Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8953
Gene name
LocationContig_617:14101..15106
Strand+
Gene length (bp)1005
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.9E-08 233 276

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8953
MRHSGVRGVAAALLFSRAAFALSLWTSADAIPAGVPEACRKALARDIACGDSLVTAAQALSGRALGRGAAARYCT
QACHDSLQAFRAEVEQHCGDAAHRMFPNSSLEQSGAVLASGLLWAYSLTCIRDSSGFCLEELYNGTREACSQCAL
QYGTVMAGSPWGQGAVSRESFSSLLSSCGSDPTSYSIPPPQASSPHGSPSLSAPDAGMHEPADAAGGRAGTKAAS
PACSGETYIVREGDTCVSIASAAGVATDRMIDLNRLDYDCSALAVGMKLCLQDACATHTVMANETCSSITKGREF
SGIQLRSWNP*
Coding >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTC
CAGTACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTG
TCCTCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCC
CTGTCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCG
CCGGCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTG
GCTACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGC
CTGCAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTC
TCCGGGATCCAGCTCCGGTCCTGGAATCCGTGA
Transcript >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTC
CAGTACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTG
TCCTCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCC
CTGTCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCG
CCGGCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTG
GCTACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGC
CTGCAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTC
TCCGGGATCCAGCTCCGGTCCTGGAATCCGTGA
Gene >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTGAGACGTCATCCCGGCCGCAACCGCCATCCCAACCCGCCCGGTAACTGAAGACTAACACGGT
CGGCCTAGGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTCCAG
TACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTGTCC
TCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCCCTG
TCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCGCCG
GCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTGGCT
ACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGCCTG
CAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTCTCC
GGGATCCAGCTCCGGTCCTGGAATCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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