© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|9004 |
| Gene name | |
| Location | Contig_624:4278..6255 |
| Strand | + |
| Gene length (bp) | 1977 |
| Transcript length (bp) | 1977 |
| Coding sequence length (bp) | 1977 |
| Protein length (aa) | 659 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1831 | 0.1285 | 0.839 | 0.163 | 0.0817 | 0.0897 | 0.3861 | 0.2708 | 0.2463 | 0.0225 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 29 | 0.999689 |
| Orthofinder run ID | 4 |
| Orthogroup | 10789 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|9004 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9004 MKLHSLRLVCPSLLWLLVLVLSSASLSQRVPITNSTIGRAGETIITAQIESIIGSIKNLTTKAETADTIEKVHEV VDKASLAFHKANADAYELALISDRTPSSTFDKGWQKYVNVLVDVAGAVMVAYSSLFSAYDKGVKKNIDELNRILD RVADRQTYHEQIEPYSDAAAGLGMQVSITLDFMDAKDSLISEEWDPFWRVTKESEQKALDRSYKALTAVQKVVLE VYDGMKVQLSSFVRGMVDGFIVLNRIRAKIWDNIEEDENEERQQALDDETDQTLELAKEALWEMAPGAPYIKAYN AIVNGEEIGFWGWFEIVAEIGLELLALLTGGAGQAIKYAAKSLKVTARTIRVCGRVAKIASRVNKVAVGASKVSK VSRVGKVGKAGKAGKADKKSKLGKSCDGGSAELVDKISGTLENVLASSELVPLNDSSPSPQLNLATLLDISNEEG MSTQHIPSDDKIRSILKSLDAARVEDEFTVETTKRVCTPLKPLEASLLGTPRPNCRMVKTRERRPRPTTKEKRAP TETLGESRQIEAPQRRSVVARQANQQELAKDLQAYSNRLEGDEFDADLAGRILARADDEFAEMEDELDGMEQGAD KLARRDKASAPEGGGFGFLDNEKLANDFMAQFTVVTHNVTDPFAWTEVQDGPAEKVDR* |
| Coding | >Hirsu2|9004 ATGAAGCTTCACTCGCTACGCCTGGTCTGCCCGTCGCTGTTGTGGCTGCTGGTTCTCGTCCTGAGCTCAGCTAGC CTGTCGCAACGGGTCCCGATTACAAATTCGACGATTGGCCGCGCTGGGGAAACGATCATAACCGCTCAAATCGAG TCGATAATTGGGAGTATCAAGAATTTGACCACCAAGGCCGAAACAGCCGATACAATCGAAAAGGTGCATGAGGTA GTCGACAAAGCCTCACTGGCATTCCACAAGGCAAACGCAGACGCATACGAGCTCGCCCTGATCAGCGACCGGACG CCCAGCTCAACCTTCGACAAGGGGTGGCAGAAGTATGTCAACGTCCTGGTAGATGTAGCAGGCGCTGTCATGGTT GCCTACTCGTCCTTGTTCAGTGCGTACGACAAGGGCGTAAAGAAAAACATCGACGAGTTGAACAGGATACTCGAC AGAGTGGCCGACCGACAAACATACCATGAGCAAATCGAGCCCTACTCGGATGCAGCTGCCGGGCTTGGAATGCAA GTCAGCATCACCCTCGACTTCATGGATGCGAAAGACAGCCTAATCTCGGAAGAATGGGACCCTTTCTGGCGAGTG ACGAAAGAATCAGAGCAGAAAGCCCTCGATCGATCCTATAAGGCACTGACTGCGGTGCAAAAAGTCGTGCTGGAG GTCTACGATGGCATGAAAGTGCAGCTCAGCAGCTTCGTGCGCGGCATGGTGGATGGCTTCATCGTCCTCAACAGG ATCCGGGCCAAGATCTGGGACAACATCGAAGAGGATGAGAATGAAGAGCGTCAGCAGGCCCTTGACGACGAGACG GATCAGACTCTCGAGCTCGCAAAAGAAGCGCTTTGGGAAATGGCGCCGGGAGCGCCGTATATCAAAGCTTACAAC GCCATCGTAAACGGCGAGGAAATCGGCTTCTGGGGCTGGTTCGAAATCGTGGCCGAAATCGGGCTCGAACTTCTC GCCTTGTTGACCGGCGGCGCAGGCCAGGCGATAAAGTATGCGGCCAAGTCGTTGAAGGTGACGGCCAGGACGATC CGGGTCTGCGGGCGCGTCGCCAAGATTGCTTCGAGGGTCAACAAGGTGGCCGTTGGGGCGAGCAAGGTGAGCAAG GTGAGCAGGGTGGGCAAGGTGGGCAAGGCCGGCAAGGCCGGCAAGGCCGACAAGAAGAGCAAGCTCGGCAAGTCG TGCGACGGCGGCAGCGCCGAGCTGGTCGACAAGATTTCCGGCACTCTGGAAAACGTCCTGGCCAGTTCCGAGCTC GTGCCCCTAAATGACAGCAGCCCGTCGCCCCAGCTGAACCTGGCCACGCTTCTCGACATCTCCAACGAGGAGGGC ATGTCGACGCAGCACATCCCCAGCGATGACAAGATCAGGTCGATCCTAAAGTCCCTCGACGCAGCGAGAGTCGAG GACGAGTTCACCGTCGAGACGACGAAGAGAGTCTGCACCCCCCTGAAGCCTTTGGAAGCGTCGCTCCTGGGCACG CCACGGCCAAACTGCCGAATGGTCAAGACACGGGAGCGGAGGCCGAGGCCGACAACGAAGGAGAAGAGGGCGCCG ACAGAGACGCTGGGGGAAAGCCGGCAGATAGAAGCGCCCCAAAGGCGATCCGTCGTCGCCCGCCAGGCGAACCAG CAGGAGCTGGCCAAGGACCTGCAAGCTTACTCTAACCGGCTCGAGGGGGACGAGTTCGACGCAGACCTTGCCGGG CGTATCCTTGCCCGGGCCGACGACGAGTTCGCCGAGATGGAAGACGAGCTCGACGGCATGGAGCAAGGAGCGGAC AAGCTTGCACGGCGAGACAAGGCCTCGGCACCGGAAGGCGGCGGTTTCGGATTCCTCGACAACGAGAAGCTCGCG AATGATTTCATGGCCCAGTTCACTGTCGTCACGCACAACGTCACCGATCCTTTTGCCTGGACCGAGGTCCAAGAC GGTCCAGCCGAGAAGGTAGACAGATAG |
| Transcript | >Hirsu2|9004 ATGAAGCTTCACTCGCTACGCCTGGTCTGCCCGTCGCTGTTGTGGCTGCTGGTTCTCGTCCTGAGCTCAGCTAGC CTGTCGCAACGGGTCCCGATTACAAATTCGACGATTGGCCGCGCTGGGGAAACGATCATAACCGCTCAAATCGAG TCGATAATTGGGAGTATCAAGAATTTGACCACCAAGGCCGAAACAGCCGATACAATCGAAAAGGTGCATGAGGTA GTCGACAAAGCCTCACTGGCATTCCACAAGGCAAACGCAGACGCATACGAGCTCGCCCTGATCAGCGACCGGACG CCCAGCTCAACCTTCGACAAGGGGTGGCAGAAGTATGTCAACGTCCTGGTAGATGTAGCAGGCGCTGTCATGGTT GCCTACTCGTCCTTGTTCAGTGCGTACGACAAGGGCGTAAAGAAAAACATCGACGAGTTGAACAGGATACTCGAC AGAGTGGCCGACCGACAAACATACCATGAGCAAATCGAGCCCTACTCGGATGCAGCTGCCGGGCTTGGAATGCAA GTCAGCATCACCCTCGACTTCATGGATGCGAAAGACAGCCTAATCTCGGAAGAATGGGACCCTTTCTGGCGAGTG ACGAAAGAATCAGAGCAGAAAGCCCTCGATCGATCCTATAAGGCACTGACTGCGGTGCAAAAAGTCGTGCTGGAG GTCTACGATGGCATGAAAGTGCAGCTCAGCAGCTTCGTGCGCGGCATGGTGGATGGCTTCATCGTCCTCAACAGG ATCCGGGCCAAGATCTGGGACAACATCGAAGAGGATGAGAATGAAGAGCGTCAGCAGGCCCTTGACGACGAGACG GATCAGACTCTCGAGCTCGCAAAAGAAGCGCTTTGGGAAATGGCGCCGGGAGCGCCGTATATCAAAGCTTACAAC GCCATCGTAAACGGCGAGGAAATCGGCTTCTGGGGCTGGTTCGAAATCGTGGCCGAAATCGGGCTCGAACTTCTC GCCTTGTTGACCGGCGGCGCAGGCCAGGCGATAAAGTATGCGGCCAAGTCGTTGAAGGTGACGGCCAGGACGATC CGGGTCTGCGGGCGCGTCGCCAAGATTGCTTCGAGGGTCAACAAGGTGGCCGTTGGGGCGAGCAAGGTGAGCAAG GTGAGCAGGGTGGGCAAGGTGGGCAAGGCCGGCAAGGCCGGCAAGGCCGACAAGAAGAGCAAGCTCGGCAAGTCG TGCGACGGCGGCAGCGCCGAGCTGGTCGACAAGATTTCCGGCACTCTGGAAAACGTCCTGGCCAGTTCCGAGCTC GTGCCCCTAAATGACAGCAGCCCGTCGCCCCAGCTGAACCTGGCCACGCTTCTCGACATCTCCAACGAGGAGGGC ATGTCGACGCAGCACATCCCCAGCGATGACAAGATCAGGTCGATCCTAAAGTCCCTCGACGCAGCGAGAGTCGAG GACGAGTTCACCGTCGAGACGACGAAGAGAGTCTGCACCCCCCTGAAGCCTTTGGAAGCGTCGCTCCTGGGCACG CCACGGCCAAACTGCCGAATGGTCAAGACACGGGAGCGGAGGCCGAGGCCGACAACGAAGGAGAAGAGGGCGCCG ACAGAGACGCTGGGGGAAAGCCGGCAGATAGAAGCGCCCCAAAGGCGATCCGTCGTCGCCCGCCAGGCGAACCAG CAGGAGCTGGCCAAGGACCTGCAAGCTTACTCTAACCGGCTCGAGGGGGACGAGTTCGACGCAGACCTTGCCGGG CGTATCCTTGCCCGGGCCGACGACGAGTTCGCCGAGATGGAAGACGAGCTCGACGGCATGGAGCAAGGAGCGGAC AAGCTTGCACGGCGAGACAAGGCCTCGGCACCGGAAGGCGGCGGTTTCGGATTCCTCGACAACGAGAAGCTCGCG AATGATTTCATGGCCCAGTTCACTGTCGTCACGCACAACGTCACCGATCCTTTTGCCTGGACCGAGGTCCAAGAC GGTCCAGCCGAGAAGGTAGACAGATAG |
| Gene | >Hirsu2|9004 ATGAAGCTTCACTCGCTACGCCTGGTCTGCCCGTCGCTGTTGTGGCTGCTGGTTCTCGTCCTGAGCTCAGCTAGC CTGTCGCAACGGGTCCCGATTACAAATTCGACGATTGGCCGCGCTGGGGAAACGATCATAACCGCTCAAATCGAG TCGATAATTGGGAGTATCAAGAATTTGACCACCAAGGCCGAAACAGCCGATACAATCGAAAAGGTGCATGAGGTA GTCGACAAAGCCTCACTGGCATTCCACAAGGCAAACGCAGACGCATACGAGCTCGCCCTGATCAGCGACCGGACG CCCAGCTCAACCTTCGACAAGGGGTGGCAGAAGTATGTCAACGTCCTGGTAGATGTAGCAGGCGCTGTCATGGTT GCCTACTCGTCCTTGTTCAGTGCGTACGACAAGGGCGTAAAGAAAAACATCGACGAGTTGAACAGGATACTCGAC AGAGTGGCCGACCGACAAACATACCATGAGCAAATCGAGCCCTACTCGGATGCAGCTGCCGGGCTTGGAATGCAA GTCAGCATCACCCTCGACTTCATGGATGCGAAAGACAGCCTAATCTCGGAAGAATGGGACCCTTTCTGGCGAGTG ACGAAAGAATCAGAGCAGAAAGCCCTCGATCGATCCTATAAGGCACTGACTGCGGTGCAAAAAGTCGTGCTGGAG GTCTACGATGGCATGAAAGTGCAGCTCAGCAGCTTCGTGCGCGGCATGGTGGATGGCTTCATCGTCCTCAACAGG ATCCGGGCCAAGATCTGGGACAACATCGAAGAGGATGAGAATGAAGAGCGTCAGCAGGCCCTTGACGACGAGACG GATCAGACTCTCGAGCTCGCAAAAGAAGCGCTTTGGGAAATGGCGCCGGGAGCGCCGTATATCAAAGCTTACAAC GCCATCGTAAACGGCGAGGAAATCGGCTTCTGGGGCTGGTTCGAAATCGTGGCCGAAATCGGGCTCGAACTTCTC GCCTTGTTGACCGGCGGCGCAGGCCAGGCGATAAAGTATGCGGCCAAGTCGTTGAAGGTGACGGCCAGGACGATC CGGGTCTGCGGGCGCGTCGCCAAGATTGCTTCGAGGGTCAACAAGGTGGCCGTTGGGGCGAGCAAGGTGAGCAAG GTGAGCAGGGTGGGCAAGGTGGGCAAGGCCGGCAAGGCCGGCAAGGCCGACAAGAAGAGCAAGCTCGGCAAGTCG TGCGACGGCGGCAGCGCCGAGCTGGTCGACAAGATTTCCGGCACTCTGGAAAACGTCCTGGCCAGTTCCGAGCTC GTGCCCCTAAATGACAGCAGCCCGTCGCCCCAGCTGAACCTGGCCACGCTTCTCGACATCTCCAACGAGGAGGGC ATGTCGACGCAGCACATCCCCAGCGATGACAAGATCAGGTCGATCCTAAAGTCCCTCGACGCAGCGAGAGTCGAG GACGAGTTCACCGTCGAGACGACGAAGAGAGTCTGCACCCCCCTGAAGCCTTTGGAAGCGTCGCTCCTGGGCACG CCACGGCCAAACTGCCGAATGGTCAAGACACGGGAGCGGAGGCCGAGGCCGACAACGAAGGAGAAGAGGGCGCCG ACAGAGACGCTGGGGGAAAGCCGGCAGATAGAAGCGCCCCAAAGGCGATCCGTCGTCGCCCGCCAGGCGAACCAG CAGGAGCTGGCCAAGGACCTGCAAGCTTACTCTAACCGGCTCGAGGGGGACGAGTTCGACGCAGACCTTGCCGGG CGTATCCTTGCCCGGGCCGACGACGAGTTCGCCGAGATGGAAGACGAGCTCGACGGCATGGAGCAAGGAGCGGAC AAGCTTGCACGGCGAGACAAGGCCTCGGCACCGGAAGGCGGCGGTTTCGGATTCCTCGACAACGAGAAGCTCGCG AATGATTTCATGGCCCAGTTCACTGTCGTCACGCACAACGTCACCGATCCTTTTGCCTGGACCGAGGTCCAAGAC GGTCCAGCCGAGAAGGTAGACAGATAG |