 22 |
| 4 | 200 | 222 | 22 |
| 5 | 234 | 256 | 22 |
| 6 | 266 | 288 | 22 |
| 7 | 335 | 357 | 22 |
| 8 | 377 | 399 | 22 |
| 9 | 406 | 425 | 19 |
| 10 | 429 | 451 | 22 |
| 11 | 464 | 486 | 22 |
| 12 | 501 | 518 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9039 LRSNSTLLKADDGGGGGGGGGASPSLLPLPPPAAPGCRLGAAAVMAKPGRRPSEAELPIGSVEALDDASSLHRAA ERGRAATDKYGEPLLRYDAAAERRLRFKIDLCIIPTVSILYLFCFIDRANLGNAKIAGLDKDLGLKGYDYNSVIS VFYISYILFEIPCNILCKWMGPGWFLPLTAVLFGLTSLGTAFVRSLPQAMGVRFLLGVFEAGMMPGIAYYLSRWY RRAELAFRLSLYIVMAPLAGAFGGLLASAILSLEHFGGLRTWRMIFAIEGIITVGLGLVSLLTLTDRPATARWLT AREKDLAIARVKSERIGATALLDKIDRTKLLRGILCPVTLGTSFIFLLNNVTVQGLAFFAPTIVKTIYADETLVK QQLYTVPPYAVGAFFTLLFPLLSWRTDRRQIFIILSTPLVIVGYCMFLGSHNPSVRYAAAFLVASSTFTMGPLTN AQVSANVVSDTARSAAIGTNIMMGNIGGLISGWSFLPWDAPDYRIGNGLNLATASTILIVSILIMCWLHRDNERR RRHDADTQLQGLTPDQIEDLDWKHPAFQWKT* |
| Coding | >Hirsu2|9039 CTGCGCAGCAACAGCACCTTGCTCAAGGCCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGTCCCCCTCG CTCCTCCCCCTCCCGCCCCCGGCTGCCCCCGGCTGCCGCCTCGGCGCAGCAGCCGTGATGGCCAAGCCCGGCCGC CGGCCGTCCGAGGCCGAGCTGCCGATCGGCAGCGTCGAGGCGCTCGACGACGCCTCGTCGCTGCACCGCGCGGCC GAGCGCGGCCGCGCCGCGACCGATAAATACGGCGAGCCGCTGCTGCGGTACGACGCCGCGGCCGAGAGACGGCTC CGGTTCAAGATCGACCTGTGCATCATCCCCACCGTCTCCATCCTCTACCTCTTCTGCTTCATCGACCGCGCCAAT CTGGGCAACGCCAAGATCGCCGGGCTCGACAAGGACCTCGGCCTGAAGGGCTACGACTACAACAGCGTCATCTCC GTCTTCTACATCTCCTACATCCTCTTCGAGATCCCCTGCAACATCCTGTGCAAGTGGATGGGCCCCGGCTGGTTT CTGCCGCTGACGGCCGTCCTCTTCGGCCTCACCTCGCTCGGGACCGCCTTCGTCCGCAGCCTGCCGCAGGCCATG GGCGTGCGCTTCCTGCTCGGCGTCTTCGAGGCCGGCATGATGCCCGGAATCGCCTACTACCTGTCGCGCTGGTAC CGGCGCGCCGAGCTGGCCTTCCGCCTGTCGCTGTACATCGTCATGGCGCCCCTGGCCGGCGCCTTCGGCGGCCTG CTGGCCTCGGCCATCCTGAGCCTCGAGCACTTCGGCGGCCTGCGCACCTGGCGCATGATCTTCGCCATCGAGGGC ATCATCACCGTCGGCCTCGGCCTCGTCTCGCTCCTGACCCTGACCGACCGGCCCGCCACGGCCCGCTGGCTGACG GCCCGGGAGAAGGACCTGGCCATCGCCCGCGTCAAGTCGGAGCGCATCGGCGCCACCGCCCTGCTCGACAAGATC GACCGCACCAAGCTGCTCCGCGGCATCCTGTGCCCCGTCACCCTCGGCACCTCCTTCATCTTCCTCCTCAACAAC GTCACCGTCCAGGGGCTGGCCTTCTTCGCGCCCACCATCGTCAAGACCATCTACGCCGACGAGACGCTCGTCAAG CAGCAGCTCTACACGGTGCCGCCCTACGCCGTCGGCGCCTTCTTCACCCTGCTCTTCCCCCTCCTCAGCTGGCGC ACCGACCGCCGCCAGATCTTCATCATCCTCTCCACGCCCCTCGTCATCGTCGGCTACTGCATGTTCCTCGGCTCG CACAACCCGTCCGTCCGCTACGCCGCCGCCTTCCTCGTCGCCTCCTCCACCTTCACCATGGGGCCGCTCACCAAC GCCCAGGTGTCGGCCAACGTCGTCAGCGACACGGCCCGCAGCGCCGCCATCGGCACCAACATCATGATGGGCAAC ATCGGCGGCCTCATCAGCGGTTGGTCCTTCCTGCCTTGGGACGCCCCGGACTATCGCATCGGCAACGGCCTCAAC CTGGCGACGGCCAGCACCATCCTCATCGTCAGCATCCTCATCATGTGCTGGCTGCACAGGGACAACGAGAGGCGC CGCCGCCACGACGCCGACACGCAGCTGCAGGGCCTGACCCCGGACCAGATCGAGGACCTCGACTGGAAGCATCCC GCCTTCCAGTGGAAAACGTAA |
| Transcript | >Hirsu2|9039 CTGCGCAGCAACAGCACCTTGCTCAAGGCCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGTCCCCCTCG CTCCTCCCCCTCCCGCCCCCGGCTGCCCCCGGCTGCCGCCTCGGCGCAGCAGCCGTGATGGCCAAGCCCGGCCGC CGGCCGTCCGAGGCCGAGCTGCCGATCGGCAGCGTCGAGGCGCTCGACGACGCCTCGTCGCTGCACCGCGCGGCC GAGCGCGGCCGCGCCGCGACCGATAAATACGGCGAGCCGCTGCTGCGGTACGACGCCGCGGCCGAGAGACGGCTC CGGTTCAAGATCGACCTGTGCATCATCCCCACCGTCTCCATCCTCTACCTCTTCTGCTTCATCGACCGCGCCAAT CTGGGCAACGCCAAGATCGCCGGGCTCGACAAGGACCTCGGCCTGAAGGGCTACGACTACAACAGCGTCATCTCC GTCTTCTACATCTCCTACATCCTCTTCGAGATCCCCTGCAACATCCTGTGCAAGTGGATGGGCCCCGGCTGGTTT CTGCCGCTGACGGCCGTCCTCTTCGGCCTCACCTCGCTCGGGACCGCCTTCGTCCGCAGCCTGCCGCAGGCCATG GGCGTGCGCTTCCTGCTCGGCGTCTTCGAGGCCGGCATGATGCCCGGAATCGCCTACTACCTGTCGCGCTGGTAC CGGCGCGCCGAGCTGGCCTTCCGCCTGTCGCTGTACATCGTCATGGCGCCCCTGGCCGGCGCCTTCGGCGGCCTG CTGGCCTCGGCCATCCTGAGCCTCGAGCACTTCGGCGGCCTGCGCACCTGGCGCATGATCTTCGCCATCGAGGGC ATCATCACCGTCGGCCTCGGCCTCGTCTCGCTCCTGACCCTGACCGACCGGCCCGCCACGGCCCGCTGGCTGACG GCCCGGGAGAAGGACCTGGCCATCGCCCGCGTCAAGTCGGAGCGCATCGGCGCCACCGCCCTGCTCGACAAGATC GACCGCACCAAGCTGCTCCGCGGCATCCTGTGCCCCGTCACCCTCGGCACCTCCTTCATCTTCCTCCTCAACAAC GTCACCGTCCAGGGGCTGGCCTTCTTCGCGCCCACCATCGTCAAGACCATCTACGCCGACGAGACGCTCGTCAAG CAGCAGCTCTACACGGTGCCGCCCTACGCCGTCGGCGCCTTCTTCACCCTGCTCTTCCCCCTCCTCAGCTGGCGC ACCGACCGCCGCCAGATCTTCATCATCCTCTCCACGCCCCTCGTCATCGTCGGCTACTGCATGTTCCTCGGCTCG CACAACCCGTCCGTCCGCTACGCCGCCGCCTTCCTCGTCGCCTCCTCCACCTTCACCATGGGGCCGCTCACCAAC GCCCAGGTGTCGGCCAACGTCGTCAGCGACACGGCCCGCAGCGCCGCCATCGGCACCAACATCATGATGGGCAAC ATCGGCGGCCTCATCAGCGGTTGGTCCTTCCTGCCTTGGGACGCCCCGGACTATCGCATCGGCAACGGCCTCAAC CTGGCGACGGCCAGCACCATCCTCATCGTCAGCATCCTCATCATGTGCTGGCTGCACAGGGACAACGAGAGGCGC CGCCGCCACGACGCCGACACGCAGCTGCAGGGCCTGACCCCGGACCAGATCGAGGACCTCGACTGGAAGCATCCC GCCTTCCAGTGGAAAACGTAA |
| Gene | >Hirsu2|9039 CTGCGCAGCAACAGCACCTTGCTCAAGGCCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGTCCCCCTCG CTCCTCCCCCTCCCGCCCCCGGCTGCCCCCGGCTGCCGCCTCGGCGCAGCAGCCGTGATGGCCAAGCCCGGCCGC CGGCCGTCCGAGGCCGAGCTGCCGATCGGCAGCGTCGAGGCGCTCGACGACGCCTCGTCGCTGCACCGCGCGGCC GAGCGCGGCCGCGCCGCGACCGATAAGTACGGGGCCGAGATGCCGGCCGGGCTGAGCGATGGCTGACCTGCCGGC TCCCTTCTGCGCAGATACGGCGAGCCGCTGCTGCGGTACGACGCCGCGGCCGAGAGACGGCTCCGGTTCAAGATC GACCTGTGCATCATCCCCACCGTCTCCATCCTCTACCTCTTCTGCTTCATCGACCGCGCCAATCTGGGTAGGCAG CTCGGTCCGGGACGGAGTGGGTGGGTGAGTGGGCGAGCGACTTGACTGACTGACGCCTCTCGTGCAGGCAACGCC AAGATCGCCGGGCTCGACAAGGACCTCGGCCTGAAGGGCTACGACTACAACAGCGTCATCTCCGTCTTCTACATC TCCTACATCCTCTTCGAGATCCCCTGCAACATCCTGTGCAAGTGGATGGGCCCCGGCTGGTTTCTGCCGCTGACG GCCGTCCTCTTCGGCCTCACCTCGCTCGGGACCGCCTTCGTCCGCAGCCTGCCGCAGGCCATGGGCGTGCGCTTC CTGCTCGGCGTCTTCGAGGCCGGCATGATGCCCGGAATCGCCTACTACCTGTCGCGCTGGTACCGGCGCGCCGAG CTGGCCTTCCGCCTGTCGCTGTACATCGTCATGGCGCCCCTGGCCGGCGCCTTCGGCGGCCTGCTGGCCTCGGCC ATCCTGAGCCTCGAGCACTTCGGCGGCCTGCGCACCTGGCGCATGATCTTCGCCATCGAGGGCATCATCACCGTC GGCCTCGGCCTCGTCTCGCTCCTGACCCTGACCGACCGGCCCGCCACGGCCCGCTGGCTGACGGCCCGGGAGAAG GACCTGGCCATCGCCCGCGTCAAGTCGGAGCGCATCGGCGCCACCGCCCTGCTCGACAAGATCGACCGCACCAAG CTGCTCCGCGGCATCCTGTGCCCCGTCACCCTCGGCACCTCCTTCATCTTCCTCCTCAACAACGTCACCGTCCAG GGGCTGGCCTTCTTCGCGCCCACCATCGTCAAGACCATCTACGCCGACGAGACGCTCGTCAAGCAGCAGCTCTAC ACGGTGCCGCCCTACGCCGTCGGCGCCTTCTTCACCCTGCTCTTCCCCCTCCTCAGCTGGCGCACCGACCGCCGC CAGATCTTCATCATCCTCTCCACGCCCCTCGTCATCGTCGGCTACTGCATGTTCCTCGGCTCGCACAACCCGTCC GTCCGCTACGCCGCCGCCTTCCTCGTCGCCTCCTCCACCTTCACCATGGGGCCGCTCACCAACGCCCAGGTGTCG GCCAACGTCGTCAGCGACACGGCCCGCAGCGCCGCCATCGGCACCAACATCATGATGGGCAACATCGGCGGCCTC ATCAGCGGTTGGTCCTTCCTGCCTTGGGACGCCCCGGACTATCGCATCGGCAACGGCCTCAACCTGGCGACGGCC AGCACCATCCTCATCGTCAGCATCCTCATCATGTGCTGGCTGCACAGGGACAACGAGAGGCGCCGCCGCCACGAC GCCGACACGCAGCTGCAGGGCCTGACCCCGGACCAGATCGAGGACCTCGACTGGAAGCATCCCGCCTTCCAGTGG AAAACGTAA |