Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8928
Gene name
LocationContig_614:35..735
Strand-
Gene length (bp)700
Transcript length (bp)567
Coding sequence length (bp)567
Protein length (aa) 189

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 30 20
2 43 65 22
3 93 115 22
4 122 144 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8928
MAGVSGMQSFCVQLSLLVLSLIFTGLRLYVRAVMARTMTADDWSIVVATVLFAGVVSGTMRGATAGAMGQAGGDG
ASAARKRASLQGVYFCEALWPPLSLAVRLSVCLFLLRIVRERGQRRALHALLAAVAAASLAYLLLLLLRCWPPSG
AASRTGPCWPPASSTAPSRPCRPSSSACCPSPSCGGCG*
Coding >Hirsu2|8928
ATGGCCGGCGTGTCCGGCATGCAGTCCTTCTGCGTCCAGCTGTCGCTGCTGGTCCTCTCGCTCATCTTCACCGGC
CTGCGGCTCTACGTCCGGGCCGTCATGGCCAGGACCATGACGGCGGACGACTGGTCCATCGTCGTCGCCACGGTC
CTGTTCGCGGGCGTGGTTTCCGGCACGATGCGCGGCGCGACGGCCGGGGCTATGGGCCAGGCCGGCGGCGACGGC
GCGTCGGCGGCGCGGAAGCGCGCCTCGCTGCAGGGCGTCTACTTCTGCGAGGCGCTGTGGCCGCCGCTCTCGCTG
GCGGTCCGCCTGTCCGTCTGCCTGTTCCTGCTGCGGATCGTGCGGGAGCGCGGCCAGCGGCGGGCGCTGCACGCG
CTGCTGGCCGCCGTCGCGGCCGCCTCGCTCGCCTACCTGCTGCTGCTGCTGCTGCGCTGCTGGCCGCCGTCGGGC
GCTGCCTCCCGGACCGGGCCCTGCTGGCCGCCGGCCTCGTCCACGGCTCCGTCTCGGCCCTGTCGGCCTTCGTCG
TCGGCGTGCTGCCCGTCGCCGTCCTGTGGCGGCTGCGGATGA
Transcript >Hirsu2|8928
ATGGCCGGCGTGTCCGGCATGCAGTCCTTCTGCGTCCAGCTGTCGCTGCTGGTCCTCTCGCTCATCTTCACCGGC
CTGCGGCTCTACGTCCGGGCCGTCATGGCCAGGACCATGACGGCGGACGACTGGTCCATCGTCGTCGCCACGGTC
CTGTTCGCGGGCGTGGTTTCCGGCACGATGCGCGGCGCGACGGCCGGGGCTATGGGCCAGGCCGGCGGCGACGGC
GCGTCGGCGGCGCGGAAGCGCGCCTCGCTGCAGGGCGTCTACTTCTGCGAGGCGCTGTGGCCGCCGCTCTCGCTG
GCGGTCCGCCTGTCCGTCTGCCTGTTCCTGCTGCGGATCGTGCGGGAGCGCGGCCAGCGGCGGGCGCTGCACGCG
CTGCTGGCCGCCGTCGCGGCCGCCTCGCTCGCCTACCTGCTGCTGCTGCTGCTGCGCTGCTGGCCGCCGTCGGGC
GCTGCCTCCCGGACCGGGCCCTGCTGGCCGCCGGCCTCGTCCACGGCTCCGTCTCGGCCCTGTCGGCCTTCGTCG
TCGGCGTGCTGCCCGTCGCCGTCCTGTGGCGGCTGCGGATGA
Gene >Hirsu2|8928
ATGGCCGGCGTGTCCGGCATGCAGTCCTTCTGCGTCCAGCTGTCGCTGCTGGTCCTCTCGCTCATCTTCACCGGC
CTGCGGCTCTACGTCCGGGCCGTCATGGCCAGGACCATGACGGCGGACGACTGGTCCATCGTCGTCGCCACGGTG
CCGCCCCCTTTTTTTTTTCTCTTTCTCTTGGCTTTTTCTTTTCCTTGTCTCTTTCCATCCTTCTCTGTTCTCCGA
ATCGACTGACCGAGACAGGTCCTGTTCGCGGGCGTGGTTTCCGGCACGATGCGCGGCGCGACGGCCGGGGCTATG
GGCCAGGCCGGCGGCGACGGCGCGTCGGCGGCGCGGAAGCGCGCCTCGCTGCAGGGCGTCTACTTCTGCGAGGCG
CTGTGGCCGCCGCTCTCGCTGGCGGTCCGCCTGTCCGTCTGCCTGTTCCTGCTGCGGATCGTGCGGGAGCGCGGC
CAGCGGCGGGCGCTGCACGCGCTGCTGGCCGCCGTCGCGGCCGCCTCGCTCGCCTACCTGCTGCTGCTGCTGCTG
CGCTGCTGGCCGCCGTCGTACTTTTGGGACCGGGCCGTGCCGGGCGCCGCCGAGGGGCGCTGCCTCCCGGACCGG
GCCCTGCTGGCCGCCGGCCTCGTCCACGGCTCCGTCTCGGCCCTGTCGGCCTTCGTCGTCGGCGTGCTGCCCGTC
GCCGTCCTGTGGCGGCTGCGGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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