© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8980 |
| Gene name | |
| Location | Contig_620:7121..8161 |
| Strand | + |
| Gene length (bp) | 1040 |
| Transcript length (bp) | 864 |
| Coding sequence length (bp) | 864 |
| Protein length (aa) | 288 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20237 | DUF6594 | Family of unknown function (DUF6594) | 3.3E-59 | 20 | 273 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 207 | 229 | 22 |
| 2 | 236 | 256 | 20 |
| 3 | 261 | 283 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8980 MHGSVSGGLPSERKEGFADVARWVALDNDHETFIYRRFNELAARNLLYMQAELLVLEKQLDELDRRDANSDDMDL KDAIRTWETLSQQYDNGGEEARVRMDLIVRTRAKLKEYHEALLLQSEMAKLKRPNRRVTDAYRQWFKKPYPALGE RAKTFLDASDDLVGLNTSETDHLSRFLRRHWPAKAKRSRDGHHLIGRFNEQSISVAVGVITILVAAVLLVGSIIS LYFVSSNAAKLGMVAAFTAAFALSVGLTTNGSRAEIFAATAAYAAVLVVFVSGNITGSQKSS* |
| Coding | >Hirsu2|8980 ATGCATGGCAGTGTCAGCGGTGGCCTTCCGAGTGAGCGGAAAGAGGGCTTTGCCGACGTCGCAAGATGGGTCGCG CTCGACAACGACCATGAGACCTTCATCTACCGCAGATTCAATGAGCTGGCCGCTCGAAACTTGCTGTACATGCAG GCCGAGCTGCTTGTTCTCGAGAAGCAGCTCGACGAGCTGGACAGGAGGGATGCCAACAGCGACGACATGGACTTG AAGGACGCCATCCGGACGTGGGAGACGCTGAGCCAGCAGTACGATAATGGGGGCGAAGAGGCCCGGGTCCGAATG GACCTGATTGTGAGGACGCGTGCCAAGTTGAAAGAGTATCACGAGGCACTCTTGTTGCAGAGCGAGATGGCCAAG CTGAAGCGGCCCAACAGACGCGTGACTGACGCGTACAGGCAGTGGTTCAAGAAGCCGTACCCGGCGCTGGGCGAG CGGGCCAAGACGTTCCTGGATGCTTCAGACGACCTTGTTGGCCTCAATACGTCAGAGACCGACCATCTCTCGCGC TTCCTGAGGCGGCACTGGCCAGCCAAGGCAAAGCGATCGCGGGACGGCCATCACCTCATCGGACGATTCAACGAA CAGTCCATCTCGGTCGCAGTCGGCGTCATCACCATTCTTGTGGCCGCGGTCCTTCTGGTCGGCTCCATCATCAGC CTGTACTTCGTCTCCAGCAATGCGGCCAAGCTCGGCATGGTGGCCGCCTTCACGGCTGCGTTTGCGTTGAGCGTC GGCTTGACGACGAACGGGAGTCGCGCCGAAATTTTTGCGGCTACGGCAGCGTACGCGGCTGTGCTTGTGGTGTTT GTGAGTGGCAACATCACCGGCTCCCAGAAGAGCAGTTGA |
| Transcript | >Hirsu2|8980 ATGCATGGCAGTGTCAGCGGTGGCCTTCCGAGTGAGCGGAAAGAGGGCTTTGCCGACGTCGCAAGATGGGTCGCG CTCGACAACGACCATGAGACCTTCATCTACCGCAGATTCAATGAGCTGGCCGCTCGAAACTTGCTGTACATGCAG GCCGAGCTGCTTGTTCTCGAGAAGCAGCTCGACGAGCTGGACAGGAGGGATGCCAACAGCGACGACATGGACTTG AAGGACGCCATCCGGACGTGGGAGACGCTGAGCCAGCAGTACGATAATGGGGGCGAAGAGGCCCGGGTCCGAATG GACCTGATTGTGAGGACGCGTGCCAAGTTGAAAGAGTATCACGAGGCACTCTTGTTGCAGAGCGAGATGGCCAAG CTGAAGCGGCCCAACAGACGCGTGACTGACGCGTACAGGCAGTGGTTCAAGAAGCCGTACCCGGCGCTGGGCGAG CGGGCCAAGACGTTCCTGGATGCTTCAGACGACCTTGTTGGCCTCAATACGTCAGAGACCGACCATCTCTCGCGC TTCCTGAGGCGGCACTGGCCAGCCAAGGCAAAGCGATCGCGGGACGGCCATCACCTCATCGGACGATTCAACGAA CAGTCCATCTCGGTCGCAGTCGGCGTCATCACCATTCTTGTGGCCGCGGTCCTTCTGGTCGGCTCCATCATCAGC CTGTACTTCGTCTCCAGCAATGCGGCCAAGCTCGGCATGGTGGCCGCCTTCACGGCTGCGTTTGCGTTGAGCGTC GGCTTGACGACGAACGGGAGTCGCGCCGAAATTTTTGCGGCTACGGCAGCGTACGCGGCTGTGCTTGTGGTGTTT GTGAGTGGCAACATCACCGGCTCCCAGAAGAGCAGTTGA |
| Gene | >Hirsu2|8980 ATGCATGGCAGTGTCAGCGGTGGCCTTCCGAGTGAGCGGAAAGAGGGCTTTGCCGACGTCGCAAGATGGGTCGCG CTCGACAACGACCATGAGACCTTCATCTACCGCAGATTCAATGAGCTGGCCGCTCGAAACTTGCTGTACATGCAG GCCGAGCTGCTTGTTCTCGAGAAGCAGCTCGACGAGCTGGACAGGAGGGATGCCAACAGCGACGACATGGACTTG AAGGACGCCATCCGGACGTGGGAGACGCTGAGCCAGCAGTACGATAATGGGGGCGAAGAGGCCCGGGTCCGAATG GACCTGATTGTGAGGACGCGTGCCAAGTTGAAAGAGTATCGTGCGTTGGAAGCCGTGAGCCGACCTGACGAAGCA CGGGATGACTGACGCTTTCGTAGACGAGGCACTCTTGTTGCAGAGCGAGATGGCCAAGCTGAAGCGGCCCAACAG ACGCGTGACTGACGCGTACAGGCAGTGGTTCAAGAAGCCGTACCCGGCGCTGGGCGAGCGGGCCAAGACGTTCCT GGATGCTTCAGACGACCTTGTTGGCCTCAATACGTCAGAGACCGACCATCTCTCGCGCTTCCTGAGGCGGCACTG GCCAGCCAAGGCAAGTATTCCCAACCACCGTCGTATGCCGAGCTTCAGGACCATCTACTCACGTGCCGCAGCAAG AGCGATCGCGGGACGGCCATCACCTCATCGGACGATTCAACGAACAGTCCATCTCGGTCGCAGTCGGCGTCATCA CCATTCTTGTGGCCGCGGTCCTTCTGGTCGGCTCCATCATCAGCCTGTACTTCGTCTCCAGCAATGCGGCCAAGC TCGGCATGGTGGCCGCCTTCACGGCTGCGTTTGCGTTGAGCGTCGGCTTGACGACGAACGGGAGTCGCGCCGAAA TTTTTGCGGCTACGGCAGCGTGAGTTCGACGATGGCGGCGGTATGGAGAGCCGTGCAGTTACTGACTCGATCTCA GGTACGCGGCTGTGCTTGTGGTGTTTGTGAGTGGCAACATCACCGGCTCCCAGAAGAGCAGTTGA |