Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8953
Gene name
LocationContig_617:14101..15106
Strand+
Gene length (bp)1005
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.9E-08 233 276

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.155 0.0752 0.9418 0.1924 0.1446 0.0288 0.2687 0.3188 0.2808 0.0054

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.992143

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup721
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2604
Ophiocordyceps australis 1348a (Ghana) OphauG2|2724
Ophiocordyceps australis map64 (Brazil) OphauB2|3492
Ophiocordyceps subramaniannii Hirsu2|1709
Ophiocordyceps subramaniannii Hirsu2|6611
Ophiocordyceps subramaniannii Hirsu2|8953 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8953
MRHSGVRGVAAALLFSRAAFALSLWTSADAIPAGVPEACRKALARDIACGDSLVTAAQALSGRALGRGAAARYCT
QACHDSLQAFRAEVEQHCGDAAHRMFPNSSLEQSGAVLASGLLWAYSLTCIRDSSGFCLEELYNGTREACSQCAL
QYGTVMAGSPWGQGAVSRESFSSLLSSCGSDPTSYSIPPPQASSPHGSPSLSAPDAGMHEPADAAGGRAGTKAAS
PACSGETYIVREGDTCVSIASAAGVATDRMIDLNRLDYDCSALAVGMKLCLQDACATHTVMANETCSSITKGREF
SGIQLRSWNP*
Coding >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTC
CAGTACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTG
TCCTCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCC
CTGTCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCG
CCGGCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTG
GCTACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGC
CTGCAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTC
TCCGGGATCCAGCTCCGGTCCTGGAATCCGTGA
Transcript >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTC
CAGTACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTG
TCCTCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCC
CTGTCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCG
CCGGCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTG
GCTACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGC
CTGCAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTC
TCCGGGATCCAGCTCCGGTCCTGGAATCCGTGA
Gene >Hirsu2|8953
ATGCGGCACTCTGGAGTCCGGGGCGTCGCCGCCGCCCTGCTCTTCTCCAGAGCCGCGTTCGCCCTCAGCCTCTGG
ACATCCGCCGACGCCATCCCGGCCGGCGTCCCGGAAGCATGCCGCAAAGCGTTGGCGCGCGACATCGCCTGCGGC
GACAGCCTCGTCACGGCCGCTCAGGCGCTGAGCGGGAGAGCCCTTGGTCGCGGTGCGGCGGCGCGGTATTGCACC
CAGGCCTGTCACGACTCGCTCCAGGCGTTCCGGGCCGAGGTCGAGCAGCACTGTGGCGACGCGGCTCATCGCATG
TTCCCCAATAGCAGCCTCGAGCAGTCTGGTGCTGTGCTGGCAAGCGGGCTGCTGTGGGCGTACAGCCTCACTTGC
ATCCGCGACTCGTGAGACGTCATCCCGGCCGCAACCGCCATCCCAACCCGCCCGGTAACTGAAGACTAACACGGT
CGGCCTAGGTCCGGCTTCTGCCTGGAAGAGCTGTACAACGGCACCAGGGAGGCGTGCTCGCAGTGTGCTCTCCAG
TACGGCACCGTCATGGCCGGCTCCCCCTGGGGACAGGGGGCCGTCAGTCGAGAGTCTTTCTCGTCCCTGCTGTCC
TCGTGTGGCTCCGACCCGACGAGCTACTCGATCCCGCCGCCACAGGCGTCGTCACCACATGGAAGCCCCTCCCTG
TCGGCCCCGGACGCGGGAATGCATGAGCCGGCCGACGCGGCCGGTGGAAGAGCAGGCACCAAAGCAGCGTCGCCG
GCCTGCTCGGGCGAGACGTATATCGTCCGGGAGGGCGACACGTGCGTCTCCATCGCCAGCGCCGCGGGAGTGGCT
ACGGATCGGATGATCGACCTCAACCGCCTCGACTACGACTGCTCAGCCCTCGCGGTCGGCATGAAGCTGTGCCTG
CAGGACGCATGCGCCACCCACACGGTCATGGCAAACGAGACTTGCTCCAGCATTACGAAGGGAAGGGAATTCTCC
GGGATCCAGCTCCGGTCCTGGAATCCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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