Protein ID | Hirsu2|8979 |
Gene name | |
Location | Contig_620:4258..6555 |
Strand | - |
Gene length (bp) | 2297 |
Transcript length (bp) | 2250 |
Coding sequence length (bp) | 2250 |
Protein length (aa) | 750 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13650 | Asp_protease_2 | Aspartyl protease | 8.8E-08 | 362 | 448 |
PF13650 | Asp_protease_2 | Aspartyl protease | 1.1E-06 | 491 | 575 |
PF13975 | gag-asp_proteas | gag-polyprotein putative aspartyl protease | 1.2E-06 | 491 | 578 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8979 MQEHQRALPPLSFDSTSLWIPNGWFKLAAEMLIDHRMGSAKTRSPMASEELKNACEDALKAIAREATCMGRIVQK GGSIGFETTEELWMMERRSPKTSDPLSWYSGFLETVHRISQPSPSVLAGTGRLCLWFSLKNLLESGKSADDETTK IQTHSCSSQREFLEFFPADEHQPMSPNWKPRLRRLRSTPIQSFSPKTPSPMNFKDRELTKSDNDRTQGLTDLFDL LFTFFPADDETTKIQTHSYSSQIKSSEFFPVDKYQPIRPHWNPRLRRLRSTPIQSFSPKTPSPINPKDRELTKSD NNATQGLKVVLDKASAVMDLSLLQLAKVSSSLAGFVESPSKDSRPSSQVSSVLPSGIKRRYVKGMVNGAPVEAVP DTGADLCFISPHLVSGLGLSPNLSTQKEIRLPNRKVIQSPGCVMVPWRFAGERETHRLDCWILPGVHDLVLGGYF LKATQTLTKFVRRLKSKIFPLPGRFRLDLLGEESQRLLGYLDGHPTSALPDTGSDLMVISGAYARKLGLTIDRDR TNWLEVEFGDGTTDWTSGVVRDVPWQVGGKTARCDFHVLDDLCVDVILSQSYLFETKAFLENGHCFFDADSEEVL YHLCGIRLLGRYGDALETLEEEYFFDVASPDVFSTEMVQRELARRDRIRDVIAALHEKQREAAARAEEERKRRWQ DLRETHRARLAGQTPASPGSAERDSARRSQKHSRRGHIPGGPGRRGEAAAPFEGVALWRASWKERVGKSIFLRS* |
Coding | >Hirsu2|8979 ATGCAAGAACACCAAAGGGCTTTACCGCCCCTGAGCTTTGACTCGACGTCACTATGGATTCCAAACGGCTGGTTC AAGCTTGCTGCAGAAATGTTGATTGATCATAGAATGGGTTCGGCAAAAACCAGGTCACCTATGGCTTCCGAGGAG TTGAAAAACGCATGCGAAGACGCACTGAAAGCGATAGCGCGGGAAGCCACATGCATGGGCCGAATTGTACAGAAG GGCGGAAGCATAGGGTTCGAAACAACTGAGGAACTCTGGATGATGGAGAGACGTTCTCCGAAGACTTCAGATCCT CTGTCGTGGTATTCTGGATTCCTTGAGACCGTGCATCGAATTTCGCAGCCGTCTCCGTCGGTTCTTGCCGGAACG GGTCGGCTGTGTTTGTGGTTCTCGTTAAAAAACCTTCTTGAGTCGGGCAAGTCAGCGGACGACGAAACCACGAAA ATCCAGACACACTCATGTTCTTCGCAGAGGGAGTTTTTAGAGTTTTTCCCGGCGGATGAACATCAGCCTATGAGT CCGAATTGGAAGCCCCGTCTGCGCCGTCTGCGGTCGACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCC ATGAATTTCAAGGACAGAGAGTTGACCAAGTCAGACAATGACAGGACACAGGGATTAACAGACCTATTTGACCTA TTGTTTACGTTCTTTCCAGCGGACGACGAAACCACGAAAATCCAGACACACTCATATTCTTCGCAGATTAAGTCT TCCGAGTTTTTCCCGGTAGATAAATATCAGCCTATACGTCCGCATTGGAATCCCCGTCTACGCCGTCTACGGTCG ACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCTATAAATCCCAAGGACAGAGAGTTAACCAAGTCAGAC AATAACGCGACACAGGGATTAAAAGTCGTATTGGACAAGGCCAGCGCCGTAATGGATTTATCTCTATTACAACTC GCCAAAGTGTCTTCGTCTTTGGCAGGCTTTGTTGAATCTCCGTCAAAAGATTCACGGCCTTCATCGCAAGTTTCT TCGGTGCTTCCTTCCGGAATCAAGCGTCGTTATGTCAAAGGGATGGTAAACGGGGCTCCGGTAGAAGCTGTCCCA GACACGGGTGCGGACTTGTGCTTCATATCGCCGCATCTGGTCTCTGGCCTCGGCCTCAGCCCTAATCTTTCGACA CAAAAGGAGATACGCCTGCCGAATCGCAAAGTCATCCAATCTCCTGGTTGCGTCATGGTTCCGTGGAGGTTCGCC GGGGAGAGAGAGACACACAGGCTAGACTGCTGGATTCTCCCGGGCGTCCACGATCTTGTCCTGGGGGGCTATTTC CTCAAGGCGACACAGACACTCACCAAATTTGTTCGCCGCCTCAAGTCAAAAATTTTTCCATTACCAGGGCGGTTT CGGCTAGATCTTCTGGGCGAGGAGAGCCAACGGCTGCTGGGATACCTGGACGGTCACCCCACCAGCGCATTGCCG GACACTGGGTCGGATCTGATGGTCATCTCGGGTGCCTATGCTCGCAAGCTTGGCTTAACCATCGACCGGGACCGT ACGAACTGGCTCGAAGTCGAATTCGGAGACGGGACCACCGACTGGACAAGTGGCGTTGTACGAGATGTACCGTGG CAGGTTGGCGGGAAGACGGCTCGATGCGACTTCCACGTGCTCGATGACCTCTGCGTCGATGTTATCCTAAGCCAA AGCTACCTGTTTGAGACCAAAGCGTTCCTAGAGAATGGCCATTGCTTCTTCGACGCCGACTCTGAGGAGGTGCTC TACCATCTGTGCGGCATCCGACTCCTTGGCCGCTACGGCGACGCCCTGGAAACGCTCGAGGAAGAGTATTTTTTC GATGTGGCTTCTCCAGATGTCTTCAGTACCGAAATGGTCCAAAGAGAGTTGGCAAGGCGAGACCGAATCCGGGAC GTGATAGCGGCTTTGCACGAGAAACAACGCGAAGCAGCCGCTCGAGCTGAGGAGGAGAGAAAGCGTCGGTGGCAG GACTTGAGAGAAACTCACAGAGCAAGGTTAGCGGGCCAAACACCGGCGTCCCCAGGTTCAGCTGAGCGTGACAGC GCCCGTCGATCCCAGAAGCACAGTCGTCGAGGGCACATTCCGGGAGGCCCTGGACGCCGGGGTGAGGCCGCAGCC CCCTTTGAAGGAGTTGCCCTCTGGAGGGCTTCATGGAAAGAAAGGGTCGGCAAATCTATTTTCCTGCGGTCCTGA |
Transcript | >Hirsu2|8979 ATGCAAGAACACCAAAGGGCTTTACCGCCCCTGAGCTTTGACTCGACGTCACTATGGATTCCAAACGGCTGGTTC AAGCTTGCTGCAGAAATGTTGATTGATCATAGAATGGGTTCGGCAAAAACCAGGTCACCTATGGCTTCCGAGGAG TTGAAAAACGCATGCGAAGACGCACTGAAAGCGATAGCGCGGGAAGCCACATGCATGGGCCGAATTGTACAGAAG GGCGGAAGCATAGGGTTCGAAACAACTGAGGAACTCTGGATGATGGAGAGACGTTCTCCGAAGACTTCAGATCCT CTGTCGTGGTATTCTGGATTCCTTGAGACCGTGCATCGAATTTCGCAGCCGTCTCCGTCGGTTCTTGCCGGAACG GGTCGGCTGTGTTTGTGGTTCTCGTTAAAAAACCTTCTTGAGTCGGGCAAGTCAGCGGACGACGAAACCACGAAA ATCCAGACACACTCATGTTCTTCGCAGAGGGAGTTTTTAGAGTTTTTCCCGGCGGATGAACATCAGCCTATGAGT CCGAATTGGAAGCCCCGTCTGCGCCGTCTGCGGTCGACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCC ATGAATTTCAAGGACAGAGAGTTGACCAAGTCAGACAATGACAGGACACAGGGATTAACAGACCTATTTGACCTA TTGTTTACGTTCTTTCCAGCGGACGACGAAACCACGAAAATCCAGACACACTCATATTCTTCGCAGATTAAGTCT TCCGAGTTTTTCCCGGTAGATAAATATCAGCCTATACGTCCGCATTGGAATCCCCGTCTACGCCGTCTACGGTCG ACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCTATAAATCCCAAGGACAGAGAGTTAACCAAGTCAGAC AATAACGCGACACAGGGATTAAAAGTCGTATTGGACAAGGCCAGCGCCGTAATGGATTTATCTCTATTACAACTC GCCAAAGTGTCTTCGTCTTTGGCAGGCTTTGTTGAATCTCCGTCAAAAGATTCACGGCCTTCATCGCAAGTTTCT TCGGTGCTTCCTTCCGGAATCAAGCGTCGTTATGTCAAAGGGATGGTAAACGGGGCTCCGGTAGAAGCTGTCCCA GACACGGGTGCGGACTTGTGCTTCATATCGCCGCATCTGGTCTCTGGCCTCGGCCTCAGCCCTAATCTTTCGACA CAAAAGGAGATACGCCTGCCGAATCGCAAAGTCATCCAATCTCCTGGTTGCGTCATGGTTCCGTGGAGGTTCGCC GGGGAGAGAGAGACACACAGGCTAGACTGCTGGATTCTCCCGGGCGTCCACGATCTTGTCCTGGGGGGCTATTTC CTCAAGGCGACACAGACACTCACCAAATTTGTTCGCCGCCTCAAGTCAAAAATTTTTCCATTACCAGGGCGGTTT CGGCTAGATCTTCTGGGCGAGGAGAGCCAACGGCTGCTGGGATACCTGGACGGTCACCCCACCAGCGCATTGCCG GACACTGGGTCGGATCTGATGGTCATCTCGGGTGCCTATGCTCGCAAGCTTGGCTTAACCATCGACCGGGACCGT ACGAACTGGCTCGAAGTCGAATTCGGAGACGGGACCACCGACTGGACAAGTGGCGTTGTACGAGATGTACCGTGG CAGGTTGGCGGGAAGACGGCTCGATGCGACTTCCACGTGCTCGATGACCTCTGCGTCGATGTTATCCTAAGCCAA AGCTACCTGTTTGAGACCAAAGCGTTCCTAGAGAATGGCCATTGCTTCTTCGACGCCGACTCTGAGGAGGTGCTC TACCATCTGTGCGGCATCCGACTCCTTGGCCGCTACGGCGACGCCCTGGAAACGCTCGAGGAAGAGTATTTTTTC GATGTGGCTTCTCCAGATGTCTTCAGTACCGAAATGGTCCAAAGAGAGTTGGCAAGGCGAGACCGAATCCGGGAC GTGATAGCGGCTTTGCACGAGAAACAACGCGAAGCAGCCGCTCGAGCTGAGGAGGAGAGAAAGCGTCGGTGGCAG GACTTGAGAGAAACTCACAGAGCAAGGTTAGCGGGCCAAACACCGGCGTCCCCAGGTTCAGCTGAGCGTGACAGC GCCCGTCGATCCCAGAAGCACAGTCGTCGAGGGCACATTCCGGGAGGCCCTGGACGCCGGGGTGAGGCCGCAGCC CCCTTTGAAGGAGTTGCCCTCTGGAGGGCTTCATGGAAAGAAAGGGTCGGCAAATCTATTTTCCTGCGGTCCTGA |
Gene | >Hirsu2|8979 ATGCAAGAACACCAAAGGGCTTTACCGCCCCTGAGCTTTGACTCGACGTCACTATGGATTCCAAACGGCTGGTTC AAGCTTGCTGCAGAAATGTTGATTGATCATAGAATGGGTTCGGCAAAAACCAGGTCACCTATGGCTTCCGAGGAG TTGAAAAACGCATGCGAAGACGCACTGAAAGCGATAGCGCGGGAAGCCACATGCATGGGCCGAATTGTACAGAAG GGCGGAAGCATAGGGTTCGAAACAACTGAGGAACTCTGGATGATGGAGAGACGTTCTCCGAAGACTTCAGATCCT CTGTCGTGGTATTCTGGATTCCTTGAGACCGTGCATCGAATTTCGCAGCCGTCTCCGTCGGTTCTTGCCGGAACG GGTCGGCTGTGTTTGTGGTTCTCGTTAAAAAACCTTCTTGAGTCGGGCAAGTCAGCGGACGACGAAACCACGAAA ATCCAGACACACTCATGTTCTTCGCAGAGGGAGTTTTTAGAGTTTTTCCCGGCGGATGAACATCAGCCTATGAGT CCGAATTGGAAGCCCCGTCTGCGCCGTCTGCGGTCGACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCC ATGAATTTCAAGGACAGAGAGTTGACCAAGTCAGACAATGACAGGACACAGGGATTAACAGACCTATTTGACCTA TTGTTTACGTTCTTTCCAGCGGACGACGAAACCACGAAAATCCAGACACACTCATATTCTTCGCAGATTAAGTCT TCCGAGTTTTTCCCGGTAGATAAATATCAGCCTATACGTCCGCATTGGAATCCCCGTCTACGCCGTCTACGGTCG ACTCCTATCCAAAGCTTTTCGCCAAAGACCCCTTCGCCTATAAATCCCAAGGACAGAGAGTTAACCAAGTCAGAC AATAACGCGACACAGGGATTAAAAGTCGTATTGGACAAGGCCAGCGCCGTAATGGATTTATCTCTATTACAACTC GCCAAAGTGTCTTCGTCTTTGGCAGGCTTTGTTGAATCTCCGTCAAAAGATTCACGGCCTTCATCGCAAGTTTCT TCGGTGCTTCCTTCCGGAATCAAGCGTCGTTATGTCAAAGGGATGGTAAACGGGGCTCCGGTAGAAGCTGTCCCA GACACGGGTGCGGACTTGTGCTTCATATCGCCGCATCTGGTCTCTGGCCTCGGCCTCAGCCCTAATCTTTCGACA CAAAAGGAGATACGCCTGCCGAATCGCAAAGTCATCCAATCTCCTGGTTGCGTCATGGTTCCGTGGAGGTTCGCC GGGGAGAGAGAGACACACAGGCTAGACTGCTGGATTCTCCCGGGCGTCCACGATCTTGTCCTGGGGGGCTATTTC CTCAAGGCGACACAGACACTCACCAAATTTGTTCGCCGCCTCAAGTCAAAAATTTTTCCATTACCAGGGCGGTTT CGGCTAGATCTTCTGGGCGAGGAGAGCCAACGGCTGCTGGGATACCTGGACGGTCACCCCACCAGCGCATTGCCG GACACTGGGTCGGATCTGATGGTCATCTCGGGTGCCTATGCTCGCAAGCTTGGCTTAACCATCGACCGGGACCGT ACGAACTGGCTCGAAGTCGAATTCGGAGACGGGACCACCGACTGGACAAGTGGCGTTGTACGAGATGTACCGTGG CAGGTTGGCGGGAAGACGGCTCGATGCGACTTCCACGTGCTCGATGACCTCTGCGTCGATGTTATCCTAAGCCAA AGCTACCTGTTTGAGACCAAAGCGTTCCTAGAGAATGGCCATTGCTTCTTCGACGCCGACTCTGAGGAGGTGCTC TACCATCTGTGCGGCATCCGACTCCTTGGCCGCTACGGCGACGCCCTGGAAACGCTCGAGGAAGAGTATTTTTTC GATGGTAAGCGTCGCCTATGAGATGAAGAAGCTTTTGACTGACGGGAGCAGTGGCTTCTCCAGATGTCTTCAGTA CCGAAATGGTCCAAAGAGAGTTGGCAAGGCGAGACCGAATCCGGGACGTGATAGCGGCTTTGCACGAGAAACAAC GCGAAGCAGCCGCTCGAGCTGAGGAGGAGAGAAAGCGTCGGTGGCAGGACTTGAGAGAAACTCACAGAGCAAGGT TAGCGGGCCAAACACCGGCGTCCCCAGGTTCAGCTGAGCGTGACAGCGCCCGTCGATCCCAGAAGCACAGTCGTC GAGGGCACATTCCGGGAGGCCCTGGACGCCGGGGTGAGGCCGCAGCCCCCTTTGAAGGAGTTGCCCTCTGGAGGG CTTCATGGAAAGAAAGGGTCGGCAAATCTATTTTCCTGCGGTCCTGA |