Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8944
Gene name
LocationContig_616:3396..4276
Strand+
Gene length (bp)880
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0884 0.0496 0.876 0.381 0.0954 0.0056 0.2866 0.0744 0.3164 0.0014

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.99957

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4350
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3922
Ophiocordyceps australis map64 (Brazil) OphauB2|6302
Ophiocordyceps camponoti-floridani Ophcf2|02458
Ophiocordyceps camponoti-rufipedis Ophun1|3748
Ophiocordyceps kimflemingae Ophio5|4700
Ophiocordyceps subramaniannii Hirsu2|8944 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8944
MRPDFAFVLFSLLGTAAAAAIDGLQTADTINAEEWHVNDLFKRRGGGGSGGRGGGSSGGGGSGGRGGGGNSGGGG
SSGGRPSGSRGNTGSGSNLGGTSRGGTGPTPRFGGGRFYGGGATRPYRAGAASPAGIAPFLLVGAALAFWPGVWL
HGAHAYPYSYVHRFHNATTDKNETAKVLCACAEFAECGCDENNSTAYYNDLIGNGSYEALNKSVVNVGDVRGEKT
LLINGTLPNGTTADGPDSSAFGSGLTSLVEAAGYWPVVATVAAAVFLI*
Coding >Hirsu2|8944
ATGCGACCCGACTTCGCCTTTGTCCTTTTCTCGCTGCTCGGCACTGCGGCTGCGGCGGCCATCGACGGGCTCCAG
ACTGCCGACACCATCAACGCCGAAGAATGGCATGTTAACGATCTTTTCAAGCGTCGCGGCGGCGGCGGCAGCGGC
GGAAGAGGAGGTGGAAGCAGCGGTGGCGGCGGCAGTGGCGGTCGGGGTGGCGGCGGCAACTCCGGCGGCGGCGGC
AGCTCCGGCGGCAGACCTTCCGGATCGAGAGGAAACACAGGTTCCGGCTCCAACCTCGGAGGCACCTCTCGCGGC
GGCACCGGCCCGACCCCGCGCTTCGGCGGCGGTCGCTTCTACGGAGGCGGCGCAACCCGGCCGTACCGAGCCGGT
GCCGCCAGTCCCGCCGGAATCGCTCCCTTCCTCCTCGTCGGCGCCGCCTTGGCCTTCTGGCCCGGCGTCTGGCTG
CATGGGGCACACGCGTACCCGTACTCTTACGTTCACCGCTTCCACAACGCCACCACTGATAAGAATGAAACGGCC
AAGGTCCTATGCGCCTGCGCCGAGTTCGCCGAGTGCGGCTGCGACGAGAACAACAGCACCGCCTACTACAACGAT
CTTATCGGAAACGGCAGCTACGAAGCTCTCAATAAGAGCGTTGTCAACGTCGGCGACGTTCGCGGCGAGAAAACG
CTCCTCATCAACGGCACCCTCCCCAACGGCACCACGGCCGACGGCCCCGACTCCTCTGCCTTCGGCTCCGGCCTG
ACGAGCCTGGTCGAGGCCGCGGGCTACTGGCCCGTCGTTGCCACTGTCGCGGCCGCCGTCTTCCTTATTTAA
Transcript >Hirsu2|8944
ATGCGACCCGACTTCGCCTTTGTCCTTTTCTCGCTGCTCGGCACTGCGGCTGCGGCGGCCATCGACGGGCTCCAG
ACTGCCGACACCATCAACGCCGAAGAATGGCATGTTAACGATCTTTTCAAGCGTCGCGGCGGCGGCGGCAGCGGC
GGAAGAGGAGGTGGAAGCAGCGGTGGCGGCGGCAGTGGCGGTCGGGGTGGCGGCGGCAACTCCGGCGGCGGCGGC
AGCTCCGGCGGCAGACCTTCCGGATCGAGAGGAAACACAGGTTCCGGCTCCAACCTCGGAGGCACCTCTCGCGGC
GGCACCGGCCCGACCCCGCGCTTCGGCGGCGGTCGCTTCTACGGAGGCGGCGCAACCCGGCCGTACCGAGCCGGT
GCCGCCAGTCCCGCCGGAATCGCTCCCTTCCTCCTCGTCGGCGCCGCCTTGGCCTTCTGGCCCGGCGTCTGGCTG
CATGGGGCACACGCGTACCCGTACTCTTACGTTCACCGCTTCCACAACGCCACCACTGATAAGAATGAAACGGCC
AAGGTCCTATGCGCCTGCGCCGAGTTCGCCGAGTGCGGCTGCGACGAGAACAACAGCACCGCCTACTACAACGAT
CTTATCGGAAACGGCAGCTACGAAGCTCTCAATAAGAGCGTTGTCAACGTCGGCGACGTTCGCGGCGAGAAAACG
CTCCTCATCAACGGCACCCTCCCCAACGGCACCACGGCCGACGGCCCCGACTCCTCTGCCTTCGGCTCCGGCCTG
ACGAGCCTGGTCGAGGCCGCGGGCTACTGGCCCGTCGTTGCCACTGTCGCGGCCGCCGTCTTCCTTATTTAA
Gene >Hirsu2|8944
ATGCGACCCGACTTCGCCTTTGTCCTTTTCTCGCTGCTCGGCACTGCGGCTGCGGCGGCCATCGACGGGCTCCAG
ACTGCCGACACCATCAACGCCGAAGAATGGCATGTTAACGATCTTTTCAAGCGTCGCGGCGGCGGCGGCAGCGGC
GGAAGAGGAGGTGGAAGCAGCGGTGGCGGCGGCAGTGGCGGTCGGGGTGGCGGCGGCAACTCCGGCGGCGGCGGC
AGCTCCGGCGGCAGACCTTCCGGATCGTAAGTCCCCGCTTTGGCCCCCCATACTCCTCTCTACCGCTAACAAATG
AGGACGCAGGAGAGGAAACACAGGTTCCGGCTCCAACCTCGGAGGCACCTCTCGCGGCGGCACCGGCCCGACCCC
GCGCTTCGGCGGCGGTCGCTTCTACGGAGGCGGCGCAACCCGGCCGTACCGAGCCGGTGCCGCCAGTCCCGCCGG
AATCGCTCCCTTCCTCCTCGTCGGCGCCGCCTTGGCCTTCTGGCCCGGCGTCTGGCTGCATGGGGCACACGCGTA
CCCGTACTCTTACGTTCACCGCTTCCACAACGCCACCACTGATAAGAATGAAACGGCCAAGGTCCTATGCGCCTG
CGCCGAGTTCGCCGAGTGCGGCTGCGACGAGAACAACAGCACCGCCTACTACAACGATCTTATCGGAAACGGCAG
CTACGAAGCTCTCAATAAGAGCGTTGTCAACGTCGGCGACGTTCGCGGCGAGAAAACGCTCCTCATCAACGGCAC
CCTCCCCAACGGCACCACGGCCGACGGCCCCGACTCCTCTGCCTTCGGCTCCGGCCTGACGAGCCTGGTCGAGGC
CGCGGGCTACTGGCCCGTCGTTGCCACTGTCGCGGCCGCCGTCTTCCTTATTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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